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The map label for this gene is amaB [H]

Identifier: 16126840

GI number: 16126840

Start: 2813074

End: 2814357

Strand: Direct

Name: amaB [H]

Synonym: CC_2603

Alternate gene names: 16126840

Gene position: 2813074-2814357 (Clockwise)

Preceding gene: 16126838

Following gene: 16126841

Centisome position: 70.03

GC content: 71.34

Gene sequence:

>1284_bases
GTGGCGGACGGTGTCGACATCGGGGTGAGGGCCAAGGCGCGTTGCGACGCCCTGGGGTCGCCGCCTTACAGTGAGATCGA
CGGCCAACTGACCCGCCGCTTCCTGACGGCCGCCCACGGCGCTGCGCTGGACGCCCTCGCGGGATGGATGGCTGAAGCCG
GCATGAGCGCCCGCCGAGACGCCGCCGCCAACCTGATCGGCCGCTACGAGGGCGAGACGCACGGCGCCAAGGCTCTGATC
ATCGGCTCGCATATCGACAGCGTCCGCAACGGCGGCCGCTATGACGGGCCGCTGGGGATCATGCTGGGGATCGACGTGGT
CGAGGCGCTGCATCGCGCCGGCCGCCGCCTGCCCTTCGCGATCGAGGTTGTGGCGTTCGGCGACGAGGAAGGCTCGCGCT
TCCCCGCCTCGATGAGCTGTAGTCGCGCGATCGCCGGAACCCTGGACGCCACCGCCCTGGAGATGAAGGACGCCGAAGGC
GTGTCAGTCGCCGAGGCGCTGGCCGCGTTCGGCGGCGATCCGGCCAACATCGCTTCGGCCGCCCGCCGTCCCGAGGAGGT
GCTCGCCTTCCTGGAAGCCCATATCGAGCAAGGCCCGGTGCTGGAGGCCGAAGGCCTGGCCCTGGGCGTCGTCACCGCCA
TCGCCGCTCAGAAGCGCTTGATGGTGCGGATCACGGGCATGGCCGGCCATGCCGGCACGACGCCGATGGCCTTGCGCAAG
GACCCCGGCCCCGCCGCCGCCGAGGCCATCCTGGCCCTGGAGCGGATCTGCCGCGCCGGAACCGACGGTCTGGTCGGCAC
GGTGGGACGCATGACCGCCTTGCCCGGCGCCTTCAACGTCATCCCCGGCGCGATTGAGTTCTCGATGGATATCCGCGCCG
AGACCTCGGCCACCCGCGACGCCGCCGTCGAGGCGATCACCGCTGAGATCCACGCCATCGCCGCCGCGCGAGACCTCTCC
GCCACCGTCACCCTGATGCAGGCCTTGGCCGAGAGCCCCTGCGATCCGTCGCTGATGGGCTTGCTGGACGAGAGCCTCGC
CGATCTTGGCCTGCCCGCCCGCCGCCTGCCCTCGGGCGCGGGTCACGACGCCATGGTGATGGCCGCGCTGTGCCCCACCG
CCATGCTGTTCATCCGCTGCGAAGGCGGGATCAGCCACAACCCGGCCGAGGCCGTCACCGAGGCCGACTGCGCCCTGGCG
GCCAAGGCGATGCTGGGGTTCGTGGAGAAGCTGGCCGCCAATCCCTTGCGTCCTTCGAGGCCGCTACGCGGCGCCTCAGG
ATGA

Upstream 100 bases:

>100_bases
TGCGCGGGCGCCCGGGCCGGTTGTCGACCCTGGCGGCTCGCAAAAGGGGACTTGGTCGCTCCGCCTGCTAGGGTGATGCG
ATCAAGGGCGCGGAGCGAAC

Downstream 100 bases:

>100_bases
GGGATTCTGTTCACCCCACCTTCCTCATCCTGAGGTGCGCGCCGCAGGCGGGCCTCGAAGGACGCACAGTGACCACCGCC
AAGACCATGCCATGACCGAC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MADGVDIGVRAKARCDALGSPPYSEIDGQLTRRFLTAAHGAALDALAGWMAEAGMSARRDAAANLIGRYEGETHGAKALI
IGSHIDSVRNGGRYDGPLGIMLGIDVVEALHRAGRRLPFAIEVVAFGDEEGSRFPASMSCSRAIAGTLDATALEMKDAEG
VSVAEALAAFGGDPANIASAARRPEEVLAFLEAHIEQGPVLEAEGLALGVVTAIAAQKRLMVRITGMAGHAGTTPMALRK
DPGPAAAEAILALERICRAGTDGLVGTVGRMTALPGAFNVIPGAIEFSMDIRAETSATRDAAVEAITAEIHAIAAARDLS
ATVTLMQALAESPCDPSLMGLLDESLADLGLPARRLPSGAGHDAMVMAALCPTAMLFIRCEGGISHNPAEAVTEADCALA
AKAMLGFVEKLAANPLRPSRPLRGASG

Sequences:

>Translated_427_residues
MADGVDIGVRAKARCDALGSPPYSEIDGQLTRRFLTAAHGAALDALAGWMAEAGMSARRDAAANLIGRYEGETHGAKALI
IGSHIDSVRNGGRYDGPLGIMLGIDVVEALHRAGRRLPFAIEVVAFGDEEGSRFPASMSCSRAIAGTLDATALEMKDAEG
VSVAEALAAFGGDPANIASAARRPEEVLAFLEAHIEQGPVLEAEGLALGVVTAIAAQKRLMVRITGMAGHAGTTPMALRK
DPGPAAAEAILALERICRAGTDGLVGTVGRMTALPGAFNVIPGAIEFSMDIRAETSATRDAAVEAITAEIHAIAAARDLS
ATVTLMQALAESPCDPSLMGLLDESLADLGLPARRLPSGAGHDAMVMAALCPTAMLFIRCEGGISHNPAEAVTEADCALA
AKAMLGFVEKLAANPLRPSRPLRGASG
>Mature_426_residues
ADGVDIGVRAKARCDALGSPPYSEIDGQLTRRFLTAAHGAALDALAGWMAEAGMSARRDAAANLIGRYEGETHGAKALII
GSHIDSVRNGGRYDGPLGIMLGIDVVEALHRAGRRLPFAIEVVAFGDEEGSRFPASMSCSRAIAGTLDATALEMKDAEGV
SVAEALAAFGGDPANIASAARRPEEVLAFLEAHIEQGPVLEAEGLALGVVTAIAAQKRLMVRITGMAGHAGTTPMALRKD
PGPAAAEAILALERICRAGTDGLVGTVGRMTALPGAFNVIPGAIEFSMDIRAETSATRDAAVEAITAEIHAIAAARDLSA
TVTLMQALAESPCDPSLMGLLDESLADLGLPARRLPSGAGHDAMVMAALCPTAMLFIRCEGGISHNPAEAVTEADCALAA
KAMLGFVEKLAANPLRPSRPLRGASG

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=406, Percent_Identity=34.4827586206897, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43825; Mature: 43694

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGVDIGVRAKARCDALGSPPYSEIDGQLTRRFLTAAHGAALDALAGWMAEAGMSARRD
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AAANLIGRYEGETHGAKALIIGSHIDSVRNGGRYDGPLGIMLGIDVVEALHRAGRRLPFA
HHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
IEVVAFGDEEGSRFPASMSCSRAIAGTLDATALEMKDAEGVSVAEALAAFGGDPANIASA
EEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH
ARRPEEVLAFLEAHIEQGPVLEAEGLALGVVTAIAAQKRLMVRITGMAGHAGTTPMALRK
HCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEC
DPGPAAAEAILALERICRAGTDGLVGTVGRMTALPGAFNVIPGAIEFSMDIRAETSATRD
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCHHH
AAVEAITAEIHAIAAARDLSATVTLMQALAESPCDPSLMGLLDESLADLGLPARRLPSGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCC
GHDAMVMAALCPTAMLFIRCEGGISHNPAEAVTEADCALAAKAMLGFVEKLAANPLRPSR
CCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PLRGASG
CCCCCCC
>Mature Secondary Structure 
ADGVDIGVRAKARCDALGSPPYSEIDGQLTRRFLTAAHGAALDALAGWMAEAGMSARRD
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AAANLIGRYEGETHGAKALIIGSHIDSVRNGGRYDGPLGIMLGIDVVEALHRAGRRLPFA
HHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
IEVVAFGDEEGSRFPASMSCSRAIAGTLDATALEMKDAEGVSVAEALAAFGGDPANIASA
EEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH
ARRPEEVLAFLEAHIEQGPVLEAEGLALGVVTAIAAQKRLMVRITGMAGHAGTTPMALRK
HCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEC
DPGPAAAEAILALERICRAGTDGLVGTVGRMTALPGAFNVIPGAIEFSMDIRAETSATRD
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCHHH
AAVEAITAEIHAIAAARDLSATVTLMQALAESPCDPSLMGLLDESLADLGLPARRLPSGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCC
GHDAMVMAALCPTAMLFIRCEGGISHNPAEAVTEADCALAAKAMLGFVEKLAANPLRPSR
CCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PLRGASG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]