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The map label for this gene is ydfG [C]

Identifier: 16126545

GI number: 16126545

Start: 2509369

End: 2510127

Strand: Direct

Name: ydfG [C]

Synonym: CC_2306

Alternate gene names: 16126545

Gene position: 2509369-2510127 (Clockwise)

Preceding gene: 16126544

Following gene: 16126546

Centisome position: 62.47

GC content: 69.17

Gene sequence:

>759_bases
ATGGACATCAAGGACAGCATCGTCCTGGTCACCGGCGGCAATCGCGGAATTGGCGAGGCCTTTGTGCGCGCCTTCCTCGC
GGCCGGCGCGACGAAGGTCTATGTCGGCGCCCGCGACCCGGCCAGCGCCGCGCACCTCGTCGCCGAGGCCCCGGACCGGG
TGACGGCCCTGCGGCTTGACGTCAGCGACGCGGAGACAATTTCAGCGGCGGCCGCGCAGTGCCCGGACGTGACGATCCTC
GTCAATAACGCGGGCGCTTTCACCATGCAGACCCTGATGGGCGCACAGGACATGAGCGCCGCCCGCCAGGAGATGGAGGT
CAACTATTTTGGCCCGCTGGCGATGAGCCGAGCCTTCGCGCCTATCCTGGCCAGGGCGCCGCGGAGCGCGATCGTCAACG
TGCTGTCGGCCGGCGGTCTTGTCGCCGTGCCCAGCATGGGCGGCTACAGTCCTTCGAAATTCGCCGCGCGCGCCATGACC
ACCTGCCTGCGCGCCGAACTGGCGCCCCAGAACACCCACGTGCTGGCGCTGAATGTCGGCTCGGTCGACACCCGTATGGC
CAGCCATGTCGAGGGCTTCAAGGAGGCGCCGGCCACGATCGCCCAGGCCGGCCTGAAGGCGCTGAAGCGCGAGGCGGACG
AGGTCGACACAGACTTCATGGCCATCGACGTCCGCGCCCATCTGGCCCGCGACCCCAAGGGCCTGGAACTGGCCATGCGA
CGCGCGCTGACCAGCGACCGCGTCAGCACCGGCCGTTAG

Upstream 100 bases:

>100_bases
CATAACAAGACCGTGGTGCTAGGCTTCCGCTAGACCGCCAGCGAACAGGGACGAAGAGCCCGGTCGCTCGTCGGGCTTCA
TGAGGGAGGAGACGGCGCCC

Downstream 100 bases:

>100_bases
GAGAGGTCCTTGTCTCAGATCGACTACGTCGCCTTCGCCCAGCGCTTTGTCGCCGCCATCCAGGCCGGCGACGCCGAGGC
CGTACGGGCCTTCTACGCCT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDIKDSIVLVTGGNRGIGEAFVRAFLAAGATKVYVGARDPASAAHLVAEAPDRVTALRLDVSDAETISAAAAQCPDVTIL
VNNAGAFTMQTLMGAQDMSAARQEMEVNYFGPLAMSRAFAPILARAPRSAIVNVLSAGGLVAVPSMGGYSPSKFAARAMT
TCLRAELAPQNTHVLALNVGSVDTRMASHVEGFKEAPATIAQAGLKALKREADEVDTDFMAIDVRAHLARDPKGLELAMR
RALTSDRVSTGR

Sequences:

>Translated_252_residues
MDIKDSIVLVTGGNRGIGEAFVRAFLAAGATKVYVGARDPASAAHLVAEAPDRVTALRLDVSDAETISAAAAQCPDVTIL
VNNAGAFTMQTLMGAQDMSAARQEMEVNYFGPLAMSRAFAPILARAPRSAIVNVLSAGGLVAVPSMGGYSPSKFAARAMT
TCLRAELAPQNTHVLALNVGSVDTRMASHVEGFKEAPATIAQAGLKALKREADEVDTDFMAIDVRAHLARDPKGLELAMR
RALTSDRVSTGR
>Mature_252_residues
MDIKDSIVLVTGGNRGIGEAFVRAFLAAGATKVYVGARDPASAAHLVAEAPDRVTALRLDVSDAETISAAAAQCPDVTIL
VNNAGAFTMQTLMGAQDMSAARQEMEVNYFGPLAMSRAFAPILARAPRSAIVNVLSAGGLVAVPSMGGYSPSKFAARAMT
TCLRAELAPQNTHVLALNVGSVDTRMASHVEGFKEAPATIAQAGLKALKREADEVDTDFMAIDVRAHLARDPKGLELAMR
RALTSDRVSTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=31.4720812182741, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI40548397, Length=207, Percent_Identity=28.0193236714976, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI214010158, Length=207, Percent_Identity=28.0193236714976, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI214010156, Length=207, Percent_Identity=28.0193236714976, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI22758144, Length=207, Percent_Identity=28.0193236714976, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI19743808, Length=213, Percent_Identity=29.1079812206573, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI142976729, Length=169, Percent_Identity=33.1360946745562, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI4504503, Length=196, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI150247226, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI223718074, Length=200, Percent_Identity=31.5, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI109715829, Length=225, Percent_Identity=32, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=197, Percent_Identity=32.48730964467, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17570069, Length=197, Percent_Identity=31.4720812182741, Blast_Score=87, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17559962, Length=205, Percent_Identity=27.3170731707317, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17542178, Length=156, Percent_Identity=30.1282051282051, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=191, Percent_Identity=30.8900523560209, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322067, Length=188, Percent_Identity=32.4468085106383, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643142, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=29.6875, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26368; Mature: 26368

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKDSIVLVTGGNRGIGEAFVRAFLAAGATKVYVGARDPASAAHLVAEAPDRVTALRLD
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEE
VSDAETISAAAAQCPDVTILVNNAGAFTMQTLMGAQDMSAARQEMEVNYFGPLAMSRAFA
CCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHCCCEECHHHHHHHHH
PILARAPRSAIVNVLSAGGLVAVPSMGGYSPSKFAARAMTTCLRAELAPQNTHVLALNVG
HHHHHCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
SVDTRMASHVEGFKEAPATIAQAGLKALKREADEVDTDFMAIDVRAHLARDPKGLELAMR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHH
RALTSDRVSTGR
HHHHHCCCCCCC
>Mature Secondary Structure
MDIKDSIVLVTGGNRGIGEAFVRAFLAAGATKVYVGARDPASAAHLVAEAPDRVTALRLD
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEE
VSDAETISAAAAQCPDVTILVNNAGAFTMQTLMGAQDMSAARQEMEVNYFGPLAMSRAFA
CCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHCCCEECHHHHHHHHH
PILARAPRSAIVNVLSAGGLVAVPSMGGYSPSKFAARAMTTCLRAELAPQNTHVLALNVG
HHHHHCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
SVDTRMASHVEGFKEAPATIAQAGLKALKREADEVDTDFMAIDVRAHLARDPKGLELAMR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHH
RALTSDRVSTGR
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA