Click here to switch to the map view.

The map label for this gene is ytfH [H]

Identifier: 16126079

GI number: 16126079

Start: 2030614

End: 2030946

Strand: Direct

Name: ytfH [H]

Synonym: CC_1836

Alternate gene names: 16126079

Gene position: 2030614-2030946 (Clockwise)

Preceding gene: 16126073

Following gene: 16126080

Centisome position: 50.55

GC content: 61.26

Gene sequence:

>333_bases
ATGCTGGATCTGATTGGCGGTAAGTGGGCGATCCTGATTCTGTGCTGCCTGCAACAGGGGCCCGTGCGCACAGGATCGCT
GATGCGTCAGATCGGCGGCATCTCGCAGAAGATGCTGACCCAAACCCTGCGGGATCTGGAGCAGAACGGATTTGTCGAGC
GGATCAGCTATCCCGAGGTCCCACCTCGGGTGGAGTATCGCCTGACTGAGCTGGGCCAATCGCTCAGCGCGCTTGCCCGC
ACCCTGGAGCAATGGGTTGTCGCCCACTATGAAACCATCCTGGCGCATCGAGACCAACGGCAGGACGAGGCGCGGATCGC
GCTGAGCCAATAA

Upstream 100 bases:

>100_bases
ATGCCCTATGGTTCCTGTTGGAAAGTACGCACCTTTTGGTAATATTTGAGTCATGTTCCTGCCGGCCAACCCCTATGACA
TGCGCTGCCCGTCGCGGGAG

Downstream 100 bases:

>100_bases
GGATTTCCGCTGAACTCGGCGTGGAATCTGCGTAACCGGATGGCGCGCCTCGGTTAAATCCACCCCACCAAGCAAAAAGG
GCTTCAGGACAAGCATGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLDLIGGKWAILILCCLQQGPVRTGSLMRQIGGISQKMLTQTLRDLEQNGFVERISYPEVPPRVEYRLTELGQSLSALAR
TLEQWVVAHYETILAHRDQRQDEARIALSQ

Sequences:

>Translated_110_residues
MLDLIGGKWAILILCCLQQGPVRTGSLMRQIGGISQKMLTQTLRDLEQNGFVERISYPEVPPRVEYRLTELGQSLSALAR
TLEQWVVAHYETILAHRDQRQDEARIALSQ
>Mature_110_residues
MLDLIGGKWAILILCCLQQGPVRTGSLMRQIGGISQKMLTQTLRDLEQNGFVERISYPEVPPRVEYRLTELGQSLSALAR
TLEQWVVAHYETILAHRDQRQDEARIALSQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=100, Percent_Identity=46, Blast_Score=98, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12519; Mature: 12519

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLIGGKWAILILCCLQQGPVRTGSLMRQIGGISQKMLTQTLRDLEQNGFVERISYPEV
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCC
PPRVEYRLTELGQSLSALARTLEQWVVAHYETILAHRDQRQDEARIALSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MLDLIGGKWAILILCCLQQGPVRTGSLMRQIGGISQKMLTQTLRDLEQNGFVERISYPEV
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCC
PPRVEYRLTELGQSLSALARTLEQWVVAHYETILAHRDQRQDEARIALSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]