| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is foxA [H]
Identifier: 16126022
GI number: 16126022
Start: 1961452
End: 1963650
Strand: Direct
Name: foxA [H]
Synonym: CC_1778
Alternate gene names: 16126022
Gene position: 1961452-1963650 (Clockwise)
Preceding gene: 16126021
Following gene: 16126023
Centisome position: 48.83
GC content: 65.98
Gene sequence:
>2199_bases GTGGCAGGTCGTGAACTGGAACAAGGCCAACGCCCTGTTCGACGCCGCCGCGCGCTAGGCGCGCACCTCACAAGAAAAAA CCTTCTCTCAAAGCCGCCCGGGGGCGCTAAGGACACGATGAAAACAGCACTCTTTCTCGGTAGCGCCATCGCGGTGATCG GTGCGCCGTCGCTTGTTCTGGCGCAGGCCTCGCCCTCTAGCTGGGTCAGCGAGGTCGTGATCACCAGCCCGAAGGGCAGC TTCACCGCGCCCAGCGCGCTGAGCGCCACGCGAACCGCGACCCCGGTCGAGGAAATCCCGCAATCGATCCAGACCCTGAC GCGAGGGCTGATCGAGGACCAGGCGCTGCAGACCCTGTCAGGCGCGCTGGTCAACGTCTCGGGCGTCACCCCGACCAGCA CCGAACAGTCCGTGCTGCAGCCACCGCTGATCCGCGGCTTCCCGGTCAGCTACTATTTCGACGGCGCGCCGACCTACCAG CTGCCTGCGGGCATCGCCGACCCCGCCACCCTGGTCAATGTCGAGCGGATCGAAGTGGCCAAGGGCCCGACCAGCACGCT CTATGGCGGCGGTTCGGGCGCCCCGCTCTCGGGGATCATCAACGTCGTCTCCCAGGATCCAGGCGAGACCTTCGGCGGGA CGGTCGCCCTGCGCGCCGGCAGCTTCAACACCCTGGGGGCCGACGCGGCGATCAATCTGCCGGTCAATGACAAGGTCGGG CTGCGTCTGGCCGGCATGACCGAGAAGGCCGACAGCTATATCGACCACATCGATAGCCGCCGCTACGCGATCTTCCCGAC CCTGGCCGTCGAGATGAGTGACAAGACGCGCCTGGTCGTTCGCGGCCGCTACAACCACCTCGAACAGCGCGAATATGCCG GCGTGCCGGCGGGGCTGACCTTCGCGCCGTCCCTGGTCATTGATCGCTACAAGTTCGCGGGCGCGCTGGACGCCCCCCGC ACCCGCATCACCAACAAGCAGCTGACCGCCAACCTGACGCACAAGATCTCTGACAAGGTCGAGGCCAGCGTCACGGCCAG CCGCTATGAGGGCGCGTTCAAGGAATGGTCGTCCTTCCCCTATGGCCAGATCTCTGGCTCGGTCTACAACTTCGGCACGG CCTATCTGCCCTCGGACACGACCGAGACCTACGCAACGGGCAGCCTGACCGCGCGTCTGGGTGAAGGCCTTGTCCGCCAC CAGGTACTGGTCGGCGTCGACTATGACAAGACGCGCTACTTCGGCGCGATGTACTTCAACCCGGCCTGGGCGACGCTGGA CTACGCCGCCGCCCGTCCGTACGCCGCCTTTGGCGGCAATCCGCCGTTCTTCTTCGACCAGAACGACCGCATGCGCACGA CGGCGGTCTTCGTCCAAGACCAGATCGCCATTGGCGAGCGTCTCGACATCACGGCCGGCCTGCGTTGGACGACACTGAAG ATCCAAAGCAATGTCGGCGCTGCGACGGCCGACACCGACAAGCGCGTCACGCCGCGTATCGGCGCCACCTATCGGATCGC CAACGGCGTCTCGGCCTTCGCCGGCTACGCCGAGGGCTTCAAGGGCGTGGTCGCGGGAGGCTTCTACGGCATCACCCCCA AGCCGGAAACGTCCCAGTCCTATGAAGGCGGCCTGAAGTTCGCGGCCCCGATCAAGGGGCTCACCGGCACGGTCTCGTTC TACCAGATCACCCGTCAGAACGTGATCACCGCGCACCCGACGATCCCGTTCGTCTCGGTGCAGACGGGCGAGCAGCGCTC GAAGGGCGTCGAAACCGATCTGGTCTACGAGCCGTCCCCGGCCCTCTCGGTGCTGTTCAACTACGCGTATACCAAAGCGA AGATCAGCAAGGACAACACCTTGCCAGTCGGCGACCGTCTGCGTGCTGTTCCTGAACATTCGGGCCGCCTGGCCGCCAAC TACCGCTTCCTGGCCGGCGACCTGAAGGGCCTGCGGATCGGCGGCGGCCTGACCGCCACGTCCAGCCGCGAACTGACCCT GCCCAACACCGTCGCCGCCAAGGGCCTGGCCCTGATCGACGCCCAGGCCTCGTACGACCTGGGCGTGGTCCGGATCGGGC TGTCGGTGGTCAATCTGGCCGGCCGCAAGGGCTTCGAGCCCTATCAGTACTTCGGCGGCCCCTATGTGATCCCGACCCAG CCCCGTTCGGCGTTCGTCAGCCTGCGAACGATTTTCTAA
Upstream 100 bases:
>100_bases ACGCGCCGGTCAAGGGCGCGCCGATCCTGGCCAATGATGTCTGGGAACACGCCTACTACCTGAAACACCAGAACAACCGC GGCGCCTATCTCGGCGGCTG
Downstream 100 bases:
>100_bases GGCCACGAAGCCAGGGAGGCCAAACCATGAGAATGTTTCAATCGCCCTTGTGGCGCGGCCTCCTTGGATCGCTCGCTGCG GTCATGGTGCTGGGGATGGC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MAGRELEQGQRPVRRRRALGAHLTRKNLLSKPPGGAKDTMKTALFLGSAIAVIGAPSLVLAQASPSSWVSEVVITSPKGS FTAPSALSATRTATPVEEIPQSIQTLTRGLIEDQALQTLSGALVNVSGVTPTSTEQSVLQPPLIRGFPVSYYFDGAPTYQ LPAGIADPATLVNVERIEVAKGPTSTLYGGGSGAPLSGIINVVSQDPGETFGGTVALRAGSFNTLGADAAINLPVNDKVG LRLAGMTEKADSYIDHIDSRRYAIFPTLAVEMSDKTRLVVRGRYNHLEQREYAGVPAGLTFAPSLVIDRYKFAGALDAPR TRITNKQLTANLTHKISDKVEASVTASRYEGAFKEWSSFPYGQISGSVYNFGTAYLPSDTTETYATGSLTARLGEGLVRH QVLVGVDYDKTRYFGAMYFNPAWATLDYAAARPYAAFGGNPPFFFDQNDRMRTTAVFVQDQIAIGERLDITAGLRWTTLK IQSNVGAATADTDKRVTPRIGATYRIANGVSAFAGYAEGFKGVVAGGFYGITPKPETSQSYEGGLKFAAPIKGLTGTVSF YQITRQNVITAHPTIPFVSVQTGEQRSKGVETDLVYEPSPALSVLFNYAYTKAKISKDNTLPVGDRLRAVPEHSGRLAAN YRFLAGDLKGLRIGGGLTATSSRELTLPNTVAAKGLALIDAQASYDLGVVRIGLSVVNLAGRKGFEPYQYFGGPYVIPTQ PRSAFVSLRTIF
Sequences:
>Translated_732_residues MAGRELEQGQRPVRRRRALGAHLTRKNLLSKPPGGAKDTMKTALFLGSAIAVIGAPSLVLAQASPSSWVSEVVITSPKGS FTAPSALSATRTATPVEEIPQSIQTLTRGLIEDQALQTLSGALVNVSGVTPTSTEQSVLQPPLIRGFPVSYYFDGAPTYQ LPAGIADPATLVNVERIEVAKGPTSTLYGGGSGAPLSGIINVVSQDPGETFGGTVALRAGSFNTLGADAAINLPVNDKVG LRLAGMTEKADSYIDHIDSRRYAIFPTLAVEMSDKTRLVVRGRYNHLEQREYAGVPAGLTFAPSLVIDRYKFAGALDAPR TRITNKQLTANLTHKISDKVEASVTASRYEGAFKEWSSFPYGQISGSVYNFGTAYLPSDTTETYATGSLTARLGEGLVRH QVLVGVDYDKTRYFGAMYFNPAWATLDYAAARPYAAFGGNPPFFFDQNDRMRTTAVFVQDQIAIGERLDITAGLRWTTLK IQSNVGAATADTDKRVTPRIGATYRIANGVSAFAGYAEGFKGVVAGGFYGITPKPETSQSYEGGLKFAAPIKGLTGTVSF YQITRQNVITAHPTIPFVSVQTGEQRSKGVETDLVYEPSPALSVLFNYAYTKAKISKDNTLPVGDRLRAVPEHSGRLAAN YRFLAGDLKGLRIGGGLTATSSRELTLPNTVAAKGLALIDAQASYDLGVVRIGLSVVNLAGRKGFEPYQYFGGPYVIPTQ PRSAFVSLRTIF >Mature_731_residues AGRELEQGQRPVRRRRALGAHLTRKNLLSKPPGGAKDTMKTALFLGSAIAVIGAPSLVLAQASPSSWVSEVVITSPKGSF TAPSALSATRTATPVEEIPQSIQTLTRGLIEDQALQTLSGALVNVSGVTPTSTEQSVLQPPLIRGFPVSYYFDGAPTYQL PAGIADPATLVNVERIEVAKGPTSTLYGGGSGAPLSGIINVVSQDPGETFGGTVALRAGSFNTLGADAAINLPVNDKVGL RLAGMTEKADSYIDHIDSRRYAIFPTLAVEMSDKTRLVVRGRYNHLEQREYAGVPAGLTFAPSLVIDRYKFAGALDAPRT RITNKQLTANLTHKISDKVEASVTASRYEGAFKEWSSFPYGQISGSVYNFGTAYLPSDTTETYATGSLTARLGEGLVRHQ VLVGVDYDKTRYFGAMYFNPAWATLDYAAARPYAAFGGNPPFFFDQNDRMRTTAVFVQDQIAIGERLDITAGLRWTTLKI QSNVGAATADTDKRVTPRIGATYRIANGVSAFAGYAEGFKGVVAGGFYGITPKPETSQSYEGGLKFAAPIKGLTGTVSFY QITRQNVITAHPTIPFVSVQTGEQRSKGVETDLVYEPSPALSVLFNYAYTKAKISKDNTLPVGDRLRAVPEHSGRLAANY RFLAGDLKGLRIGGGLTATSSRELTLPNTVAAKGLALIDAQASYDLGVVRIGLSVVNLAGRKGFEPYQYFGGPYVIPTQP RSAFVSLRTIF
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=695, Percent_Identity=27.0503597122302, Blast_Score=159, Evalue=7e-40, Organism=Escherichia coli, GI1787344, Length=602, Percent_Identity=24.5847176079734, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1787024, Length=273, Percent_Identity=25.2747252747253, Blast_Score=62, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78253; Mature: 78121
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00683 RHODANESE_2 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRELEQGQRPVRRRRALGAHLTRKNLLSKPPGGAKDTMKTALFLGSAIAVIGAPSLVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE AQASPSSWVSEVVITSPKGSFTAPSALSATRTATPVEEIPQSIQTLTRGLIEDQALQTLS EECCCHHHHCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GALVNVSGVTPTSTEQSVLQPPLIRGFPVSYYFDGAPTYQLPAGIADPATLVNVERIEVA CCEEEECCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCHHEEEEEEEEEC KGPTSTLYGGGSGAPLSGIINVVSQDPGETFGGTVALRAGSFNTLGADAAINLPVNDKVG CCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCC LRLAGMTEKADSYIDHIDSRRYAIFPTLAVEMSDKTRLVVRGRYNHLEQREYAGVPAGLT EEEECCCHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCC FAPSLVIDRYKFAGALDAPRTRITNKQLTANLTHKISDKVEASVTASRYEGAFKEWSSFP CCCHHHHHHHHHCCCCCCCCHHCCCCHHEEHHHHHHHHHHHHHEEHHHHCCHHHHHHCCC YGQISGSVYNFGTAYLPSDTTETYATGSLTARLGEGLVRHQVLVGVDYDKTRYFGAMYFN CCCCCCCEEECCEEECCCCCCCCEECCCHHHHHHCHHHHEEEEEECCCCCCEEEEEEEEC PAWATLDYAAARPYAAFGGNPPFFFDQNDRMRTTAVFVQDQIAIGERLDITAGLRWTTLK CCHHEEEHHHCCCCHHCCCCCCEEECCCCCEEEEEEEEEHHCCCCCEEEEECCCEEEEEE IQSNVGAATADTDKRVTPRIGATYRIANGVSAFAGYAEGFKGVVAGGFYGITPKPETSQS EECCCCCEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCEECCCCCCCCCCC YEGGLKFAAPIKGLTGTVSFYQITRQNVITAHPTIPFVSVQTGEQRSKGVETDLVYEPSP CCCCEEEECCCCCCCCCEEEEEEECCCEEEECCCCCEEEEECCCHHHCCCCCEEEECCCH ALSVLFNYAYTKAKISKDNTLPVGDRLRAVPEHSGRLAANYRFLAGDLKGLRIGGGLTAT HHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCEEECEEEEECCCCEEEECCCEEEC SSRELTLPNTVAAKGLALIDAQASYDLGVVRIGLSVVNLAGRKGFEPYQYFGGPYVIPTQ CCCCEECCCHHHHCCEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCHHHCCCCEEEECC PRSAFVSLRTIF CHHHEEEEEECC >Mature Secondary Structure AGRELEQGQRPVRRRRALGAHLTRKNLLSKPPGGAKDTMKTALFLGSAIAVIGAPSLVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE AQASPSSWVSEVVITSPKGSFTAPSALSATRTATPVEEIPQSIQTLTRGLIEDQALQTLS EECCCHHHHCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GALVNVSGVTPTSTEQSVLQPPLIRGFPVSYYFDGAPTYQLPAGIADPATLVNVERIEVA CCEEEECCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCHHEEEEEEEEEC KGPTSTLYGGGSGAPLSGIINVVSQDPGETFGGTVALRAGSFNTLGADAAINLPVNDKVG CCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCC LRLAGMTEKADSYIDHIDSRRYAIFPTLAVEMSDKTRLVVRGRYNHLEQREYAGVPAGLT EEEECCCHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCC FAPSLVIDRYKFAGALDAPRTRITNKQLTANLTHKISDKVEASVTASRYEGAFKEWSSFP CCCHHHHHHHHHCCCCCCCCHHCCCCHHEEHHHHHHHHHHHHHEEHHHHCCHHHHHHCCC YGQISGSVYNFGTAYLPSDTTETYATGSLTARLGEGLVRHQVLVGVDYDKTRYFGAMYFN CCCCCCCEEECCEEECCCCCCCCEECCCHHHHHHCHHHHEEEEEECCCCCCEEEEEEEEC PAWATLDYAAARPYAAFGGNPPFFFDQNDRMRTTAVFVQDQIAIGERLDITAGLRWTTLK CCHHEEEHHHCCCCHHCCCCCCEEECCCCCEEEEEEEEEHHCCCCCEEEEECCCEEEEEE IQSNVGAATADTDKRVTPRIGATYRIANGVSAFAGYAEGFKGVVAGGFYGITPKPETSQS EECCCCCEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCEECCCCCCCCCCC YEGGLKFAAPIKGLTGTVSFYQITRQNVITAHPTIPFVSVQTGEQRSKGVETDLVYEPSP CCCCEEEECCCCCCCCCEEEEEEECCCEEEECCCCCEEEEECCCHHHCCCCCEEEECCCH ALSVLFNYAYTKAKISKDNTLPVGDRLRAVPEHSGRLAANYRFLAGDLKGLRIGGGLTAT HHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCCCCEEECEEEEECCCCEEEECCCEEEC SSRELTLPNTVAAKGLALIDAQASYDLGVVRIGLSVVNLAGRKGFEPYQYFGGPYVIPTQ CCCCEECCCHHHHCCEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCHHHCCCCEEEECC PRSAFVSLRTIF CHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258; 7642488 [H]