| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is purR [H]
Identifier: 16125997
GI number: 16125997
Start: 1929517
End: 1930563
Strand: Direct
Name: purR [H]
Synonym: CC_1753
Alternate gene names: 16125997
Gene position: 1929517-1930563 (Clockwise)
Preceding gene: 16125995
Following gene: 16125998
Centisome position: 48.03
GC content: 69.34
Gene sequence:
>1047_bases TTGACCACCAAAAGACCTACGATCGACGATGTCGCCCGCCTGTCGGGTGTGGCGCGCGTCACGGTCTCGCGGGTGCTGAA CGGTGGTCCGAACGTGCGCGACGAGGTCCGCGCGCGGGTCATGCAGGCGGTCGAGACGCTGGCGTACAAGGTCAATCCGC AGGCGCGCAGCCTCGCGGGCGGGGCCAGCCGGCTGTTGGCCTTCGTCTTCGCGTCAGATCCCGAGAACGAGCCGAACTCG TACTACGAATCCGCGCTGGAGCTGGGTGCGCTGCGCGCCTGCCTGGCGCTGGGCTACCAAGTGCTGGTCCAGAACGTTCC GCAACAGACGCCCGATCACCAGAAGCGGATCCTGGACCTGATCACCACCCAACGCTGCGAGGGCCTGATCCTGTCGCCGC CCTACAGCGACGACGTCGCGCTGATCGAGGCGGCGCTGGCGCAGGGCTGCAAGGTCGTGACCGTCTCGCCTGGCGGTCCG GGACGCGGGAAGGCCGACGGGGTCGGCGTCGACGACGAGGCCGGCGGCTATGACATGACCCGCGAGCTCCTGCGTCTGGG TCACCGACGATTCGGCTTCATCGCCGGCCTGGAAGGGCACCTTTCGGCCGACCGACGTCTGCAGGGCTTCCGCAGAGCGC TCGGCGAGCAGGGGCTGGGGGAGGGCGACTGTGTCGTGCTCCGGGGGGACTTCACCTTCCGGTCGGGTACCCGCCTGGCG CCGGAGCTTCTGGATCATCCGCTCAAGCCGACCGCGCTGGTCTGCGCCAACGACGACATGGCCGCCGGCGTCCTGTCCGC CGCCCATGCGCGGGGGCTCAGTATCCCGCAGGACCTGTCGATCACAGGTTTCGACGATGCGCCTGTGGCCGGCATCGTCT GGCCGCCGCTCACCACGGTGCACCAGCCGGTCAAGGTCCTGGGCCAGCGCGCCGTCGAGCTGCTGGTCGCGCGCCTGACG GGCGTCAACGTCTCCGACGCGGCGATTTTCGACGAGCTCGAGCATGCCGTCGTGACACGGCAAACCACCACCGCGCCCCA CCTCTAG
Upstream 100 bases:
>100_bases AGGGCGGGTCTCTGTCGGTCCGTGCGCGTCATGACGTTGAGCCGCTTGTGTTGCTCTGCTTTCCTGACCATCTTCCCGGC GCTCGAAGGGGGAGCTCCAT
Downstream 100 bases:
>100_bases ACCGCCTGAGCTTGACAACGTTGTCGCCTTGAGCGCAATTGGAAGCGCTTCCATAGGGGCGCATTCACGGCTACTGGCCT GACAACAAGAACGATATCTC
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTTKRPTIDDVARLSGVARVTVSRVLNGGPNVRDEVRARVMQAVETLAYKVNPQARSLAGGASRLLAFVFASDPENEPNS YYESALELGALRACLALGYQVLVQNVPQQTPDHQKRILDLITTQRCEGLILSPPYSDDVALIEAALAQGCKVVTVSPGGP GRGKADGVGVDDEAGGYDMTRELLRLGHRRFGFIAGLEGHLSADRRLQGFRRALGEQGLGEGDCVVLRGDFTFRSGTRLA PELLDHPLKPTALVCANDDMAAGVLSAAHARGLSIPQDLSITGFDDAPVAGIVWPPLTTVHQPVKVLGQRAVELLVARLT GVNVSDAAIFDELEHAVVTRQTTTAPHL
Sequences:
>Translated_348_residues MTTKRPTIDDVARLSGVARVTVSRVLNGGPNVRDEVRARVMQAVETLAYKVNPQARSLAGGASRLLAFVFASDPENEPNS YYESALELGALRACLALGYQVLVQNVPQQTPDHQKRILDLITTQRCEGLILSPPYSDDVALIEAALAQGCKVVTVSPGGP GRGKADGVGVDDEAGGYDMTRELLRLGHRRFGFIAGLEGHLSADRRLQGFRRALGEQGLGEGDCVVLRGDFTFRSGTRLA PELLDHPLKPTALVCANDDMAAGVLSAAHARGLSIPQDLSITGFDDAPVAGIVWPPLTTVHQPVKVLGQRAVELLVARLT GVNVSDAAIFDELEHAVVTRQTTTAPHL >Mature_347_residues TTKRPTIDDVARLSGVARVTVSRVLNGGPNVRDEVRARVMQAVETLAYKVNPQARSLAGGASRLLAFVFASDPENEPNSY YESALELGALRACLALGYQVLVQNVPQQTPDHQKRILDLITTQRCEGLILSPPYSDDVALIEAALAQGCKVVTVSPGGPG RGKADGVGVDDEAGGYDMTRELLRLGHRRFGFIAGLEGHLSADRRLQGFRRALGEQGLGEGDCVVLRGDFTFRSGTRLAP ELLDHPLKPTALVCANDDMAAGVLSAAHARGLSIPQDLSITGFDDAPVAGIVWPPLTTVHQPVKVLGQRAVELLVARLTG VNVSDAAIFDELEHAVVTRQTTTAPHL
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=315, Percent_Identity=33.015873015873, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787948, Length=320, Percent_Identity=32.1875, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1790369, Length=339, Percent_Identity=31.858407079646, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789068, Length=342, Percent_Identity=28.6549707602339, Blast_Score=141, Evalue=8e-35, Organism=Escherichia coli, GI1789202, Length=306, Percent_Identity=31.6993464052288, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1788474, Length=346, Percent_Identity=32.6589595375723, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1786540, Length=350, Percent_Identity=30.5714285714286, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1789456, Length=319, Percent_Identity=32.9153605015674, Blast_Score=121, Evalue=9e-29, Organism=Escherichia coli, GI1787580, Length=322, Percent_Identity=27.0186335403727, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI48994940, Length=328, Percent_Identity=25.9146341463415, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790715, Length=327, Percent_Identity=23.8532110091743, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787906, Length=328, Percent_Identity=25.3048780487805, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786268, Length=316, Percent_Identity=24.3670886075949, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37118; Mature: 36987
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKRPTIDDVARLSGVARVTVSRVLNGGPNVRDEVRARVMQAVETLAYKVNPQARSLAG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GASRLLAFVFASDPENEPNSYYESALELGALRACLALGYQVLVQNVPQQTPDHQKRILDL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ITTQRCEGLILSPPYSDDVALIEAALAQGCKVVTVSPGGPGRGKADGVGVDDEAGGYDMT HHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH RELLRLGHRRFGFIAGLEGHLSADRRLQGFRRALGEQGLGEGDCVVLRGDFTFRSGTRLA HHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCC PELLDHPLKPTALVCANDDMAAGVLSAAHARGLSIPQDLSITGFDDAPVAGIVWPPLTTV HHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEECCCHHHH HQPVKVLGQRAVELLVARLTGVNVSDAAIFDELEHAVVTRQTTTAPHL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTKRPTIDDVARLSGVARVTVSRVLNGGPNVRDEVRARVMQAVETLAYKVNPQARSLAG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GASRLLAFVFASDPENEPNSYYESALELGALRACLALGYQVLVQNVPQQTPDHQKRILDL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ITTQRCEGLILSPPYSDDVALIEAALAQGCKVVTVSPGGPGRGKADGVGVDDEAGGYDMT HHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH RELLRLGHRRFGFIAGLEGHLSADRRLQGFRRALGEQGLGEGDCVVLRGDFTFRSGTRLA HHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCC PELLDHPLKPTALVCANDDMAAGVLSAAHARGLSIPQDLSITGFDDAPVAGIVWPPLTTV HHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEECCCHHHH HQPVKVLGQRAVELLVARLTGVNVSDAAIFDELEHAVVTRQTTTAPHL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA