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The map label for this gene is 16125938

Identifier: 16125938

GI number: 16125938

Start: 1867625

End: 1868086

Strand: Direct

Name: 16125938

Synonym: CC_1693

Alternate gene names: NA

Gene position: 1867625-1868086 (Clockwise)

Preceding gene: 16125937

Following gene: 16125939

Centisome position: 46.49

GC content: 67.75

Gene sequence:

>462_bases
ATGACGGCTAACCCCTGCGAGGTCTGGTTCTATCACCTCGAGCGCTCGCCGCTCGAGGCGGTGCTGCCCGAGCTCCTGGA
AAAGACGCTGGGGCGCGGCTGGAAGGCGCTGGTGCGCGGCGGCGATCCGCGCCGGATCGAGGCCCTGGATCAGCATCTCT
GGACCTGGCGGGAGGACAGCTTCCTGCCGCATGGCCTGGCCAGCGAGCCGATGGCCGAGCGACAGCCCGTGCTGCTGACC
GCCGCAGAGGGAAACCCCAACAGCGGCGATGCGCTGTTTCTCATCGACGGGGCCGAACCTGGAGATCTTTCAGGGGTTTC
GCGCTGCATCCTCTTGTTCGACGGGCGTGACGATCAGGCCTTGGCGCAGGCGCGCGGACGTTGGTCGACGTTCAAGAAGG
CCGGGCATCCGGTGTCGTACTGGCGCCAGGGCGCCGAGCGGGGTTGGGAGAAGCAGGCATGA

Upstream 100 bases:

>100_bases
GGCCCAGCGCAAAGCGCGCCGAGCCGGGACCGCCCCAAGCGCCGCGTTTGTCGCGGTCCCGGGTCTTCGCTACGCTCGCC
CGGGATGACAGGGAATTTCG

Downstream 100 bases:

>100_bases
GGCGGACCTTTGCAGTGTTGATCTCGGCGATGGTTCTGGCGGGTTGCTCCAGCGCACCGGAGCCCGCGCCGCCGCCACCC
CCGACGACGCCGACCGCGCC

Product: DNA polymerase III subunit chi

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Subunit Chi HolC; DNA Polymerase III Chi Subunit Superfamily; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTANPCEVWFYHLERSPLEAVLPELLEKTLGRGWKALVRGGDPRRIEALDQHLWTWREDSFLPHGLASEPMAERQPVLLT
AAEGNPNSGDALFLIDGAEPGDLSGVSRCILLFDGRDDQALAQARGRWSTFKKAGHPVSYWRQGAERGWEKQA

Sequences:

>Translated_153_residues
MTANPCEVWFYHLERSPLEAVLPELLEKTLGRGWKALVRGGDPRRIEALDQHLWTWREDSFLPHGLASEPMAERQPVLLT
AAEGNPNSGDALFLIDGAEPGDLSGVSRCILLFDGRDDQALAQARGRWSTFKKAGHPVSYWRQGAERGWEKQA
>Mature_152_residues
TANPCEVWFYHLERSPLEAVLPELLEKTLGRGWKALVRGGDPRRIEALDQHLWTWREDSFLPHGLASEPMAERQPVLLTA
AEGNPNSGDALFLIDGAEPGDLSGVSRCILLFDGRDDQALAQARGRWSTFKKAGHPVSYWRQGAERGWEKQA

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 17148; Mature: 17017

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANPCEVWFYHLERSPLEAVLPELLEKTLGRGWKALVRGGDPRRIEALDQHLWTWREDS
CCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCC
FLPHGLASEPMAERQPVLLTAAEGNPNSGDALFLIDGAEPGDLSGVSRCILLFDGRDDQA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCHH
LAQARGRWSTFKKAGHPVSYWRQGAERGWEKQA
HHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TANPCEVWFYHLERSPLEAVLPELLEKTLGRGWKALVRGGDPRRIEALDQHLWTWREDS
CCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCC
FLPHGLASEPMAERQPVLLTAAEGNPNSGDALFLIDGAEPGDLSGVSRCILLFDGRDDQA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCHH
LAQARGRWSTFKKAGHPVSYWRQGAERGWEKQA
HHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA