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The map label for this gene is yicC [C]

Identifier: 16125926

GI number: 16125926

Start: 1853837

End: 1854718

Strand: Direct

Name: yicC [C]

Synonym: CC_1680

Alternate gene names: 16125926

Gene position: 1853837-1854718 (Clockwise)

Preceding gene: 16125925

Following gene: 16125927

Centisome position: 46.15

GC content: 68.93

Gene sequence:

>882_bases
ATGCCACTGTCGGGCATGACAGGGTTCGCGCGTGTTGAAGGCGCGCACGGCGCCTGGTCGTGGGCGGTGGAGGCCCGCAG
CGTCAATGGCCGCAACCTTGAGACCCGCTTTCGCGGTCCGCCGGGCTTCGAAGGCCTGGAGCGCGCCGCGCGTGACGGGG
CCCAAGCGCGGTTCCAGCGTGGCCAACTGACCGTCAACGTCCAGGCCAAGCGGGCGGAGGTCTCGGGCGAGACCCGGGTG
AATGTCCAGGTCCTGGAGCGCTACCTCACCGCCGGCGGCCCCTATGTGGCCACCGGCATGATCGCCAAGCCGAGCCTGGA
TGGTCTGCTGGCGCTCAAGGGCGTGATCGAGGCGCGCGAGGACGAAGACGACGCCGAGACGCGCGCTGCGGTCGAAGCCG
CCATGGCCGCTTCAATCGCTCAGGCCCTGGACGGCCTGAAGACGGCGCGCCTGGAAGAGGGGGCGGCGCTGGATCCGATC
CTGAGCGGCCTGGTCGCCCGGATCGAGCAACTGACCGCCCAGGCCGAGACCGAAGCCGCCGGCCAGCCAGCGGTGATCAA
GGAGCGCTTCGCCCGACGCATGACCGAACTGGTCGGCGAGGCCGCCAGCGAGGATCGCATCGTTCAGGAAGCCGCCGCCC
AGGCGGTGAAGGCCGATGTGCGCGAAGAACTGGACCGTCTGGCCAGCCACGTGGTGGCCGCGCGCGGTCTGCTGTCGGGC
GAGGGCGCATCGGGTCGGCGGCTCGACTTCCTCTCCCAGGAATTCATGCGCGAATCCAACACCCTCTGCTCGAAATCGGC
CCTGACCAGCCTGACCGCGATCGGTCTGGAGCTGAAGGCCGTCATCGAGCAGTTCCGCGAGCAGGTTCAGAACGTTGAAT
AA

Upstream 100 bases:

>100_bases
GCACAACGCCAATGTCGTCAAGTGGCGTCAGATCGAGCGTGAACGCGCGGGCAAGGCGCCGGCCAAGCCGGCCGCTGCGC
CGCTGGCCGGGGGCTGAGGC

Downstream 100 bases:

>100_bases
GTCCCATCATCCCCATCGTGGTCTGCTGCTGATGGTCGTCGCGCCTTCGGGCGTCGGCAAGACGTCGCTGACCCGCCGCC
TCGTCTCTGACCATGGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPLSGMTGFARVEGAHGAWSWAVEARSVNGRNLETRFRGPPGFEGLERAARDGAQARFQRGQLTVNVQAKRAEVSGETRV
NVQVLERYLTAGGPYVATGMIAKPSLDGLLALKGVIEAREDEDDAETRAAVEAAMAASIAQALDGLKTARLEEGAALDPI
LSGLVARIEQLTAQAETEAAGQPAVIKERFARRMTELVGEAASEDRIVQEAAAQAVKADVREELDRLASHVVAARGLLSG
EGASGRRLDFLSQEFMRESNTLCSKSALTSLTAIGLELKAVIEQFREQVQNVE

Sequences:

>Translated_293_residues
MPLSGMTGFARVEGAHGAWSWAVEARSVNGRNLETRFRGPPGFEGLERAARDGAQARFQRGQLTVNVQAKRAEVSGETRV
NVQVLERYLTAGGPYVATGMIAKPSLDGLLALKGVIEAREDEDDAETRAAVEAAMAASIAQALDGLKTARLEEGAALDPI
LSGLVARIEQLTAQAETEAAGQPAVIKERFARRMTELVGEAASEDRIVQEAAAQAVKADVREELDRLASHVVAARGLLSG
EGASGRRLDFLSQEFMRESNTLCSKSALTSLTAIGLELKAVIEQFREQVQNVE
>Mature_292_residues
PLSGMTGFARVEGAHGAWSWAVEARSVNGRNLETRFRGPPGFEGLERAARDGAQARFQRGQLTVNVQAKRAEVSGETRVN
VQVLERYLTAGGPYVATGMIAKPSLDGLLALKGVIEAREDEDDAETRAAVEAAMAASIAQALDGLKTARLEEGAALDPIL
SGLVARIEQLTAQAETEAAGQPAVIKERFARRMTELVGEAASEDRIVQEAAAQAVKADVREELDRLASHVVAARGLLSGE
GASGRRLDFLSQEFMRESNTLCSKSALTSLTAIGLELKAVIEQFREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=297, Percent_Identity=34.6801346801347, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31341; Mature: 31210

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSGMTGFARVEGAHGAWSWAVEARSVNGRNLETRFRGPPGFEGLERAARDGAQARFQR
CCCCCCCCHHHCCCCCCCEEHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHC
GQLTVNVQAKRAEVSGETRVNVQVLERYLTAGGPYVATGMIAKPSLDGLLALKGVIEARE
CCEEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCC
DEDDAETRAAVEAAMAASIAQALDGLKTARLEEGAALDPILSGLVARIEQLTAQAETEAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GQPAVIKERFARRMTELVGEAASEDRIVQEAAAQAVKADVREELDRLASHVVAARGLLSG
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGASGRRLDFLSQEFMRESNTLCSKSALTSLTAIGLELKAVIEQFREQVQNVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLSGMTGFARVEGAHGAWSWAVEARSVNGRNLETRFRGPPGFEGLERAARDGAQARFQR
CCCCCCCHHHCCCCCCCEEHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHC
GQLTVNVQAKRAEVSGETRVNVQVLERYLTAGGPYVATGMIAKPSLDGLLALKGVIEARE
CCEEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCC
DEDDAETRAAVEAAMAASIAQALDGLKTARLEEGAALDPILSGLVARIEQLTAQAETEAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GQPAVIKERFARRMTELVGEAASEDRIVQEAAAQAVKADVREELDRLASHVVAARGLLSG
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGASGRRLDFLSQEFMRESNTLCSKSALTSLTAIGLELKAVIEQFREQVQNVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]