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The map label for this gene is 16125830

Identifier: 16125830

GI number: 16125830

Start: 1749722

End: 1750441

Strand: Direct

Name: 16125830

Synonym: CC_1583

Alternate gene names: NA

Gene position: 1749722-1750441 (Clockwise)

Preceding gene: 16125829

Following gene: 16125831

Centisome position: 43.56

GC content: 65.83

Gene sequence:

>720_bases
ATGGTGATCGACACCAACAAAGGCCGCGTGCTGGTCGAACTGGTTCCAGAGGTCGCCCCCAACCACGTGGCGCGCCTGCA
GGACCTCTCCCGCGCGGGTGTCTATGACGGCCGTACGTTCTTCCGCGTCATCGACCGTTTCATGGCTCAGACCGGTGACC
CGACGAACACGGGCGAGGGCGGTTCGGATCGCCCGAACCTGAAGGCCGAGTTCACGTTCCGGCGCGCCGCCGACACCGGC
TTTGTACCGATGGCCGCGCCGGCCGGGCTTGAGGTCGGCTACATCAAGTCGCTGCCCGTCGTCAGCCAGAACTGGAGCTG
GAGCGACGTCACCAGCGACAAGAAGGTCGCCGCCTGGGCCACCTATTGCCCCGGCGTGATCGGCATGGCGCGAAGTGAGG
ATAACAACTCCGCCAACAGCCAGTTCTTTCTGATGCGCCAGCCTTATCCGTCGCTCGACAAGCGCTATACGGCGTTTGGT
CGGGTGATCAGCGGCCTGGATGCGGTCCGCGTGATCAAGACGGGCGAACCGGTTCCCGCGCCGCAGGACATGATGCAGAA
GGTCCGTCTGCTCTCGGACATCCCCGAGAGCGAGCGGCCCAAGGTGCGCGTGATCGACCCCAAGGGTCCCTGGTTCGCCG
CCGAGACCAAGCGCCTGCGCGCGGAGAAGGGCGCGGACTTCTCGGTCTGCGATATCGCGCTCCCGGTCGAGGTCCGCTGA

Upstream 100 bases:

>100_bases
CGGTCTTTGTCTTGCCGCCTGCGCCAGTGTCGCAACGGCGGCGCCGAAGACGGCGAAGCCGGGCGAAGCTGACTGGCGCA
CGCCTGCGCCTGAATCGATC

Downstream 100 bases:

>100_bases
GGCTAAACCGATTTCCGGCCGCAACTTGGTTCACAGGCGGGCGTGAACCGCGCTAGAAGCGCGGATAACACTCGCCATCC
AAGGGAAGACCATGTCGGCC

Product: peptidyl-prolyl cis-trans isomerase, cyclophilin-type

Products: NA

Alternate protein names: PPIase sll0227; Rotamase sll0227 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVIDTNKGRVLVELVPEVAPNHVARLQDLSRAGVYDGRTFFRVIDRFMAQTGDPTNTGEGGSDRPNLKAEFTFRRAADTG
FVPMAAPAGLEVGYIKSLPVVSQNWSWSDVTSDKKVAAWATYCPGVIGMARSEDNNSANSQFFLMRQPYPSLDKRYTAFG
RVISGLDAVRVIKTGEPVPAPQDMMQKVRLLSDIPESERPKVRVIDPKGPWFAAETKRLRAEKGADFSVCDIALPVEVR

Sequences:

>Translated_239_residues
MVIDTNKGRVLVELVPEVAPNHVARLQDLSRAGVYDGRTFFRVIDRFMAQTGDPTNTGEGGSDRPNLKAEFTFRRAADTG
FVPMAAPAGLEVGYIKSLPVVSQNWSWSDVTSDKKVAAWATYCPGVIGMARSEDNNSANSQFFLMRQPYPSLDKRYTAFG
RVISGLDAVRVIKTGEPVPAPQDMMQKVRLLSDIPESERPKVRVIDPKGPWFAAETKRLRAEKGADFSVCDIALPVEVR
>Mature_239_residues
MVIDTNKGRVLVELVPEVAPNHVARLQDLSRAGVYDGRTFFRVIDRFMAQTGDPTNTGEGGSDRPNLKAEFTFRRAADTG
FVPMAAPAGLEVGYIKSLPVVSQNWSWSDVTSDKKVAAWATYCPGVIGMARSEDNNSANSQFFLMRQPYPSLDKRYTAFG
RVISGLDAVRVIKTGEPVPAPQDMMQKVRLLSDIPESERPKVRVIDPKGPWFAAETKRLRAEKGADFSVCDIALPVEVR

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides [H]

COG id: COG0652

COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR020892
- InterPro:   IPR002130 [H]

Pfam domain/function: PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 26390; Mature: 26390

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDTNKGRVLVELVPEVAPNHVARLQDLSRAGVYDGRTFFRVIDRFMAQTGDPTNTGEG
CEEECCCCEEEEEECCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
GSDRPNLKAEFTFRRAADTGFVPMAAPAGLEVGYIKSLPVVSQNWSWSDVTSDKKVAAWA
CCCCCCCEEEEEEEECCCCCCEECCCCCCCEECEEECCCCCCCCCCCCCCCCCCCHHHHH
TYCPGVIGMARSEDNNSANSQFFLMRQPYPSLDKRYTAFGRVISGLDAVRVIKTGEPVPA
HHCCHHHEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCC
PQDMMQKVRLLSDIPESERPKVRVIDPKGPWFAAETKRLRAEKGADFSVCDIALPVEVR
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MVIDTNKGRVLVELVPEVAPNHVARLQDLSRAGVYDGRTFFRVIDRFMAQTGDPTNTGEG
CEEECCCCEEEEEECCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
GSDRPNLKAEFTFRRAADTGFVPMAAPAGLEVGYIKSLPVVSQNWSWSDVTSDKKVAAWA
CCCCCCCEEEEEEEECCCCCCEECCCCCCCEECEEECCCCCCCCCCCCCCCCCCCHHHHH
TYCPGVIGMARSEDNNSANSQFFLMRQPYPSLDKRYTAFGRVISGLDAVRVIKTGEPVPA
HHCCHHHEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCC
PQDMMQKVRLLSDIPESERPKVRVIDPKGPWFAAETKRLRAEKGADFSVCDIALPVEVR
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]