| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is yfeW [C]
Identifier: 16125814
GI number: 16125814
Start: 1732082
End: 1733554
Strand: Direct
Name: yfeW [C]
Synonym: CC_1567
Alternate gene names: 16125814
Gene position: 1732082-1733554 (Clockwise)
Preceding gene: 16125813
Following gene: 16125815
Centisome position: 43.12
GC content: 68.64
Gene sequence:
>1473_bases GTGGAAGGAATGGGTGGGCCGCCGCGCGGGCGCCGGGAAGCTGGTTCCCAAGGGCTTCGCCACCAACAAGCGGTTCCGTC CCAAATGAGGATCGGACGGTCGCGTCGCCGCGCGTTGAGCCTGTTGGCCGGCGTTTTCGGCTGCGCGGCCGTCGCCGCGA CTCCGGCGCTGGCCCTGCCCAAGGGCAAGCCGGAGGAGGGCGGCTTCAGCGCCGAACGACTGAAACGCCTCGACGACCAT ATGCAGACCATGGTCGATCGGGGACAGATCGCCGGCGGTGTAACCGTCCTGGCGCGCCACGGACGGGTGGTTCAGGCCCG CGCCTTCGGGCGCCGCGTGCTGGGCGGCGACCCGATGCCGATGGACGCGATCTTCCGCATCCGCTCGGAGACCAAGCCGG TCACCGGCGTCGCCATGATGATGCTCTACGAGCAGGGGCTGTGGCGGCTGGACGATCCGGTGAGTCTGCACATTCCGGAG TTCGCCAATCTGCGTGTGGCCAAGGGCGTCGATGAGACCGGACAGCCGATCCTGACCCCGGTCTCCAGATCGCCCACCAT GCGCGAGCTGATGACCCATACGGCGGGCTTCGCCTATGGACTGGCCAACGATCCCAGCAGCCCGGCCGACCAGGCCTATT ACCGGGCCGAAGTCCTGCAGTCGGCGTCGCTGACCGACCTGGTGCAGAAGGTGTCGGGCCTGCCGATGTTCGCCGAGCCC GGGCAGCTGTGGCGCTACAGCGTGGCGGCCGACATCCAGGGCTACATCGTCGAGAAGCTGTCGGGCCAGAGCCTGCCGGT GTTCATGCAGGAGCGCATCTTCACGCCGCTGGGCATGAAGGACACGGCCTTCTACGTCCCTGAGGAGAAGCAGGCACGTC TGGCGGCGCTGTATGACGGCGATCCGGCCACCGGGCAGTTGGTCCCTGCGGTCGAGGGGGCCTGGCGCGACGTCAGCAAG CCGCCGGCCGCGCCGCTGGGCGGCGGTGGTTTGGTGTCGACGGCTGGCGATTTCGCGCGCTTCGCCCAGATGATCCTCAA CAAGGGTGAGCTCGACGGCGTCCGGATTCTGAAGCCGGAAACCGTGGCGCTGATGACCCAGAACCATCTGCCCGAGGGTT TTGTGGTCACCACCAATGGCACCGCAGGGGTTCTGGCGCCGGCGGCTCGGCCTTTTCCGTTCGCTGCGGGTATGGGCTAC GGGATCGACATGGCGGTCGCCGTCGACCCGGCGGCGTCTGGCGCGCCGGTCGGCCCCGGCACTGTCAGCTGGGGCGGCAG CGCAGGCACCTGGTTCTGGATTGATCCGGCCAACAACCTGTTCTTTGTCGGCATGATCCAGCGACTGGGCGGGGTGGGCC CCGGCCTGGACGCGCAATCGCGTACGCTCGTTTACCAGGCGCTGGAGCGGCCGCCGATGCCGCCGGTCCAGGTGTCTGCG AAGGCCCCTGTGCGGCCGACGGTCTCGCGCTGA
Upstream 100 bases:
>100_bases AGGCCTACCGCGAAGGCGGCCTGCGCGACGGTCTGTCGTTCAACGCCGAGACCGGAGCCTACTGGATCGACACCGCCGGC CGGCGTCGTGACTGGGCCGA
Downstream 100 bases:
>100_bases CCCGGGCAACACGCCGGCTGCGGCTGAGTTTTCGAAGCGGCCGAAAATACCGGGTTCCAACCGCCAAAGCGTCGCTCTAA GGTCTCTCAAACAATTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MEGMGGPPRGRREAGSQGLRHQQAVPSQMRIGRSRRRALSLLAGVFGCAAVAATPALALPKGKPEEGGFSAERLKRLDDH MQTMVDRGQIAGGVTVLARHGRVVQARAFGRRVLGGDPMPMDAIFRIRSETKPVTGVAMMMLYEQGLWRLDDPVSLHIPE FANLRVAKGVDETGQPILTPVSRSPTMRELMTHTAGFAYGLANDPSSPADQAYYRAEVLQSASLTDLVQKVSGLPMFAEP GQLWRYSVAADIQGYIVEKLSGQSLPVFMQERIFTPLGMKDTAFYVPEEKQARLAALYDGDPATGQLVPAVEGAWRDVSK PPAAPLGGGGLVSTAGDFARFAQMILNKGELDGVRILKPETVALMTQNHLPEGFVVTTNGTAGVLAPAARPFPFAAGMGY GIDMAVAVDPAASGAPVGPGTVSWGGSAGTWFWIDPANNLFFVGMIQRLGGVGPGLDAQSRTLVYQALERPPMPPVQVSA KAPVRPTVSR
Sequences:
>Translated_490_residues MEGMGGPPRGRREAGSQGLRHQQAVPSQMRIGRSRRRALSLLAGVFGCAAVAATPALALPKGKPEEGGFSAERLKRLDDH MQTMVDRGQIAGGVTVLARHGRVVQARAFGRRVLGGDPMPMDAIFRIRSETKPVTGVAMMMLYEQGLWRLDDPVSLHIPE FANLRVAKGVDETGQPILTPVSRSPTMRELMTHTAGFAYGLANDPSSPADQAYYRAEVLQSASLTDLVQKVSGLPMFAEP GQLWRYSVAADIQGYIVEKLSGQSLPVFMQERIFTPLGMKDTAFYVPEEKQARLAALYDGDPATGQLVPAVEGAWRDVSK PPAAPLGGGGLVSTAGDFARFAQMILNKGELDGVRILKPETVALMTQNHLPEGFVVTTNGTAGVLAPAARPFPFAAGMGY GIDMAVAVDPAASGAPVGPGTVSWGGSAGTWFWIDPANNLFFVGMIQRLGGVGPGLDAQSRTLVYQALERPPMPPVQVSA KAPVRPTVSR >Mature_490_residues MEGMGGPPRGRREAGSQGLRHQQAVPSQMRIGRSRRRALSLLAGVFGCAAVAATPALALPKGKPEEGGFSAERLKRLDDH MQTMVDRGQIAGGVTVLARHGRVVQARAFGRRVLGGDPMPMDAIFRIRSETKPVTGVAMMMLYEQGLWRLDDPVSLHIPE FANLRVAKGVDETGQPILTPVSRSPTMRELMTHTAGFAYGLANDPSSPADQAYYRAEVLQSASLTDLVQKVSGLPMFAEP GQLWRYSVAADIQGYIVEKLSGQSLPVFMQERIFTPLGMKDTAFYVPEEKQARLAALYDGDPATGQLVPAVEGAWRDVSK PPAAPLGGGGLVSTAGDFARFAQMILNKGELDGVRILKPETVALMTQNHLPEGFVVTTNGTAGVLAPAARPFPFAAGMGY GIDMAVAVDPAASGAPVGPGTVSWGGSAGTWFWIDPANNLFFVGMIQRLGGVGPGLDAQSRTLVYQALERPPMPPVQVSA KAPVRPTVSR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082101, Length=436, Percent_Identity=26.3761467889908, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1786574, Length=314, Percent_Identity=28.6624203821656, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 52133; Mature: 52133
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGMGGPPRGRREAGSQGLRHQQAVPSQMRIGRSRRRALSLLAGVFGCAAVAATPALALP CCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KGKPEEGGFSAERLKRLDDHMQTMVDRGQIAGGVTVLARHGRVVQARAFGRRVLGGDPMP CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEHHHHCCHHCCCCCCC MDAIFRIRSETKPVTGVAMMMLYEQGLWRLDDPVSLHIPEFANLRVAKGVDETGQPILTP HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCEEEC VSRSPTMRELMTHTAGFAYGLANDPSSPADQAYYRAEVLQSASLTDLVQKVSGLPMFAEP CCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC GQLWRYSVAADIQGYIVEKLSGQSLPVFMQERIFTPLGMKDTAFYVPEEKQARLAALYDG CHHEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEECCCHHCCEEEEEECC DPATGQLVPAVEGAWRDVSKPPAAPLGGGGLVSTAGDFARFAQMILNKGELDGVRILKPE CCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCC TVALMTQNHLPEGFVVTTNGTAGVLAPAARPFPFAAGMGYGIDMAVAVDPAASGAPVGPG EEEEEECCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC TVSWGGSAGTWFWIDPANNLFFVGMIQRLGGVGPGLDAQSRTLVYQALERPPMPPVQVSA CEECCCCCCEEEEECCCCCEEHEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECC KAPVRPTVSR CCCCCCCCCC >Mature Secondary Structure MEGMGGPPRGRREAGSQGLRHQQAVPSQMRIGRSRRRALSLLAGVFGCAAVAATPALALP CCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KGKPEEGGFSAERLKRLDDHMQTMVDRGQIAGGVTVLARHGRVVQARAFGRRVLGGDPMP CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEHHHHCCHHCCCCCCC MDAIFRIRSETKPVTGVAMMMLYEQGLWRLDDPVSLHIPEFANLRVAKGVDETGQPILTP HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCEEEC VSRSPTMRELMTHTAGFAYGLANDPSSPADQAYYRAEVLQSASLTDLVQKVSGLPMFAEP CCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC GQLWRYSVAADIQGYIVEKLSGQSLPVFMQERIFTPLGMKDTAFYVPEEKQARLAALYDG CHHEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEECCCHHCCEEEEEECC DPATGQLVPAVEGAWRDVSKPPAAPLGGGGLVSTAGDFARFAQMILNKGELDGVRILKPE CCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCC TVALMTQNHLPEGFVVTTNGTAGVLAPAARPFPFAAGMGYGIDMAVAVDPAASGAPVGPG EEEEEECCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC TVSWGGSAGTWFWIDPANNLFFVGMIQRLGGVGPGLDAQSRTLVYQALERPPMPPVQVSA CEECCCCCCEEEEECCCCCEEHEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECC KAPVRPTVSR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]