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The map label for this gene is ycbK [H]

Identifier: 16125759

GI number: 16125759

Start: 1670907

End: 1671557

Strand: Direct

Name: ycbK [H]

Synonym: CC_1512

Alternate gene names: 16125759

Gene position: 1670907-1671557 (Clockwise)

Preceding gene: 16125758

Following gene: 16125761

Centisome position: 41.6

GC content: 64.67

Gene sequence:

>651_bases
ATGCATCGACGTAAGCTGCTCCAGTGGGGGCTGGGCGCTATCGGGGCTGGACTTCTGCCACTAGCGGCGCGCGCCGACGA
CGACATCATCGGCGCGCTGCTGGAGGGCAAGATGCCTCAGGCCACGCCGGTTCCGCCGCCGACCACCGTCGCTGCGACGG
TCGCTTCGATCGATCCGCCCGCGCTGAAGCCTGCTGTGGATCCGCGCTGGGTTCATCTCCACAACGTCCATACCGGCGAG
AAGCTGGAAGCGGTCTACTGGGAGAACGGCGACTATGTTCCGGACGCCGTGAGTGCGCTGGACAAGGTGCTGCGCGACTA
TCGCAACGACGAGGTCCATCCCATCGATCGGGGCCTCTATGACCTGCTCGACCAGATCGCGCGCAAGACCCAGAGCAAGG
GGCCGTTCCAGGTGATCTCGGGCTACCGCTCTCCGGCGACCAACCGTCTGCTGTCCAAGCGCAGCGGCGAGGTGGCCAAG
AAGAGCCTGCACATGGATGGCAAGGCCATGGACATCTTCCTGGAGGATGTCGAGCTCAAGCACGTCCGCGCTGCGGCTTT
GGATCTGAGCGTTGGCGGCGTCGGCTACTATCCGACCAGCAACTTCGTCCATGTCGATGTCGGACCGGTCCGCAAGTGGA
CGGGGACCTGA

Upstream 100 bases:

>100_bases
ATCTGGTGCAGCGTATCGCCGCACTCTGATACGGCTCAGCTTGCATTCCGGCCCGTCATGAGGTGTCCTCCCGACCTTCC
GTGTCGGGTAAGGCGTAATC

Downstream 100 bases:

>100_bases
GGCGCTACTCGCCTCTCAGCCGAATTCGATAACCAAGCTCTGGTTCACCTGTTTAGACCGTGATAGCGGGCTTCAAGGCT
AAGTCGGCGTGGATGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MHRRKLLQWGLGAIGAGLLPLAARADDDIIGALLEGKMPQATPVPPPTTVAATVASIDPPALKPAVDPRWVHLHNVHTGE
KLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLYDLLDQIARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAK
KSLHMDGKAMDIFLEDVELKHVRAAALDLSVGGVGYYPTSNFVHVDVGPVRKWTGT

Sequences:

>Translated_216_residues
MHRRKLLQWGLGAIGAGLLPLAARADDDIIGALLEGKMPQATPVPPPTTVAATVASIDPPALKPAVDPRWVHLHNVHTGE
KLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLYDLLDQIARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAK
KSLHMDGKAMDIFLEDVELKHVRAAALDLSVGGVGYYPTSNFVHVDVGPVRKWTGT
>Mature_216_residues
MHRRKLLQWGLGAIGAGLLPLAARADDDIIGALLEGKMPQATPVPPPTTVAATVASIDPPALKPAVDPRWVHLHNVHTGE
KLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLYDLLDQIARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAK
KSLHMDGKAMDIFLEDVELKHVRAAALDLSVGGVGYYPTSNFVHVDVGPVRKWTGT

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=212, Percent_Identity=38.6792452830189, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 23597; Mature: 23597

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRKLLQWGLGAIGAGLLPLAARADDDIIGALLEGKMPQATPVPPPTTVAATVASIDPP
CCHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC
ALKPAVDPRWVHLHNVHTGEKLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLY
CCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
DLLDQIARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAKKSLHMDGKAMDIFLEDVELK
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHHHHH
HVRAAALDLSVGGVGYYPTSNFVHVDVGPVRKWTGT
HHHHHHHEEEECCEEECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MHRRKLLQWGLGAIGAGLLPLAARADDDIIGALLEGKMPQATPVPPPTTVAATVASIDPP
CCHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC
ALKPAVDPRWVHLHNVHTGEKLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLY
CCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
DLLDQIARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAKKSLHMDGKAMDIFLEDVELK
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHHHHH
HVRAAALDLSVGGVGYYPTSNFVHVDVGPVRKWTGT
HHHHHHHEEEECCEEECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]