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The map label for this gene is recJ [H]

Identifier: 16125635

GI number: 16125635

Start: 1536950

End: 1538770

Strand: Direct

Name: recJ [H]

Synonym: CC_1386

Alternate gene names: 16125635

Gene position: 1536950-1538770 (Clockwise)

Preceding gene: 16125634

Following gene: 16125636

Centisome position: 38.26

GC content: 68.97

Gene sequence:

>1821_bases
ATGCCCGCCGATGGTGTCACCGATATTTCCTCCAGCGCCTTTCTGGGCGTCGAACGCTCGCTGAGCGGCCGCGCCTGGCG
CGAGCGGCCGGCCGATCTCGCCGTGGTTCGCGAAATTCAGCAGCGTCATGGCCTGATCGAGCCCCTGGCGAAGGCGCTGG
TGTCGCGCGGCGTCACCCTGGAGCACGCCGAGCATTATCTGCGCCCGACGCTCAAGGCCCTGTTCCCCGACCCATCGCTG
TTCACCGATATGGACCGGGCGGCCGAAATCCTGATCGACGCGCTGGAGCGCGGTCGCCCGACCATGGTGTTCGCCGACTA
TGATGTCGACGGCGCCACCAGCGCCGCGCAGCTGGTCCGGTGGTTTCGCCATATGGGCGTCGAGCTGCCGATCTACATCC
CCGACCGTCTGACCGAGGGCTATGGCCCGAGCCCGGCGGCGTTCCGCAAGATCCGCGATGGCGGCGCTGAGCTTGTGGTC
ACCCTCGATTGCGGCGCGGCGGCCTATGACGCGATCGCCAGCGCCGGAGAGATCGGGCTGGAGGTCGTGGTGATCGACCA
CCACCTGATGCGCGAGGACCCGCCGGCCGCCGCGGCCGTGGTCAATCCAAACCGGCCGGGCTGCCCAAGCGGGCAGGGCG
TGCTCGCGGCGGCCGGGGTGACGTTCGTGCTGCTGACCGCGCTGAACCGCGAGGCGCGCAAGCGTGGCCTCTTTACCGAG
GATCGACCGCAGCCCGACCCGCGCCAATGGCTGGACCTCGTCGCCTTGGGCGAGGTCTGCGACGTCACCCAGTTGGTTGG
TTTCAATCGCGCGCTGACCGCCCTGGGTCTTCGGGCCATGGGCGCCTGGGCCAATCCCGGGCTGAAGGCGTTGTTCGAAG
TCGGCAAAGGCTCGGGCGAGCCGTCAGTGTTCACGGCGGGCTTTATCCTGGGGCCGCGCATCAACGCCGGCGGCCGGGTC
GGTCGCTCCGATCTCGGTGCGCGGCTTCTGTCTACTGACGATCCGCTGGAGGCGCGGGCGCTGGCCGAAGAACTCGACAG
CCTCAACACCGAGCGAAAGGCCGTGGAGGCCGCCGTCGTCGAAGAGGCGGCGGCGATGCTGGAGCGCGGCAGCAACTTCA
ATCCCGACGCGCCGGTGATCGTGGTGGCGGGCGACGATTGGCACCCGGGTGTGATCGGCATCGTCGCGGGTCGCCTGCGC
GAACGCTATCGCAAGCCTGTCGTGGTGATCGGGATTGATCGGGCCGCGAATGTCGGCAAGGGCTCGGGCCGGTCGCAGTC
CGGGGTCAATCTTGGCCGGGCGATCCAGGCGGCGTTCGAGGCCGGCCTTCTGATGGCCGGTGGCGGTCACGCCATGGCGG
CCGGGCTGTCGATTCGTCCCGAGATGATTCCCGAGTTCCGCGCCTTTCTGGAGGAGCGCCTGGCGGGTGAGATGGAGGCC
GTGGGCGTGGAGGCCGTCGAGGTCGACGCCTTGGTCCAACCTCGCGCGGCGAACCGTGCGCTGCTCGATGACTTTCAGCG
TCTCGCGCCGTTCGGGCCGGGTAACCCCGAACCCCTGTTCGCGTTGAGCCAGGTGCGGCCAGAGCGCGTCTCGGCGCTGA
AGGGCGGGCACGTACGTATGGACCTGGTCGGTCCGACGGGCGACCGCATCAAGGCGATCAGTTGGCGAAGCGCCGAGACC
CCGCTGGGGCAGCGATTGCTGGCGGGGGGCGGACCTCTCGACGTCGTCGGCAAGCTCAAGCCTGACGACTACATGGGCCG
AAATGGCGTGCAGCTCGAGATCGAGGACGCCCACGATCCTCGCGCGCGTTACGCGGACTAG

Upstream 100 bases:

>100_bases
GAGGTCATCCGGGCCGAGATGCGCGCCGGCTGACGCACGTCCGACCCTGTCGTGTGGGCGCCGCATGGTTCGAATCCTTG
CGACAAGCTAGGCTCGCCCG

Downstream 100 bases:

>100_bases
AGATTTAAGGGGGCGAGCCCGCACCTTGGCAGGCCCAGACGGGGATGTGGACGGACTGAAAAAAGTATCTTGGAGCGGGT
TGCGCGCCCCAAACGGCGCG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MPADGVTDISSSAFLGVERSLSGRAWRERPADLAVVREIQQRHGLIEPLAKALVSRGVTLEHAEHYLRPTLKALFPDPSL
FTDMDRAAEILIDALERGRPTMVFADYDVDGATSAAQLVRWFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVV
TLDCGAAAYDAIASAGEIGLEVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFVLLTALNREARKRGLFTE
DRPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAWANPGLKALFEVGKGSGEPSVFTAGFILGPRINAGGRV
GRSDLGARLLSTDDPLEARALAEELDSLNTERKAVEAAVVEEAAAMLERGSNFNPDAPVIVVAGDDWHPGVIGIVAGRLR
ERYRKPVVVIGIDRAANVGKGSGRSQSGVNLGRAIQAAFEAGLLMAGGGHAMAAGLSIRPEMIPEFRAFLEERLAGEMEA
VGVEAVEVDALVQPRAANRALLDDFQRLAPFGPGNPEPLFALSQVRPERVSALKGGHVRMDLVGPTGDRIKAISWRSAET
PLGQRLLAGGGPLDVVGKLKPDDYMGRNGVQLEIEDAHDPRARYAD

Sequences:

>Translated_606_residues
MPADGVTDISSSAFLGVERSLSGRAWRERPADLAVVREIQQRHGLIEPLAKALVSRGVTLEHAEHYLRPTLKALFPDPSL
FTDMDRAAEILIDALERGRPTMVFADYDVDGATSAAQLVRWFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVV
TLDCGAAAYDAIASAGEIGLEVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFVLLTALNREARKRGLFTE
DRPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAWANPGLKALFEVGKGSGEPSVFTAGFILGPRINAGGRV
GRSDLGARLLSTDDPLEARALAEELDSLNTERKAVEAAVVEEAAAMLERGSNFNPDAPVIVVAGDDWHPGVIGIVAGRLR
ERYRKPVVVIGIDRAANVGKGSGRSQSGVNLGRAIQAAFEAGLLMAGGGHAMAAGLSIRPEMIPEFRAFLEERLAGEMEA
VGVEAVEVDALVQPRAANRALLDDFQRLAPFGPGNPEPLFALSQVRPERVSALKGGHVRMDLVGPTGDRIKAISWRSAET
PLGQRLLAGGGPLDVVGKLKPDDYMGRNGVQLEIEDAHDPRARYAD
>Mature_605_residues
PADGVTDISSSAFLGVERSLSGRAWRERPADLAVVREIQQRHGLIEPLAKALVSRGVTLEHAEHYLRPTLKALFPDPSLF
TDMDRAAEILIDALERGRPTMVFADYDVDGATSAAQLVRWFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVVT
LDCGAAAYDAIASAGEIGLEVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFVLLTALNREARKRGLFTED
RPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAWANPGLKALFEVGKGSGEPSVFTAGFILGPRINAGGRVG
RSDLGARLLSTDDPLEARALAEELDSLNTERKAVEAAVVEEAAAMLERGSNFNPDAPVIVVAGDDWHPGVIGIVAGRLRE
RYRKPVVVIGIDRAANVGKGSGRSQSGVNLGRAIQAAFEAGLLMAGGGHAMAAGLSIRPEMIPEFRAFLEERLAGEMEAV
GVEAVEVDALVQPRAANRALLDDFQRLAPFGPGNPEPLFALSQVRPERVSALKGGHVRMDLVGPTGDRIKAISWRSAETP
LGQRLLAGGGPLDVVGKLKPDDYMGRNGVQLEIEDAHDPRARYAD

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=480, Percent_Identity=35, Blast_Score=241, Evalue=7e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64630; Mature: 64498

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADGVTDISSSAFLGVERSLSGRAWRERPADLAVVREIQQRHGLIEPLAKALVSRGVTL
CCCCCCCCCCCCCEECCHHCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
EHAEHYLRPTLKALFPDPSLFTDMDRAAEILIDALERGRPTMVFADYDVDGATSAAQLVR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
WFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVVTLDCGAAAYDAIASAGEIGL
HHHHCCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCE
EVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFVLLTALNREARKRGLFTE
EEEEECHHHHCCCCCCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC
DRPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAWANPGLKALFEVGKGSGE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
PSVFTAGFILGPRINAGGRVGRSDLGARLLSTDDPLEARALAEELDSLNTERKAVEAAVV
CCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
EEAAAMLERGSNFNPDAPVIVVAGDDWHPGVIGIVAGRLRERYRKPVVVIGIDRAANVGK
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
GSGRSQSGVNLGRAIQAAFEAGLLMAGGGHAMAAGLSIRPEMIPEFRAFLEERLAGEMEA
CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHH
VGVEAVEVDALVQPRAANRALLDDFQRLAPFGPGNPEPLFALSQVRPERVSALKGGHVRM
CCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHCCCCEEE
DLVGPTGDRIKAISWRSAETPLGQRLLAGGGPLDVVGKLKPDDYMGRNGVQLEIEDAHDP
EEECCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCC
RARYAD
CCCCCC
>Mature Secondary Structure 
PADGVTDISSSAFLGVERSLSGRAWRERPADLAVVREIQQRHGLIEPLAKALVSRGVTL
CCCCCCCCCCCCEECCHHCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
EHAEHYLRPTLKALFPDPSLFTDMDRAAEILIDALERGRPTMVFADYDVDGATSAAQLVR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
WFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVVTLDCGAAAYDAIASAGEIGL
HHHHCCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCE
EVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFVLLTALNREARKRGLFTE
EEEEECHHHHCCCCCCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC
DRPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAWANPGLKALFEVGKGSGE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
PSVFTAGFILGPRINAGGRVGRSDLGARLLSTDDPLEARALAEELDSLNTERKAVEAAVV
CCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
EEAAAMLERGSNFNPDAPVIVVAGDDWHPGVIGIVAGRLRERYRKPVVVIGIDRAANVGK
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
GSGRSQSGVNLGRAIQAAFEAGLLMAGGGHAMAAGLSIRPEMIPEFRAFLEERLAGEMEA
CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHH
VGVEAVEVDALVQPRAANRALLDDFQRLAPFGPGNPEPLFALSQVRPERVSALKGGHVRM
CCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHCCCCEEE
DLVGPTGDRIKAISWRSAETPLGQRLLAGGGPLDVVGKLKPDDYMGRNGVQLEIEDAHDP
EEECCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCC
RARYAD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]