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The map label for this gene is nusB

Identifier: 16125609

GI number: 16125609

Start: 1513066

End: 1513515

Strand: Direct

Name: nusB

Synonym: CC_1360

Alternate gene names: 16125609

Gene position: 1513066-1513515 (Clockwise)

Preceding gene: 16125608

Following gene: 16125610

Centisome position: 37.67

GC content: 63.56

Gene sequence:

>450_bases
ATGAGCGGCAACCGTATCCAACCGCGCTCCGTTGCGCGTCTCGCCGCCGTCCAGGCGCTGTATCAGATGGAAGTCTCGGG
CGCCGGCGTCGATTCGGTGATCCGCGAGTTCGGCGAGCATCGCTTCGACCGCGACGTCGAGGGCGAGCAGCTCGCGGCGG
CTGACGAGACCTTCTTCGCCGACCTCGCGCGCGGCGTGGTGACCAATCAAGCCAAGATCGACCAGGGCATCGTCAAGCGT
TTGGCCTCCGGTTGGCGACTGGAAAGACTGGATGCGACGGCCCGCGCGGTGCTGCGCGCCGGGGCCTTCGAGCTGATGTA
CCGATCGGACGTTCCGACCGAGGTGGTCATCAATGAATATGTAGAGATCGCGAAATCCTTTTTTGAAGGTCCCGAGTCAG
GCTTCATCAATGGCGCCCTCGACGCGATCGCCCGTGATGCACGAGACTGA

Upstream 100 bases:

>100_bases
TGAGCCGCGCCCGGGTCAGCGAAGGTGATCGCGGCGGCGCGGCCGCTAAGGCCTGCCTGGAGACCATCGGCCTGAAGCGC
CAACTGCTGGGGCAGGCCCG

Downstream 100 bases:

>100_bases
CGAAGAAGACTGGTTCGCTGAAGACGACGCTGCGGCCCCCGCTGCGGCGCCGCCGACTGAATTCGATCATATCGCGCGGT
TGCTGCGGCCGCTGACGCGC

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSGNRIQPRSVARLAAVQALYQMEVSGAGVDSVIREFGEHRFDRDVEGEQLAAADETFFADLARGVVTNQAKIDQGIVKR
LASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEYVEIAKSFFEGPESGFINGALDAIARDARD

Sequences:

>Translated_149_residues
MSGNRIQPRSVARLAAVQALYQMEVSGAGVDSVIREFGEHRFDRDVEGEQLAAADETFFADLARGVVTNQAKIDQGIVKR
LASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEYVEIAKSFFEGPESGFINGALDAIARDARD
>Mature_148_residues
SGNRIQPRSVARLAAVQALYQMEVSGAGVDSVIREFGEHRFDRDVEGEQLAAADETFFADLARGVVTNQAKIDQGIVKRL
ASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEYVEIAKSFFEGPESGFINGALDAIARDARD

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=130, Percent_Identity=40, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_CAUCN (B8H535)

Other databases:

- EMBL:   CP001340
- RefSeq:   YP_002516795.1
- ProteinModelPortal:   B8H535
- GeneID:   7330151
- GenomeReviews:   CP001340_GR
- KEGG:   ccs:CCNA_01422
- OMA:   AFFRDIV
- ProtClustDB:   PRK00202
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16365; Mature: 16233

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNRIQPRSVARLAAVQALYQMEVSGAGVDSVIREFGEHRFDRDVEGEQLAAADETFFA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
DLARGVVTNQAKIDQGIVKRLASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEY
HHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VEIAKSFFEGPESGFINGALDAIARDARD
HHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGNRIQPRSVARLAAVQALYQMEVSGAGVDSVIREFGEHRFDRDVEGEQLAAADETFFA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
DLARGVVTNQAKIDQGIVKRLASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEY
HHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VEIAKSFFEGPESGFINGALDAIARDARD
HHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA