Click here to switch to the map view.

The map label for this gene is 16125452

Identifier: 16125452

GI number: 16125452

Start: 1360221

End: 1361123

Strand: Direct

Name: 16125452

Synonym: CC_1201

Alternate gene names: NA

Gene position: 1360221-1361123 (Clockwise)

Preceding gene: 16125447

Following gene: 16125453

Centisome position: 33.86

GC content: 63.79

Gene sequence:

>903_bases
GTGGGACCGTCCGACGGCGCGGCCTTGCTGGCAAGCCGGTGTCTGTTCGCCATGGACGAGGTTCTGCTTGACGACCCGGC
GCCTCGGCGCGACTCTCAACTCAACAACGATAACCTACGGGAGGCCCCTATGGCCGACGGTGCTCTGCCCACGATGTCCC
TGAAGGGCAAGGTCAGCGAAGCGGAATGGCAAGCGCGGGTCGATCTCGCCGCTCTCTATCGTCTCGTGGCCCTGCACGGG
TGGGACGACATGATCTTCACTCACATCTCGGCCCGCATTCCGGGACCCGAGCATCACTTCCTGATCAATCCCTATGGGAT
GTTCTTCGGCGAGATCACGGCCTCGAGCCTGGTGAAGGTCGATCTCGAGGGCAACGTGATCGACAAGACGCCGTACTACA
TCAATCCGGCGGGTTTCACGATCCACTCGGCCGTCCACGCCGCGCGCGAGGACGCTCACTATGTGATGCACCTGCACAGC
GATCAGGGCGTGGCGGTGTCGGCGCATAAGGAGGGCCTGCTGCCGCTGACGCAGCATTCGCTAATCGTCTTGCCTCAGCT
CGCCTATCACGATTATGAAGGCATTGCGCTCAACCTTGAGGAGCGCGAACGTATCGTGGCTGACCTTGGCCAGAAGAAGC
TGCTGATGCTGCGCAACCACGGCACGCTGTCGGTGGGGGCCACTGCGGCCGAATGCTGGTTGGGGATGTTCTTCCTGGAG
CGAGCATGCGCGCAGCAGGTGATGGCGCTTTCGATCGGACGCGACAACGTGCTGCTGGCGCCCGAGGCCGCGCAGGACGA
GGTCCGCAAGCAGATCGGCATGGGCATGGGCATGATCGGCGGACTGGCCTGGCCGGGCTGCCTGCGCAAGCTGGACCGGG
AGTCGCCGGGCTACGCGGACTAA

Upstream 100 bases:

>100_bases
CACCACCACCAGCAGCGGATTGAACCGCAGGGCGAAGCCCAGCACGATTACCGCCACGCCCAACAGGGTCAGCATCCCCG
GCGACTCCCCTCGTTCCCCG

Downstream 100 bases:

>100_bases
GCGCAACTTCGGACTTCGCAAAGGCCGCCGCGATCCTGGTGATCGCGGCGGCTTTTTCGTGTCTGAGCGCCGGCGCAGCG
AACGCGGGGGCCTGGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MGPSDGAALLASRCLFAMDEVLLDDPAPRRDSQLNNDNLREAPMADGALPTMSLKGKVSEAEWQARVDLAALYRLVALHG
WDDMIFTHISARIPGPEHHFLINPYGMFFGEITASSLVKVDLEGNVIDKTPYYINPAGFTIHSAVHAAREDAHYVMHLHS
DQGVAVSAHKEGLLPLTQHSLIVLPQLAYHDYEGIALNLEERERIVADLGQKKLLMLRNHGTLSVGATAAECWLGMFFLE
RACAQQVMALSIGRDNVLLAPEAAQDEVRKQIGMGMGMIGGLAWPGCLRKLDRESPGYAD

Sequences:

>Translated_300_residues
MGPSDGAALLASRCLFAMDEVLLDDPAPRRDSQLNNDNLREAPMADGALPTMSLKGKVSEAEWQARVDLAALYRLVALHG
WDDMIFTHISARIPGPEHHFLINPYGMFFGEITASSLVKVDLEGNVIDKTPYYINPAGFTIHSAVHAAREDAHYVMHLHS
DQGVAVSAHKEGLLPLTQHSLIVLPQLAYHDYEGIALNLEERERIVADLGQKKLLMLRNHGTLSVGATAAECWLGMFFLE
RACAQQVMALSIGRDNVLLAPEAAQDEVRKQIGMGMGMIGGLAWPGCLRKLDRESPGYAD
>Mature_299_residues
GPSDGAALLASRCLFAMDEVLLDDPAPRRDSQLNNDNLREAPMADGALPTMSLKGKVSEAEWQARVDLAALYRLVALHGW
DDMIFTHISARIPGPEHHFLINPYGMFFGEITASSLVKVDLEGNVIDKTPYYINPAGFTIHSAVHAAREDAHYVMHLHSD
QGVAVSAHKEGLLPLTQHSLIVLPQLAYHDYEGIALNLEERERIVADLGQKKLLMLRNHGTLSVGATAAECWLGMFFLER
ACAQQVMALSIGRDNVLLAPEAAQDEVRKQIGMGMGMIGGLAWPGCLRKLDRESPGYAD

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826321, Length=261, Percent_Identity=42.5287356321839, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI29826319, Length=241, Percent_Identity=43.9834024896266, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI29826323, Length=261, Percent_Identity=42.5287356321839, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI29826325, Length=261, Percent_Identity=42.5287356321839, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI297307158, Length=199, Percent_Identity=39.1959798994975, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI9257192, Length=199, Percent_Identity=39.1959798994975, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI297307160, Length=207, Percent_Identity=38.1642512077295, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI9257190, Length=199, Percent_Identity=39.1959798994975, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI9943848, Length=249, Percent_Identity=38.1526104417671, Blast_Score=144, Evalue=7e-35,
Organism=Homo sapiens, GI89276787, Length=199, Percent_Identity=39.1959798994975, Blast_Score=144, Evalue=7e-35,
Organism=Homo sapiens, GI9951927, Length=249, Percent_Identity=38.1526104417671, Blast_Score=144, Evalue=9e-35,
Organism=Homo sapiens, GI62912453, Length=249, Percent_Identity=38.1526104417671, Blast_Score=144, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI115533216, Length=248, Percent_Identity=38.3064516129032, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI115533218, Length=250, Percent_Identity=38, Blast_Score=161, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71989550, Length=247, Percent_Identity=34.8178137651822, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71989544, Length=247, Percent_Identity=34.8178137651822, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71989560, Length=247, Percent_Identity=34.8178137651822, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71989555, Length=247, Percent_Identity=34.8178137651822, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71989541, Length=247, Percent_Identity=34.8178137651822, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI281363755, Length=209, Percent_Identity=38.755980861244, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI281363751, Length=209, Percent_Identity=38.755980861244, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24655690, Length=209, Percent_Identity=38.755980861244, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24655685, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=7e-37,
Organism=Drosophila melanogaster, GI281363761, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281363759, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281363753, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281363763, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281363757, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI17136738, Length=209, Percent_Identity=38.755980861244, Blast_Score=150, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 32860; Mature: 32729

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPSDGAALLASRCLFAMDEVLLDDPAPRRDSQLNNDNLREAPMADGALPTMSLKGKVSE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
AEWQARVDLAALYRLVALHGWDDMIFTHISARIPGPEHHFLINPYGMFFGEITASSLVKV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCEEEE
DLEGNVIDKTPYYINPAGFTIHSAVHAAREDAHYVMHLHSDQGVAVSAHKEGLLPLTQHS
EECCCEEECCCCEECCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCEECCCC
LIVLPQLAYHDYEGIALNLEERERIVADLGQKKLLMLRNHGTLSVGATAAECWLGMFFLE
EEEEEHHHHCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCEEECCHHHHHHHHHHHHH
RACAQQVMALSIGRDNVLLAPEAAQDEVRKQIGMGMGMIGGLAWPGCLRKLDRESPGYAD
HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GPSDGAALLASRCLFAMDEVLLDDPAPRRDSQLNNDNLREAPMADGALPTMSLKGKVSE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
AEWQARVDLAALYRLVALHGWDDMIFTHISARIPGPEHHFLINPYGMFFGEITASSLVKV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCEEEE
DLEGNVIDKTPYYINPAGFTIHSAVHAAREDAHYVMHLHSDQGVAVSAHKEGLLPLTQHS
EECCCEEECCCCEECCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCEECCCC
LIVLPQLAYHDYEGIALNLEERERIVADLGQKKLLMLRNHGTLSVGATAAECWLGMFFLE
EEEEEHHHHCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCEEECCHHHHHHHHHHHHH
RACAQQVMALSIGRDNVLLAPEAAQDEVRKQIGMGMGMIGGLAWPGCLRKLDRESPGYAD
HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]