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The map label for this gene is 16124505

Identifier: 16124505

GI number: 16124505

Start: 261621

End: 262904

Strand: Direct

Name: 16124505

Synonym: CC_0250

Alternate gene names: NA

Gene position: 261621-262904 (Clockwise)

Preceding gene: 16124504

Following gene: 16124506

Centisome position: 6.51

GC content: 65.81

Gene sequence:

>1284_bases
TTGCAACATAGCGGATACGCCATGCTCTACGCCCTGCACGAGGCGGCCTATTACGCCTCCACTCCCATGCGCCTCGCGGC
GCTGGCGGCCCGGGACTTCTGGGGATCGCCGCTGAACCCGGCCGCTGACTCGGCCGTCGGTCGGCGCATGCACGCCGGCG
CCGACCTGTTCGCCAACGTCACGCGGCGCTACGGCAAGCCGAAGTGGAACATCGACAAGGTCAAGGTCGGCCAGGTCGAC
GTCCGCGTCCGCCCAACCGTGGTCTGGGAAAGCCCCTGGGCGCGCCTGGTCCAGTTCGACCGCGACATGGCCGACATGCG
CCGGGCGGGGAAGTTCTCGCTGGATCCGGCGGTGCTGATCGTCGCGCCGCTGTCGGGCCACTACGCCACCCTGCTGCGCG
GCACGGTCGAGGCCTTCCTGCCCGACCACGCCGTCTTCATCGTCGACTGGGTCAACGCCCGCGAAGTCTCGGTCCTGGAG
GGCCGCTTCGACTTCCACGACTATATCGACCACGTCATCCAGATGCTGGAGGTGCTGGGCCCGCGTCCGAACGTGGTGGC
CGTGTGCCAGCCAGGACCGCCGGTCCTCGCCGCCGCCGCCTTGATGGCCGAGCAGAACCATCCGTCGCGTCCGGCCAGCA
TGACCTTCATGGGCTCGCCGATCGACGCGCGCCTGTCGCCGACCGTCACCAACCAGCTGGCCGAGGAAAAGCCGTTCACC
TGGTTCCAGTCGAACATGATCTACAACGTGCCGCCGCCCTATGCGGGCGCAGGAAGGCGCGTCTATCCGGGCTTCGTCCA
GCTGGCCAGCTTCATGAGCATGAACGCCGACCGCCACCAGGAAGCCCACCGTCGCTATTTCAACCACCTAGTCAGTGGCG
ATGGCGACAGCGCCGACAAGCACCTGGAGTTCTACGACGAGTACCTGTCGGTGCTGGACCTGACCGAGGAGTTCTATCTC
CAGACCATCGATATCGTCTTCCAGCAGTATCTGTTGCCCAAGGGCGAGCTGGTGCATCGCGGGACGCGGGTGAAGCCCGA
GGTGATCACCGACATTGGCCTGATGACGGTCGAGGGTGAAAACGACGACATCTCCGGCATCGGCCAGACCCAGGCGGCGC
ACGGCCTGTGCGCGAACATCCCTGAGGACATGAAGCTGGACTATGTCCAGCCCAGCGTCGGCCACTACGGGGTGTTCAAC
GGGCGGCGGTTCCGCGAGGAGATCTATCCGCGCGTGCGGAAGTTCATCCGGAAATGCGACCCGAACTTCGGCGAGGAAGT
CTGA

Upstream 100 bases:

>100_bases
AGATCGCTCGTCGCATCAAGGATGCGGTTCGCGAGGGCTGATCCGGCGTAAAAATTCGCGATCGGCTGGACTTTGTTAGG
CTTCGGCGTGTTATGTTGCG

Downstream 100 bases:

>100_bases
CGTAGGGTCGCTCTTGCGGCGAACGCGCGCGCACGCGATCTAGAGGCGATGTTTGCGCGGTCCGCCCAACGCTTTTCCGA
TGGTGATCGACTTGAGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly(3-Hydroxyalkanoate)Synthetase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Polyhydroxybutanoate Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MQHSGYAMLYALHEAAYYASTPMRLAALAARDFWGSPLNPAADSAVGRRMHAGADLFANVTRRYGKPKWNIDKVKVGQVD
VRVRPTVVWESPWARLVQFDRDMADMRRAGKFSLDPAVLIVAPLSGHYATLLRGTVEAFLPDHAVFIVDWVNAREVSVLE
GRFDFHDYIDHVIQMLEVLGPRPNVVAVCQPGPPVLAAAALMAEQNHPSRPASMTFMGSPIDARLSPTVTNQLAEEKPFT
WFQSNMIYNVPPPYAGAGRRVYPGFVQLASFMSMNADRHQEAHRRYFNHLVSGDGDSADKHLEFYDEYLSVLDLTEEFYL
QTIDIVFQQYLLPKGELVHRGTRVKPEVITDIGLMTVEGENDDISGIGQTQAAHGLCANIPEDMKLDYVQPSVGHYGVFN
GRRFREEIYPRVRKFIRKCDPNFGEEV

Sequences:

>Translated_427_residues
MQHSGYAMLYALHEAAYYASTPMRLAALAARDFWGSPLNPAADSAVGRRMHAGADLFANVTRRYGKPKWNIDKVKVGQVD
VRVRPTVVWESPWARLVQFDRDMADMRRAGKFSLDPAVLIVAPLSGHYATLLRGTVEAFLPDHAVFIVDWVNAREVSVLE
GRFDFHDYIDHVIQMLEVLGPRPNVVAVCQPGPPVLAAAALMAEQNHPSRPASMTFMGSPIDARLSPTVTNQLAEEKPFT
WFQSNMIYNVPPPYAGAGRRVYPGFVQLASFMSMNADRHQEAHRRYFNHLVSGDGDSADKHLEFYDEYLSVLDLTEEFYL
QTIDIVFQQYLLPKGELVHRGTRVKPEVITDIGLMTVEGENDDISGIGQTQAAHGLCANIPEDMKLDYVQPSVGHYGVFN
GRRFREEIYPRVRKFIRKCDPNFGEEV
>Mature_427_residues
MQHSGYAMLYALHEAAYYASTPMRLAALAARDFWGSPLNPAADSAVGRRMHAGADLFANVTRRYGKPKWNIDKVKVGQVD
VRVRPTVVWESPWARLVQFDRDMADMRRAGKFSLDPAVLIVAPLSGHYATLLRGTVEAFLPDHAVFIVDWVNAREVSVLE
GRFDFHDYIDHVIQMLEVLGPRPNVVAVCQPGPPVLAAAALMAEQNHPSRPASMTFMGSPIDARLSPTVTNQLAEEKPFT
WFQSNMIYNVPPPYAGAGRRVYPGFVQLASFMSMNADRHQEAHRRYFNHLVSGDGDSADKHLEFYDEYLSVLDLTEEFYL
QTIDIVFQQYLLPKGELVHRGTRVKPEVITDIGLMTVEGENDDISGIGQTQAAHGLCANIPEDMKLDYVQPSVGHYGVFN
GRRFREEIYPRVRKFIRKCDPNFGEEV

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48056; Mature: 48056

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHSGYAMLYALHEAAYYASTPMRLAALAARDFWGSPLNPAADSAVGRRMHAGADLFANV
CCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHH
TRRYGKPKWNIDKVKVGQVDVRVRPTVVWESPWARLVQFDRDMADMRRAGKFSLDPAVLI
HHHCCCCCCCCCEEEECEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VAPLSGHYATLLRGTVEAFLPDHAVFIVDWVNAREVSVLEGRFDFHDYIDHVIQMLEVLG
EECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC
PRPNVVAVCQPGPPVLAAAALMAEQNHPSRPASMTFMGSPIDARLSPTVTNQLAEEKPFT
CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCE
WFQSNMIYNVPPPYAGAGRRVYPGFVQLASFMSMNADRHQEAHRRYFNHLVSGDGDSADK
EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH
HLEFYDEYLSVLDLTEEFYLQTIDIVFQQYLLPKGELVHRGTRVKPEVITDIGLMTVEGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHCCCEEEEECC
NDDISGIGQTQAAHGLCANIPEDMKLDYVQPSVGHYGVFNGRRFREEIYPRVRKFIRKCD
CCCCCCCCCHHHHCCHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PNFGEEV
CCCCCCC
>Mature Secondary Structure
MQHSGYAMLYALHEAAYYASTPMRLAALAARDFWGSPLNPAADSAVGRRMHAGADLFANV
CCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHH
TRRYGKPKWNIDKVKVGQVDVRVRPTVVWESPWARLVQFDRDMADMRRAGKFSLDPAVLI
HHHCCCCCCCCCEEEECEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VAPLSGHYATLLRGTVEAFLPDHAVFIVDWVNAREVSVLEGRFDFHDYIDHVIQMLEVLG
EECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC
PRPNVVAVCQPGPPVLAAAALMAEQNHPSRPASMTFMGSPIDARLSPTVTNQLAEEKPFT
CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCE
WFQSNMIYNVPPPYAGAGRRVYPGFVQLASFMSMNADRHQEAHRRYFNHLVSGDGDSADK
EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH
HLEFYDEYLSVLDLTEEFYLQTIDIVFQQYLLPKGELVHRGTRVKPEVITDIGLMTVEGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHCCCEEEEECC
NDDISGIGQTQAAHGLCANIPEDMKLDYVQPSVGHYGVFNGRRFREEIYPRVRKFIRKCD
CCCCCCCCCHHHHCCHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PNFGEEV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA