| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16120341
GI number: 16120341
Start: 356721
End: 356891
Strand: Direct
Name: Not Available
Synonym: VNG6475H
Alternate gene names: NA
Gene position: 356721-356891 (Clockwise)
Preceding gene: 16120340
Following gene: 16120342
Centisome position: 97.62
GC content: 54.97
Gene sequence:
>171_bases ATGGGTGAGAACTGTGATAAGTGTGGGACGGAACTTGGCTCATCTCAGGAACGCCACCAGCGGTACCGAATCGAGCATCC GTCGGATTCGGTCGAGACACTAGAAGGGCGTCTGTGCTCGGATTGTTTCTGGGAGCTCAAAGAGTGGCTCGAAACGGAGG AGGTCACGTAA
Upstream 100 bases:
>100_bases TACCACCACAGACCAAGACTGATGAATAAGCTCCCCTATCTGAACACTGCCGAACGAATAGGCCCCCAAATATTCCCCTC GTCAGCGACAATCCCTTGGT
Downstream 100 bases:
>100_bases CTGCGTTCCACCGATTGAGCGATACAGCTTCTGTCCTTACTAATCTACGCTCGAATCTAGTAGCCGTTGAGAGTTTCAAC AGAGCCCCAAATTTTCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MGENCDKCGTELGSSQERHQRYRIEHPSDSVETLEGRLCSDCFWELKEWLETEEVT
Sequences:
>Translated_56_residues MGENCDKCGTELGSSQERHQRYRIEHPSDSVETLEGRLCSDCFWELKEWLETEEVT >Mature_55_residues GENCDKCGTELGSSQERHQRYRIEHPSDSVETLEGRLCSDCFWELKEWLETEEVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6578; Mature: 6447
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENCDKCGTELGSSQERHQRYRIEHPSDSVETLEGRLCSDCFWELKEWLETEEVT CCCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GENCDKCGTELGSSQERHQRYRIEHPSDSVETLEGRLCSDCFWELKEWLETEEVT CCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA