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Identifier: 16120329

GI number: 16120329

Start: 345030

End: 346295

Strand: Reverse

Name: Not Available

Synonym: VNG6457C

Alternate gene names: 16120329

Gene position: 346295-345030 (Counterclockwise)

Preceding gene: 16120330

Following gene: 16120328

Centisome position: 94.76

GC content: 64.69

Gene sequence:

>1266_bases
ATGAGTACGACCACTGAACTCCGCCAAGGGATCCGCGAACACCTCGGGCAGTTCTCGCTGCACGTCCTGCTCGTCTTCGC
GACCGGCCTGACCATCGGTTCCGAACGGACAGTCGTCCCCGTACTCGGGGAGGACGTCCTCGGCGTCGAGTCGTTCCTTG
TGATCGGCTCGTTCGTCGTCTCGTTCGGGATCGTGAAGTCGATCCTCAATCTCTACGCCGGCAAGTGGGGCGAGGCGTAC
GGTCGCAAACCCGTCCTCATCGCCGGATGGGCGACGGCGCTCCCGCTGCCGATCATCCTCATCTTCGCCCCGAGCTGGGG
CTGGATCACGGTCGGGAACGTCCTGCTGGGGATCAACCAGGCGTTGACGTGGAGTATGGCGATCAACGCGAAGATCGACC
TCGCGGGTCCCGACCAGCGCGGGCTCGCGGTCGGCATCGACGAGGCGTTCGGCTACACTGGCGTCGCTGTCGGCGCCTGG
ATCACGGGTGTCATCGCAGGCCAGTGGAGTCTGCGGCCCGAACCGTTCTACTTCCTCGCCGTGGTCGTCGTACTGGCGTT
CCTCATCTCCATCTTCCTGATTAAGGAGACCGTCCAGTACGCCCAAGCCGAGGGTAACGACGACCACCACGACGCGAATC
TGCCGTTCAACGAGGTGCTGAAGCGCGCGACGTACGGCGACCGGACGCTGTTCGCGGCGGCGCAGGCCGGCCACATAGAG
AACTTCGTCGATACACTGTTCTGGATTGCCGTCCCGCTGTACCTGACGAGTCAGGGCCTCGGTATCGCGGCGGTTGGGGT
CGTCGTCGGTGTCCACAGTGCGATGTACTTCCTCCAGATTGCGACCGGGGGGCTCGCGGACCGCATCGGCCGCCGTCCGC
CCGTCGTTGCCGGGATGTTCCTCGCGGGCGCGGGCGTCCTCGGGATGGTGCTCGTCGATGGCTACCTCCCGTGGGCCGTC
TTGGCTGGGGTCTCCGGGCTCGGGATGGCGTTGCTGTACCCGAACCTGATGACGGTTCCGAGCGACGCAGCTCACCCGAC
TTGGCGGTCGGCGGGGATGGGCGTCTACCGGATGTGGCGTGATTCCGGCTACGCTGTCGGCGCGGTCCTGATTGGACTCT
CGATGGAGTTCGTGAATGCAGCAGCCGCGTTTTACCTGACTGCGGGCCTGATGTTTGCGTCGGGTGCAGTAGTGTACGTT
TGGATGGAGGAGACCCATCCTGACTTTGGTACGCACGAACCACCTGCGCCTGCGCCCTCCGATTGA

Upstream 100 bases:

>100_bases
CGAACGCGTCAAGCGGACGAACGTCGGGCAGGAGTCGGTCCCCGAGGAGGAACTAGCCGAACTGGAACTAGGCCCAAACA
ACTGTGCGGCCGAGTAATCC

Downstream 100 bases:

>100_bases
TAACTGACCTGTCGAAGTATCCAATTTCGACAGTATCTACGATTTTATCGCCCCTCTCTTTGGTGTTTACCTACTCGTGT
TCATTCGATAAGTTATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Tetracyclin Resistance Protein; Transporter Facilitator Family; Multidrug Drug Efflux Protein; MFS Transporter Permease; Formamidopyrimidine-DNA Glycosylase

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MSTTTELRQGIREHLGQFSLHVLLVFATGLTIGSERTVVPVLGEDVLGVESFLVIGSFVVSFGIVKSILNLYAGKWGEAY
GRKPVLIAGWATALPLPIILIFAPSWGWITVGNVLLGINQALTWSMAINAKIDLAGPDQRGLAVGIDEAFGYTGVAVGAW
ITGVIAGQWSLRPEPFYFLAVVVVLAFLISIFLIKETVQYAQAEGNDDHHDANLPFNEVLKRATYGDRTLFAAAQAGHIE
NFVDTLFWIAVPLYLTSQGLGIAAVGVVVGVHSAMYFLQIATGGLADRIGRRPPVVAGMFLAGAGVLGMVLVDGYLPWAV
LAGVSGLGMALLYPNLMTVPSDAAHPTWRSAGMGVYRMWRDSGYAVGAVLIGLSMEFVNAAAAFYLTAGLMFASGAVVYV
WMEETHPDFGTHEPPAPAPSD

Sequences:

>Translated_421_residues
MSTTTELRQGIREHLGQFSLHVLLVFATGLTIGSERTVVPVLGEDVLGVESFLVIGSFVVSFGIVKSILNLYAGKWGEAY
GRKPVLIAGWATALPLPIILIFAPSWGWITVGNVLLGINQALTWSMAINAKIDLAGPDQRGLAVGIDEAFGYTGVAVGAW
ITGVIAGQWSLRPEPFYFLAVVVVLAFLISIFLIKETVQYAQAEGNDDHHDANLPFNEVLKRATYGDRTLFAAAQAGHIE
NFVDTLFWIAVPLYLTSQGLGIAAVGVVVGVHSAMYFLQIATGGLADRIGRRPPVVAGMFLAGAGVLGMVLVDGYLPWAV
LAGVSGLGMALLYPNLMTVPSDAAHPTWRSAGMGVYRMWRDSGYAVGAVLIGLSMEFVNAAAAFYLTAGLMFASGAVVYV
WMEETHPDFGTHEPPAPAPSD
>Mature_420_residues
STTTELRQGIREHLGQFSLHVLLVFATGLTIGSERTVVPVLGEDVLGVESFLVIGSFVVSFGIVKSILNLYAGKWGEAYG
RKPVLIAGWATALPLPIILIFAPSWGWITVGNVLLGINQALTWSMAINAKIDLAGPDQRGLAVGIDEAFGYTGVAVGAWI
TGVIAGQWSLRPEPFYFLAVVVVLAFLISIFLIKETVQYAQAEGNDDHHDANLPFNEVLKRATYGDRTLFAAAQAGHIEN
FVDTLFWIAVPLYLTSQGLGIAAVGVVVGVHSAMYFLQIATGGLADRIGRRPPVVAGMFLAGAGVLGMVLVDGYLPWAVL
AGVSGLGMALLYPNLMTVPSDAAHPTWRSAGMGVYRMWRDSGYAVGAVLIGLSMEFVNAAAAFYLTAGLMFASGAVVYVW
MEETHPDFGTHEPPAPAPSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44812; Mature: 44680

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTELRQGIREHLGQFSLHVLLVFATGLTIGSERTVVPVLGEDVLGVESFLVIGSFVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHHHHHHHHHHHHHH
SFGIVKSILNLYAGKWGEAYGRKPVLIAGWATALPLPIILIFAPSWGWITVGNVLLGINQ
HHHHHHHHHHHHCCCCCHHHCCCCEEEECCHHHCCCEEEEEEECCCCCEEHHHHHHHCCH
ALTWSMAINAKIDLAGPDQRGLAVGIDEAFGYTGVAVGAWITGVIAGQWSLRPEPFYFLA
HEEEEEEEEEEEEECCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
VVVVLAFLISIFLIKETVQYAQAEGNDDHHDANLPFNEVLKRATYGDRTLFAAAQAGHIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHCHHH
NFVDTLFWIAVPLYLTSQGLGIAAVGVVVGVHSAMYFLQIATGGLADRIGRRPPVVAGMF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH
LAGAGVLGMVLVDGYLPWAVLAGVSGLGMALLYPNLMTVPSDAAHPTWRSAGMGVYRMWR
HHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHCCCCEECCCCCCCCCHHHCCCCHHHHHH
DSGYAVGAVLIGLSMEFVNAAAAFYLTAGLMFASGAVVYVWMEETHPDFGTHEPPAPAPS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure 
STTTELRQGIREHLGQFSLHVLLVFATGLTIGSERTVVPVLGEDVLGVESFLVIGSFVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCHHHHHHHHHHHHHHH
SFGIVKSILNLYAGKWGEAYGRKPVLIAGWATALPLPIILIFAPSWGWITVGNVLLGINQ
HHHHHHHHHHHHCCCCCHHHCCCCEEEECCHHHCCCEEEEEEECCCCCEEHHHHHHHCCH
ALTWSMAINAKIDLAGPDQRGLAVGIDEAFGYTGVAVGAWITGVIAGQWSLRPEPFYFLA
HEEEEEEEEEEEEECCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
VVVVLAFLISIFLIKETVQYAQAEGNDDHHDANLPFNEVLKRATYGDRTLFAAAQAGHIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHCHHH
NFVDTLFWIAVPLYLTSQGLGIAAVGVVVGVHSAMYFLQIATGGLADRIGRRPPVVAGMF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH
LAGAGVLGMVLVDGYLPWAVLAGVSGLGMALLYPNLMTVPSDAAHPTWRSAGMGVYRMWR
HHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHCCCCEECCCCCCCCCHHHCCCCHHHHHH
DSGYAVGAVLIGLSMEFVNAAAAFYLTAGLMFASGAVVYVWMEETHPDFGTHEPPAPAPS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA