Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120320

GI number: 16120320

Start: 339116

End: 339496

Strand: Reverse

Name: Not Available

Synonym: VNG6448H

Alternate gene names: NA

Gene position: 339496-339116 (Counterclockwise)

Preceding gene: 16120323

Following gene: 16120319

Centisome position: 92.9

GC content: 50.92

Gene sequence:

>381_bases
ATGGTCTCTGGCTGGCAGGTAATCCGAGTGGCGTGCATCTTATCTGTGTCTGTCGGCGTGGGCTTACTCGCTATTTCGAT
TTCTCTCGGCCTAACAGCGGGTACAGCACCGCCAGTACTAGTCGGATTCGGTGGGTCAGTCTGTACGGCGTATCTCTTGC
TCCGGAAGCACCCTAATATCGAGACTGGGCCTCTGTGGCGGTTCAGTGGTCTTGTTTTTGTACTGTTCATTCTTGGGAAT
GCCGTTTCCACAGAGGGTATCTATGCCCCTCAAAGTGAGCAATCGCCGCTCGCAATTGGTGGTGTATGGGCTCTTTCACT
ACTGATTTGCTACACGGTGATATTTAAAGTGGAATGGACGAATCGTTCTCCTTCTCAATAA

Upstream 100 bases:

>100_bases
AGTTAAGGAGAACCCATCTCGATGTGGTGCGACATTTCGCTAAGTACAGAGGGTTTAATGAATGGCGTAGGCTTTTCTTG
GCCGAAGGGATAAGTCTGGT

Downstream 100 bases:

>100_bases
CCGTCTGGTAGATTTGTACACCTACTGAGCGGCTGTTTCATTCAGGATTCGCTGGTAAGAATTCGCCTCAATGTGATGCG
TAACTTCGCTAAGTACAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MVSGWQVIRVACILSVSVGVGLLAISISLGLTAGTAPPVLVGFGGSVCTAYLLLRKHPNIETGPLWRFSGLVFVLFILGN
AVSTEGIYAPQSEQSPLAIGGVWALSLLICYTVIFKVEWTNRSPSQ

Sequences:

>Translated_126_residues
MVSGWQVIRVACILSVSVGVGLLAISISLGLTAGTAPPVLVGFGGSVCTAYLLLRKHPNIETGPLWRFSGLVFVLFILGN
AVSTEGIYAPQSEQSPLAIGGVWALSLLICYTVIFKVEWTNRSPSQ
>Mature_126_residues
MVSGWQVIRVACILSVSVGVGLLAISISLGLTAGTAPPVLVGFGGSVCTAYLLLRKHPNIETGPLWRFSGLVFVLFILGN
AVSTEGIYAPQSEQSPLAIGGVWALSLLICYTVIFKVEWTNRSPSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13319; Mature: 13319

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSGWQVIRVACILSVSVGVGLLAISISLGLTAGTAPPVLVGFGGSVCTAYLLLRKHPNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCC
ETGPLWRFSGLVFVLFILGNAVSTEGIYAPQSEQSPLAIGGVWALSLLICYTVIFKVEWT
CCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHEEEEC
NRSPSQ
CCCCCC
>Mature Secondary Structure
MVSGWQVIRVACILSVSVGVGLLAISISLGLTAGTAPPVLVGFGGSVCTAYLLLRKHPNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCC
ETGPLWRFSGLVFVLFILGNAVSTEGIYAPQSEQSPLAIGGVWALSLLICYTVIFKVEWT
CCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHEEEEC
NRSPSQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA