| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120309
GI number: 16120309
Start: 328989
End: 329141
Strand: Direct
Name: Not Available
Synonym: VNG6434H
Alternate gene names: NA
Gene position: 328989-329141 (Clockwise)
Preceding gene: 16120308
Following gene: 16120310
Centisome position: 90.03
GC content: 62.09
Gene sequence:
>153_bases ATGCCCACCGATGACTCGTCGCTCGGTCAGTGCTCAGAGTGCGGCGACCGAATTGCTGCCGCATGGCTCCTCGTTGAATA CAGCAAAGACGACGGGACTGACGGTGTCTGGGCGGAGTGCCCAGCATGCGAGGCTGTCGTCGCCCCAGAGTAA
Upstream 100 bases:
>100_bases ATCCGGGGTCAACAACCTGTGAACCTACCAAACGCTTACCTTCTGGAACGCGTGCTATGCACGTGGAGGGGCCTGTCACA CGCTCCTTCCACCCCTAGGC
Downstream 100 bases:
>100_bases CCAGACAGCACCCTCAAGTGGCCGTCACGTCGTATCTCGACCAGAACACGAATCATGGAGATTCCATCGCAACTGCGGTG TCTGTTCGCTGGCGCTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MPTDDSSLGQCSECGDRIAAAWLLVEYSKDDGTDGVWAECPACEAVVAPE
Sequences:
>Translated_50_residues MPTDDSSLGQCSECGDRIAAAWLLVEYSKDDGTDGVWAECPACEAVVAPE >Mature_49_residues PTDDSSLGQCSECGDRIAAAWLLVEYSKDDGTDGVWAECPACEAVVAPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5263; Mature: 5132
Theoretical pI: Translated: 3.47; Mature: 3.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDDSSLGQCSECGDRIAAAWLLVEYSKDDGTDGVWAECPACEAVVAPE CCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure PTDDSSLGQCSECGDRIAAAWLLVEYSKDDGTDGVWAECPACEAVVAPE CCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA