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The map label for this gene is npa

Identifier: 16120258

GI number: 16120258

Start: 287504

End: 288844

Strand: Direct

Name: npa

Synonym: VNG6361G

Alternate gene names: NA

Gene position: 287504-288844 (Clockwise)

Preceding gene: 16120257

Following gene: 16120259

Centisome position: 78.68

GC content: 59.28

Gene sequence:

>1341_bases
ATGAAGCGCACCAACACGTTCGCCGTGCGACCGCTCTCCGAGACCGGAGAGCAACTGTTACGGGACCTGTTGGACGCTTC
TGCCGCCCTCTGGAACGAAGTTAACTACCAACGCCTTATGCGGTACAACGACGAGGACGGCTTTGAAGGCGGCATATGGG
ACGCCGATACCGGCCGACTCGAAGGCCGATACAAAGGCGTGCTCGGGGCGTCTACAGCTCAACAGGTGATACGCAAAAAC
AGCGAAGCGTGGCGCAGTTTCTCGCATCTGAAAGACCAGTACCACGACGAGTCGAACACGTCGGTTACGGAACATCCTAA
CCCGCCGGGATTCCGTGGCAACGAGGACGACGGACGCCAACTCAGAACCGTCATTCGTAACGACGCATACACGACTGAGT
GGGGCGATCGGTCTCGGCTTGAGATTCTGGTCGGCAGCGAGCTGAAGGACCGATACGATCACACCGGCCGCCTCCGACTC
GAAATCGCTGGTAACCCGAATTGGCCCGACTACGAAAAACAGGGCCGGTTGGAGCTATGGTACGACGAGACTGAAAGCAC
CTTCCGAGCTTCCCAACCCGTGACTGTGCCTGATAGTGCACGGGCAACTCCACTGGCCGATGAAACGGCCGCTCTGGACA
TCGGTGCGAACAATCTCGTCGCCTGTACCACCACGACCGGCGAGCAATACCTGTACGAAGGCCGCGAATTGTTCCAGCGG
TTCCGTGAGACGACACGAGAGATTGCCCGGTTGCAGTCCAAGCTCCCGGAAGGCCGGTACAGTAGCGAGCGTATCCGGCG
ACTGTACCGCAAACGCACCCGCCGCCGCGACCACGCTCAAGAAGCACTGTGTCGTGACCTGTTGGACCGACTGTACGCCG
AGGGCGTGGATACGGTGTATATCGGCGGGTTGACCGACGTGCTGGACACACACTGGTCGGTCAAAACCAACGCCAAGACC
CACAACTTCTGGGCGTTCAAGAAGTTCACAGAGCGATTAGCGTGTACCGCAGAGGAATACGGGATTTCGGTCGAGGTTCG
ATCGGAAGCGTGGACGAGTCAGGAATGTCCACGGTGTGGATCGACTGACCGAACGACGCGGCATCAAGACACGCTCACCT
GTCCGTGTGGGTTCCAGGGGCACGCCGACCTAACCGCGTCAGAGACGTTTCTCGAGCGGCACACAAAACAGGCAGTCAGG
CCGATGGCACGGCCCGTGCGGTTCCAGTGGGACGACCACACCTGGTCGGAGTCACCACGCTCTCAAGAAAGTCCTAAAGA
ACAGCGCACAGACCCGAGTACCGTTCACCACGGAAATGTTGCCCTCAGGGAATCGGCATAG

Upstream 100 bases:

>100_bases
TTCCTTCTGGTCAGAAGCCTCCAACGTAGCGACTCCAGTTTTACTTTCACTCCGGCTGGACAGTGTTTACGTTTCGACGG
AACAGATCAATAGGTGGTAG

Downstream 100 bases:

>100_bases
CCGAAAACTCCACAGAGGAAACCGCGCCGTAGAAGGCGCGGAGGATGTCAAACTCCACGCTTCTACGTCTTCCCTCACTC
CCCAGAGGCCGACCTCGACC

Product: transposase

Products: NA

Alternate protein names: IS Element ISTsi3 OrfB Probably Transposase; Transposase ISC; Neutral Protease; Transposase And Inactivated Derivatives; IS Element ISDka2 OrfB; ISChy8 Transposase

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKRTNTFAVRPLSETGEQLLRDLLDASAALWNEVNYQRLMRYNDEDGFEGGIWDADTGRLEGRYKGVLGASTAQQVIRKN
SEAWRSFSHLKDQYHDESNTSVTEHPNPPGFRGNEDDGRQLRTVIRNDAYTTEWGDRSRLEILVGSELKDRYDHTGRLRL
EIAGNPNWPDYEKQGRLELWYDETESTFRASQPVTVPDSARATPLADETAALDIGANNLVACTTTTGEQYLYEGRELFQR
FRETTREIARLQSKLPEGRYSSERIRRLYRKRTRRRDHAQEALCRDLLDRLYAEGVDTVYIGGLTDVLDTHWSVKTNAKT
HNFWAFKKFTERLACTAEEYGISVEVRSEAWTSQECPRCGSTDRTTRHQDTLTCPCGFQGHADLTASETFLERHTKQAVR
PMARPVRFQWDDHTWSESPRSQESPKEQRTDPSTVHHGNVALRESA

Sequences:

>Translated_446_residues
MKRTNTFAVRPLSETGEQLLRDLLDASAALWNEVNYQRLMRYNDEDGFEGGIWDADTGRLEGRYKGVLGASTAQQVIRKN
SEAWRSFSHLKDQYHDESNTSVTEHPNPPGFRGNEDDGRQLRTVIRNDAYTTEWGDRSRLEILVGSELKDRYDHTGRLRL
EIAGNPNWPDYEKQGRLELWYDETESTFRASQPVTVPDSARATPLADETAALDIGANNLVACTTTTGEQYLYEGRELFQR
FRETTREIARLQSKLPEGRYSSERIRRLYRKRTRRRDHAQEALCRDLLDRLYAEGVDTVYIGGLTDVLDTHWSVKTNAKT
HNFWAFKKFTERLACTAEEYGISVEVRSEAWTSQECPRCGSTDRTTRHQDTLTCPCGFQGHADLTASETFLERHTKQAVR
PMARPVRFQWDDHTWSESPRSQESPKEQRTDPSTVHHGNVALRESA
>Mature_446_residues
MKRTNTFAVRPLSETGEQLLRDLLDASAALWNEVNYQRLMRYNDEDGFEGGIWDADTGRLEGRYKGVLGASTAQQVIRKN
SEAWRSFSHLKDQYHDESNTSVTEHPNPPGFRGNEDDGRQLRTVIRNDAYTTEWGDRSRLEILVGSELKDRYDHTGRLRL
EIAGNPNWPDYEKQGRLELWYDETESTFRASQPVTVPDSARATPLADETAALDIGANNLVACTTTTGEQYLYEGRELFQR
FRETTREIARLQSKLPEGRYSSERIRRLYRKRTRRRDHAQEALCRDLLDRLYAEGVDTVYIGGLTDVLDTHWSVKTNAKT
HNFWAFKKFTERLACTAEEYGISVEVRSEAWTSQECPRCGSTDRTTRHQDTLTCPCGFQGHADLTASETFLERHTKQAVR
PMARPVRFQWDDHTWSESPRSQESPKEQRTDPSTVHHGNVALRESA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51346; Mature: 51346

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTNTFAVRPLSETGEQLLRDLLDASAALWNEVNYQRLMRYNDEDGFEGGIWDADTGRL
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCC
EGRYKGVLGASTAQQVIRKNSEAWRSFSHLKDQYHDESNTSVTEHPNPPGFRGNEDDGRQ
CCHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
LRTVIRNDAYTTEWGDRSRLEILVGSELKDRYDHTGRLRLEIAGNPNWPDYEKQGRLELW
HHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEE
YDETESTFRASQPVTVPDSARATPLADETAALDIGANNLVACTTTTGEQYLYEGRELFQR
ECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHH
FRETTREIARLQSKLPEGRYSSERIRRLYRKRTRRRDHAQEALCRDLLDRLYAEGVDTVY
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGGLTDVLDTHWSVKTNAKTHNFWAFKKFTERLACTAEEYGISVEVRSEAWTSQECPRCG
ECCHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
STDRTTRHQDTLTCPCGFQGHADLTASETFLERHTKQAVRPMARPVRFQWDDHTWSESPR
CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
SQESPKEQRTDPSTVHHGNVALRESA
CCCCCHHHCCCCCCEECCCEEEECCC
>Mature Secondary Structure
MKRTNTFAVRPLSETGEQLLRDLLDASAALWNEVNYQRLMRYNDEDGFEGGIWDADTGRL
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCC
EGRYKGVLGASTAQQVIRKNSEAWRSFSHLKDQYHDESNTSVTEHPNPPGFRGNEDDGRQ
CCHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
LRTVIRNDAYTTEWGDRSRLEILVGSELKDRYDHTGRLRLEIAGNPNWPDYEKQGRLELW
HHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEE
YDETESTFRASQPVTVPDSARATPLADETAALDIGANNLVACTTTTGEQYLYEGRELFQR
ECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHH
FRETTREIARLQSKLPEGRYSSERIRRLYRKRTRRRDHAQEALCRDLLDRLYAEGVDTVY
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGGLTDVLDTHWSVKTNAKTHNFWAFKKFTERLACTAEEYGISVEVRSEAWTSQECPRCG
ECCHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
STDRTTRHQDTLTCPCGFQGHADLTASETFLERHTKQAVRPMARPVRFQWDDHTWSESPR
CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
SQESPKEQRTDPSTVHHGNVALRESA
CCCCCHHHCCCCCCEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA