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Identifier: 16120216

GI number: 16120216

Start: 236436

End: 237209

Strand: Reverse

Name: Not Available

Synonym: VNG6305C

Alternate gene names: 16120216

Gene position: 237209-236436 (Counterclockwise)

Preceding gene: 16120217

Following gene: 16120215

Centisome position: 64.91

GC content: 66.28

Gene sequence:

>774_bases
ATGCCGGTCAGCGAAACCACGGACCGGCAGGCGAGCAACGGTGGTGACGGGCCGGCGCTTCCGATCAACGAGCTGTTTTA
CTCCCTGCAGGGCGAGGGGAAGCTCGCCGGCACGCCGTCGGTGTTCGTCCGCACGAGCGGCTGCAACCTCCGGTGTTGGT
TCTGTGATTCATACCACACGTCCTGGGAGCCCACCCACGCCACGATGTCCGTCGACGACATCATCGCGGAGGTGCAGTCG
TACGAGCACGCCGACCACGTCGTACTCACCGGTGGCGAGCCACTGCTCCACGACGACGCCGTGGTGCTGCTTGACCGCCT
CGCAGCGCTTGGCTACCACACCACCGTCGAGACGAACGGCACCATCCACCGTGACGCCCCCATCGACTTGGCGAGCGTCA
GCCCGAAACTCGCCTCCAGCACACCCACGGCCGAGACCGACCCCAAAGGCGACGGTGAGTGGGCGGCCCGCCACGACGCC
CGCCGCATCGACGTGGCGACGCTCGGCGCGCTCGCCGACGACTACGACACCCAACTCAAGTTCGTCGTCACCGATCCGTC
GGATATGCCCGAGATCGAATCACTGCTTGCGGAGATCAGGACAGCCACTGACACCCGAATCGGCGACGAGGACGTGGTGT
TGATGCCGGAGGGCACAACCCACGCGGAGCTCGACGCGCGACGAAACGAGGTTGCGACACTCGCGATGGAGCACGGCTAC
CGGTATACGCCGCGGCTCCACGTTGCACTGTGGAACGACGCCCCGGAGACCTGA

Upstream 100 bases:

>100_bases
TCGTGCTGGAGCGGAAGCTCCACGACGCGCTCCCTGAGACGGTGTCAGCGGTCTCCGTCACGGTCGCGGAAACGCCGGCG
CTTACTGCTGGCCCGAACTG

Downstream 100 bases:

>100_bases
AACAATGACAGACTCCACTGACGATACGATCGACACGAACGCACGCGCTCGGCGCGACCGCACAGCGACGACCAACCGCA
GAACGGCCGCGGGTGCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPVSETTDRQASNGGDGPALPINELFYSLQGEGKLAGTPSVFVRTSGCNLRCWFCDSYHTSWEPTHATMSVDDIIAEVQS
YEHADHVVLTGGEPLLHDDAVVLLDRLAALGYHTTVETNGTIHRDAPIDLASVSPKLASSTPTAETDPKGDGEWAARHDA
RRIDVATLGALADDYDTQLKFVVTDPSDMPEIESLLAEIRTATDTRIGDEDVVLMPEGTTHAELDARRNEVATLAMEHGY
RYTPRLHVALWNDAPET

Sequences:

>Translated_257_residues
MPVSETTDRQASNGGDGPALPINELFYSLQGEGKLAGTPSVFVRTSGCNLRCWFCDSYHTSWEPTHATMSVDDIIAEVQS
YEHADHVVLTGGEPLLHDDAVVLLDRLAALGYHTTVETNGTIHRDAPIDLASVSPKLASSTPTAETDPKGDGEWAARHDA
RRIDVATLGALADDYDTQLKFVVTDPSDMPEIESLLAEIRTATDTRIGDEDVVLMPEGTTHAELDARRNEVATLAMEHGY
RYTPRLHVALWNDAPET
>Mature_256_residues
PVSETTDRQASNGGDGPALPINELFYSLQGEGKLAGTPSVFVRTSGCNLRCWFCDSYHTSWEPTHATMSVDDIIAEVQSY
EHADHVVLTGGEPLLHDDAVVLLDRLAALGYHTTVETNGTIHRDAPIDLASVSPKLASSTPTAETDPKGDGEWAARHDAR
RIDVATLGALADDYDTQLKFVVTDPSDMPEIESLLAEIRTATDTRIGDEDVVLMPEGTTHAELDARRNEVATLAMEHGYR
YTPRLHVALWNDAPET

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789139, Length=139, Percent_Identity=38.8489208633094, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 27994; Mature: 27863

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSETTDRQASNGGDGPALPINELFYSLQGEGKLAGTPSVFVRTSGCNLRCWFCDSYHT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCEEEEEECCCEEEEEEECCCCC
SWEPTHATMSVDDIIAEVQSYEHADHVVLTGGEPLLHDDAVVLLDRLAALGYHTTVETNG
CCCCCEEEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCC
TIHRDAPIDLASVSPKLASSTPTAETDPKGDGEWAARHDARRIDVATLGALADDYDTQLK
EEECCCCCCHHHCCCHHCCCCCCCCCCCCCCCCHHHHCCCCEECHHHHHHHHCCCCCEEE
FVVTDPSDMPEIESLLAEIRTATDTRIGDEDVVLMPEGTTHAELDARRNEVATLAMEHGY
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEHHHCCC
RYTPRLHVALWNDAPET
EECCEEEEEEECCCCCC
>Mature Secondary Structure 
PVSETTDRQASNGGDGPALPINELFYSLQGEGKLAGTPSVFVRTSGCNLRCWFCDSYHT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCEEEEEECCCEEEEEEECCCCC
SWEPTHATMSVDDIIAEVQSYEHADHVVLTGGEPLLHDDAVVLLDRLAALGYHTTVETNG
CCCCCEEEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCC
TIHRDAPIDLASVSPKLASSTPTAETDPKGDGEWAARHDARRIDVATLGALADDYDTQLK
EEECCCCCCHHHCCCHHCCCCCCCCCCCCCCCCHHHHCCCCEECHHHHHHHHCCCCCEEE
FVVTDPSDMPEIESLLAEIRTATDTRIGDEDVVLMPEGTTHAELDARRNEVATLAMEHGY
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEHHHCCC
RYTPRLHVALWNDAPET
EECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]