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Identifier: 16120210

GI number: 16120210

Start: 228687

End: 229883

Strand: Direct

Name: Not Available

Synonym: VNG6297C

Alternate gene names: NA

Gene position: 228687-229883 (Clockwise)

Preceding gene: 16120207

Following gene: 16120211

Centisome position: 62.58

GC content: 54.3

Gene sequence:

>1197_bases
ATGGTAGATTCGATCTGTACACGTCGCCGTCTGTTAGCAGCAGTTGGGGCGACATCGGTGAGTGCGGTAGCCGGCTGCAG
TAGCACTCTATTCGGCGGAGACGTTGAATACATACAGGATGCCCCGGTTGGGGAGGTGACTGGTCCGTGGCCGACGTATC
AACACGATTTCGCGAGAACCGGTGCAACAACCGATCCTGGCCCTTCGAGTGATGCAACCGAATCGACTGTACTTGAGCTA
TTCAATCTGCACCCCGACTCACAGGTGATGTTTACCGGTGACCGTGGCATCCTTGCACTCACTCCAGATGAATTCGGAGG
TTCGTACACCTCATTCGACATCAACGAAAACACACGATCCTGGAATGTAGAGACAACCGGCAGCGGTGGATCGGTGACAA
TCGCTGGGAACGCGGCTTTCGCCTCAACAAGCAGAGGCATCCGCGTCTACGATATTCGAAGTGGTGACCTTTGCTGGCGG
GCGAACACAGGTTCCCCATTCCTGGGCAATGCACCTGTTTTCGTCAGTGGCAAGATTCTCAGTTGGGACTCCTCCTCGGT
CGTCGCGTACGACGCCACGACGGGGCAGAAACGCTGGACGTTCAGCTTTGAAGACACCGGACCCAATAGTGTAGGGCTTC
GGGACGGGATCGTGTATATCCAACTTGAAACAGGCGTTGCAGCGGTTGATCCTGAATCTGGTGATCAGGTCTGGCGGCGG
TCCCTCCTCCCTGAGACAGACCAACAGATCGTTATTGGTGATGAAAGCGTGTATTATTCCGCAGAAGGTGGGAAGCTGTA
TGCGTTATCGACGGAACGGGAGGGTGAAACACAGTGGAAAACATCCATTCCAAACGAGTATGGTCATTCGCTCGCCGTTA
GCAATAATCGAATCCACGTGTCTGCCTCCGATTCGTCTGATCGTGGCGTTCTCACGACCTTGGACGCTGCGGATGGAAGC
ACAATCAACATCGAGAAGCATCCCGATGGCCGTACATCACCGCCAATCGTTGCTGATGGGACCCAGTTCTGGCTTGGGGA
GGAGACACTGTATGCGTCCGACGCTGATACCGGTTCTCGCAAGTGGTCATTGGATGTGAATGCCACGGTAGAGTCTTATT
CTTCGCTGTCAGTTCATGGGTCTGACCTGTTCTTTGCCAGTAGAAATGGCGTGGTAAAGATCTCTGACGGCGCGTAA

Upstream 100 bases:

>100_bases
GCTGTGACTGCCCCTCGATCCGTGTTATCGACATCGCGTTTTCGCACCGTTAACTCCTTCACAACACAAGATATTTACTT
TGTTCTTATATGTTTTAACT

Downstream 100 bases:

>100_bases
GCGGCTCGAACCGATCGCACCCCCAGTTTTCACTGTCACAGCGATCCTGCTCTCTCGGTGGCTCTATTCACGGAGCCAAC
ACCAAGACAAAACTATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Surface Protein; PQQ Repeat Domain Protein; PQQ Repeat Protein; PQQ Repeat-Containing Protein; Transmembrane Serine/Threonine Protein Kinase D

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MVDSICTRRRLLAAVGATSVSAVAGCSSTLFGGDVEYIQDAPVGEVTGPWPTYQHDFARTGATTDPGPSSDATESTVLEL
FNLHPDSQVMFTGDRGILALTPDEFGGSYTSFDINENTRSWNVETTGSGGSVTIAGNAAFASTSRGIRVYDIRSGDLCWR
ANTGSPFLGNAPVFVSGKILSWDSSSVVAYDATTGQKRWTFSFEDTGPNSVGLRDGIVYIQLETGVAAVDPESGDQVWRR
SLLPETDQQIVIGDESVYYSAEGGKLYALSTEREGETQWKTSIPNEYGHSLAVSNNRIHVSASDSSDRGVLTTLDAADGS
TINIEKHPDGRTSPPIVADGTQFWLGEETLYASDADTGSRKWSLDVNATVESYSSLSVHGSDLFFASRNGVVKISDGA

Sequences:

>Translated_398_residues
MVDSICTRRRLLAAVGATSVSAVAGCSSTLFGGDVEYIQDAPVGEVTGPWPTYQHDFARTGATTDPGPSSDATESTVLEL
FNLHPDSQVMFTGDRGILALTPDEFGGSYTSFDINENTRSWNVETTGSGGSVTIAGNAAFASTSRGIRVYDIRSGDLCWR
ANTGSPFLGNAPVFVSGKILSWDSSSVVAYDATTGQKRWTFSFEDTGPNSVGLRDGIVYIQLETGVAAVDPESGDQVWRR
SLLPETDQQIVIGDESVYYSAEGGKLYALSTEREGETQWKTSIPNEYGHSLAVSNNRIHVSASDSSDRGVLTTLDAADGS
TINIEKHPDGRTSPPIVADGTQFWLGEETLYASDADTGSRKWSLDVNATVESYSSLSVHGSDLFFASRNGVVKISDGA
>Mature_398_residues
MVDSICTRRRLLAAVGATSVSAVAGCSSTLFGGDVEYIQDAPVGEVTGPWPTYQHDFARTGATTDPGPSSDATESTVLEL
FNLHPDSQVMFTGDRGILALTPDEFGGSYTSFDINENTRSWNVETTGSGGSVTIAGNAAFASTSRGIRVYDIRSGDLCWR
ANTGSPFLGNAPVFVSGKILSWDSSSVVAYDATTGQKRWTFSFEDTGPNSVGLRDGIVYIQLETGVAAVDPESGDQVWRR
SLLPETDQQIVIGDESVYYSAEGGKLYALSTEREGETQWKTSIPNEYGHSLAVSNNRIHVSASDSSDRGVLTTLDAADGS
TINIEKHPDGRTSPPIVADGTQFWLGEETLYASDADTGSRKWSLDVNATVESYSSLSVHGSDLFFASRNGVVKISDGA

Specific function: Unknown

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42398; Mature: 42398

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSICTRRRLLAAVGATSVSAVAGCSSTLFGGDVEYIQDAPVGEVTGPWPTYQHDFART
CCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCHHHHC
GATTDPGPSSDATESTVLELFNLHPDSQVMFTGDRGILALTPDEFGGSYTSFDINENTRS
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEECCHHHCCCEEEEEECCCCEE
WNVETTGSGGSVTIAGNAAFASTSRGIRVYDIRSGDLCWRANTGSPFLGNAPVFVSGKIL
EEEEECCCCCEEEEECCCEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEE
SWDSSSVVAYDATTGQKRWTFSFEDTGPNSVGLRDGIVYIQLETGVAAVDPESGDQVWRR
EECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHH
SLLPETDQQIVIGDESVYYSAEGGKLYALSTEREGETQWKTSIPNEYGHSLAVSNNRIHV
HCCCCCCCEEEEECCEEEEECCCCEEEEEECCCCCCCEEECCCCHHHCCEEEEECCEEEE
SASDSSDRGVLTTLDAADGSTINIEKHPDGRTSPPIVADGTQFWLGEETLYASDADTGSR
EECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCEEEECCCEEEECCCCCCCE
KWSLDVNATVESYSSLSVHGSDLFFASRNGVVKISDGA
EEEEEECCEECCCCEEEEECCEEEEECCCCEEEECCCC
>Mature Secondary Structure
MVDSICTRRRLLAAVGATSVSAVAGCSSTLFGGDVEYIQDAPVGEVTGPWPTYQHDFART
CCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCHHHHC
GATTDPGPSSDATESTVLELFNLHPDSQVMFTGDRGILALTPDEFGGSYTSFDINENTRS
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEECCHHHCCCEEEEEECCCCEE
WNVETTGSGGSVTIAGNAAFASTSRGIRVYDIRSGDLCWRANTGSPFLGNAPVFVSGKIL
EEEEECCCCCEEEEECCCEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEE
SWDSSSVVAYDATTGQKRWTFSFEDTGPNSVGLRDGIVYIQLETGVAAVDPESGDQVWRR
EECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHH
SLLPETDQQIVIGDESVYYSAEGGKLYALSTEREGETQWKTSIPNEYGHSLAVSNNRIHV
HCCCCCCCEEEEECCEEEEECCCCEEEEEECCCCCCCEEECCCCHHHCCEEEEECCEEEE
SASDSSDRGVLTTLDAADGSTINIEKHPDGRTSPPIVADGTQFWLGEETLYASDADTGSR
EECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCEEEECCCEEEECCCCCCCE
KWSLDVNATVESYSSLSVHGSDLFFASRNGVVKISDGA
EEEEEECCEECCCCEEEEECCEEEEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA