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The map label for this gene is ugpA

Identifier: 16120196

GI number: 16120196

Start: 214632

End: 215525

Strand: Direct

Name: ugpA

Synonym: VNG6279G

Alternate gene names: 16120196

Gene position: 214632-215525 (Clockwise)

Preceding gene: 16120195

Following gene: 16120197

Centisome position: 58.73

GC content: 61.86

Gene sequence:

>894_bases
ATGTCCACACAGCCAACCCCATTCGATTCGACACTGCAGGCCCTGGGACTGCTGCTCCCCTCCGTGGTCGTGCTCGGTGC
GTTCCTCTACTATCCGGGCCTCGAGACGTTCCGACTCAGCCTGTACAGAACCCTGTTCCTCGGGCAGCAGACCGCCTGGG
TCGGCGCGGAGAACTTCGTTCAGCTGCTGACCTCAACCGCCTACCACCACAGCTTCGCGATCTCTGTCCTGTTCGCAGCC
ATCGTCGTCACCGGAACCCTCCTGCTGTCGATCGCGGTCGGATATCTCCTCTTCACCGTGTCCGTCGGTTCGTCGGCGTA
CCTCATCGCCGCCATCTGGCCGTACGCGCTGCCGCCGGCCGTCGCCGCGATCCTGTTGAACTTCATCCTACACCCGAACC
TCGGTGTGTTCACCCACTACCTCGAAGCGGTCACCCCGTTCACCTTAGACTGGTTCAACAGCGGCCCGCAGGCGTTCACC
GTCGTCGCCGTCGTCGCGATCTGGAAGCAGCTCGGATACAACATCATCTTCGTCGTTGCCGCGTTCAACACGATCCCCAA
AACGCTCACCGAACGCGCCACGCTCGACGGGGTTGGCCACCTCAGACGCCTCCGGAGCGTCTACCTCCCGCTGATGGCAC
CAACGCTGGTCTTCCTCACGGTGATGAACACGATCTACGCGTTCTTCTCCACGTTCCCGATCGTGGACCTCCTCACCAGC
GGCGGTCCGGGCGACGCAACCAATCTCCTGATATTCAAGCTCTACCGCGACGCCTTCGAGTTCAACAGCCTGGGCTTGGC
GTCGGCCGAGTCAGTCATCCTGTTCGCCCTGGTCGCGGTACTGATGTACGTCCAAATCCGCGTTTCAGAGGGATACGCAC
AGTATGGGGCGTGA

Upstream 100 bases:

>100_bases
TGTCCGTTTCGGCGGGCCTCGCAGAGATGGACACCCAAGCGACCAGCGCCATCCAGGACTACACCGACTCCATCGACGAC
AGCGCGTAACCCGACCACCC

Downstream 100 bases:

>100_bases
TACAATGGCCACTGACACCGCCCAGTCTTCGACCCGGACGACCCACCGTGACATCCTCCCCGAGAACGCTCTGATGCACC
TGGGGCTGTTCGGCGCGATC

Product: sn-glycerol-3-phosphate transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSTQPTPFDSTLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQQTAWVGAENFVQLLTSTAYHHSFAISVLFAA
IVVTGTLLLSIAVGYLLFTVSVGSSAYLIAAIWPYALPPAVAAILLNFILHPNLGVFTHYLEAVTPFTLDWFNSGPQAFT
VVAVVAIWKQLGYNIIFVVAAFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTS
GGPGDATNLLIFKLYRDAFEFNSLGLASAESVILFALVAVLMYVQIRVSEGYAQYGA

Sequences:

>Translated_297_residues
MSTQPTPFDSTLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQQTAWVGAENFVQLLTSTAYHHSFAISVLFAA
IVVTGTLLLSIAVGYLLFTVSVGSSAYLIAAIWPYALPPAVAAILLNFILHPNLGVFTHYLEAVTPFTLDWFNSGPQAFT
VVAVVAIWKQLGYNIIFVVAAFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTS
GGPGDATNLLIFKLYRDAFEFNSLGLASAESVILFALVAVLMYVQIRVSEGYAQYGA
>Mature_296_residues
STQPTPFDSTLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQQTAWVGAENFVQLLTSTAYHHSFAISVLFAAI
VVTGTLLLSIAVGYLLFTVSVGSSAYLIAAIWPYALPPAVAAILLNFILHPNLGVFTHYLEAVTPFTLDWFNSGPQAFTV
VAVVAIWKQLGYNIIFVVAAFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTSG
GPGDATNLLIFKLYRDAFEFNSLGLASAESVILFALVAVLMYVQIRVSEGYAQYGA

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=298, Percent_Identity=38.9261744966443, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787570, Length=250, Percent_Identity=29.6, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790465, Length=253, Percent_Identity=26.8774703557312, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32386; Mature: 32255

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQPTPFDSTLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQQTAWVGAENFV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCHHHHH
QLLTSTAYHHSFAISVLFAAIVVTGTLLLSIAVGYLLFTVSVGSSAYLIAAIWPYALPPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
VAAILLNFILHPNLGVFTHYLEAVTPFTLDWFNSGPQAFTVVAVVAIWKQLGYNIIFVVA
HHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHCCCCHHHHHHHHHHHHHHHCCCEEEHHH
AFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGPGDATNLLIFKLYRDAFEFNSLGLASAESVILFALVAVLMYVQIRVSEGYAQYGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
STQPTPFDSTLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQQTAWVGAENFV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCHHHHH
QLLTSTAYHHSFAISVLFAAIVVTGTLLLSIAVGYLLFTVSVGSSAYLIAAIWPYALPPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
VAAILLNFILHPNLGVFTHYLEAVTPFTLDWFNSGPQAFTVVAVVAIWKQLGYNIIFVVA
HHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHCCCCHHHHHHHHHHHHHHHCCCEEEHHH
AFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGPGDATNLLIFKLYRDAFEFNSLGLASAESVILFALVAVLMYVQIRVSEGYAQYGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA