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Identifier: 16120118

GI number: 16120118

Start: 144372

End: 146375

Strand: Direct

Name: Not Available

Synonym: VNG6173C

Alternate gene names: NA

Gene position: 144372-146375 (Clockwise)

Preceding gene: 16120117

Following gene: 16120120

Centisome position: 39.51

GC content: 54.44

Gene sequence:

>2004_bases
ATGGAGACGAATGCCGTGTCGCTTATTTACCGCTGTCGAGTAGGGGAACGTATGAGCCAACATGACACGGACGGGCGTGT
TTCTGTATACGCCGAAAACATCGGCGGTATCTCGCAGTGCGACGTGACGTTCAAACCCGGAGTTAATGTCTTACGGGGGC
GAAACGCCACAGGCAGAACGTCACTCCTCAACGGTCTCGCTGGTGTGCTTGGAGGGACCGCCCCCGTACTCAAGGGGGAC
GAACAAGAGGCAGAGGTCCGGCTCGAGTTCAATGGGACCACGTACGACCAGCAGTATACACGCAAGAACGGGACAGTGCA
AGCCGCCGGTCAGCCTGTCACAGAGCGTCGTGATCTGGTCGATCTGTTCGTTTGTTTGACCGCGGAGAACCCTGCCCGTC
GGGCAATCGTTCAGGACGGAAACTTGCGAGACGTGATTATGCGGCCTGTCGACACTGGTTCAATCCAGCGCCGTATCGAG
GACCTCCAGAGCGAGCGAAACCGAATCGGACAGCGGATCAGAGCAATTGAAGACGATCTCGACCAACGCACGTCGCTCAC
GAGCCGAAAAACAACGTTGGTGAGTGACCTAGACGAGTGTGACCAAGAGATCGAGGAGTTACGGAACCAACTGGAACAGT
TTGATGCCGACCCGGAAGAAGCAGAGGAAATCGAACAGGCACTCACGTCGTTGGAAGAGCGAAAGCAAGAGCTTGAATCG
ATCACAAATCGAATCCGAACCCAAGAAGACACACGCGAAGCTTTGCGGGATGAGCAGAGCGAGCTCCAAACGGAACGAGA
GGCTATTGAAACCTCAGAGGAGGAACTGAAACGGATCGAAACGAGGCTGTCTGAACTCACTTCTCGCGAGCGCTCGCTTG
CAACGACAATTAATGACCTCTCTGCCATCGTCGATTTCAACGAAGATCTGGTTTCAAACGCTGATTCAGACCTTCTTCGT
TCCGGAGACGCAGCGGAGTCACCGGTCTCGAAACTCAACCCAATGTCGGAGACCGTCGAATGTTGGACATGTGGAACGGA
AGTCGAACGAAACCGAATTGCTGGTCGGCTGGACGACCTCCGCGATCTCGTTGACGAGAAACGGACCGAGCGGTCCGAGG
TGCAAACAGAGATTGAGGAACTGCGTGAATCACAGCAGGAGTTGCAGGAGGTAATCCACCGACGAGACGAAATCGGACAG
CGTCTTAGCGAGATTTCATCGGAGATTGCACAACGAGACCAGACTCTGGAATCACTGAGCGAAGAGCGCGAAGACGTCCA
CCAACGACTCTCTGAACTCGAAGAGTTTGTCTCGGAGCGAGAAGCTCTGCAGGAGAGCGAACTCACCGAGCAGTACCAGC
AGCTTAGTGAACTCGAATACCAGCGGGGGCAACTCGAGGAGGAGTTATCTGCTGTTCGAGAGGAGCTCGCGGAATTGGAC
CGGCTTGAAAACGAACGAGACCAACTCCAGGCACAGCAGGATGAGATTCAAGCAGAATTAGTGAGTCAACGAACCCAAAT
TCGGGACCTCGAGGAGAGCGCAATCACTGCATTCAATGACCATATGGAGGAGATTTTGGATGTGCTTCGCTACAAGAACA
TCGCCCGTGTCTGGATCGAACGGAAAGAGGGTGCAGAATTCAATTCGAGCCACGGAGGGTATCGAGGTGGATCTGCGACC
AAATTCGAGTTACATGTCGTTCGCGAGACTGATGAAGGGCGTGGATACGAGGATACCGTGCAGAGCCTCAGTGAGAGTGA
ACGGGAAGTAGTGGGACTAGTAGTAGCGTTAGCGGGATATCTCGTGCATGATGTCTACGAGGTCATTCCGATGATGTTGT
TGGATTCGCTGGAGGCAATCGACGCCGACCGGATCGCTGCGCTGGTTGATTACTTCGCTGATTATGCGCCTTATCTGATT
GTCGCTCTCCTTCCCGAGGATGCAGACGCCCTCGGTGGCGACGAAACTTCTGTTGTCCCCGCGAGTTTCGCCTCGGAGGA
GTGA

Upstream 100 bases:

>100_bases
ACGAGTGGGGTGTTCTGCCTGCGGACGGACCTACCGGATCGGAGAGTTCCTCGAACAGCGGGGGTGCGACTGTCAAACCG
ATGCGAAGTGAGCCAGCAGT

Downstream 100 bases:

>100_bases
GGGATTCGACGACCCAACTCGATTTACAACAGAATTGCTGTAAAACACTCTGGATGCTACTCCGTATCAGAATCACCGGT
CCGTTTTGCTTCAGGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: SMC-Like; Chromosome Segregation ATPase-Like Protein; Chromosome Segregation Protein; Kinetochore-Ndc80 Subunit Spc; Homolog 1 ; Homolog 2

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
METNAVSLIYRCRVGERMSQHDTDGRVSVYAENIGGISQCDVTFKPGVNVLRGRNATGRTSLLNGLAGVLGGTAPVLKGD
EQEAEVRLEFNGTTYDQQYTRKNGTVQAAGQPVTERRDLVDLFVCLTAENPARRAIVQDGNLRDVIMRPVDTGSIQRRIE
DLQSERNRIGQRIRAIEDDLDQRTSLTSRKTTLVSDLDECDQEIEELRNQLEQFDADPEEAEEIEQALTSLEERKQELES
ITNRIRTQEDTREALRDEQSELQTEREAIETSEEELKRIETRLSELTSRERSLATTINDLSAIVDFNEDLVSNADSDLLR
SGDAAESPVSKLNPMSETVECWTCGTEVERNRIAGRLDDLRDLVDEKRTERSEVQTEIEELRESQQELQEVIHRRDEIGQ
RLSEISSEIAQRDQTLESLSEEREDVHQRLSELEEFVSEREALQESELTEQYQQLSELEYQRGQLEEELSAVREELAELD
RLENERDQLQAQQDEIQAELVSQRTQIRDLEESAITAFNDHMEEILDVLRYKNIARVWIERKEGAEFNSSHGGYRGGSAT
KFELHVVRETDEGRGYEDTVQSLSESEREVVGLVVALAGYLVHDVYEVIPMMLLDSLEAIDADRIAALVDYFADYAPYLI
VALLPEDADALGGDETSVVPASFASEE

Sequences:

>Translated_667_residues
METNAVSLIYRCRVGERMSQHDTDGRVSVYAENIGGISQCDVTFKPGVNVLRGRNATGRTSLLNGLAGVLGGTAPVLKGD
EQEAEVRLEFNGTTYDQQYTRKNGTVQAAGQPVTERRDLVDLFVCLTAENPARRAIVQDGNLRDVIMRPVDTGSIQRRIE
DLQSERNRIGQRIRAIEDDLDQRTSLTSRKTTLVSDLDECDQEIEELRNQLEQFDADPEEAEEIEQALTSLEERKQELES
ITNRIRTQEDTREALRDEQSELQTEREAIETSEEELKRIETRLSELTSRERSLATTINDLSAIVDFNEDLVSNADSDLLR
SGDAAESPVSKLNPMSETVECWTCGTEVERNRIAGRLDDLRDLVDEKRTERSEVQTEIEELRESQQELQEVIHRRDEIGQ
RLSEISSEIAQRDQTLESLSEEREDVHQRLSELEEFVSEREALQESELTEQYQQLSELEYQRGQLEEELSAVREELAELD
RLENERDQLQAQQDEIQAELVSQRTQIRDLEESAITAFNDHMEEILDVLRYKNIARVWIERKEGAEFNSSHGGYRGGSAT
KFELHVVRETDEGRGYEDTVQSLSESEREVVGLVVALAGYLVHDVYEVIPMMLLDSLEAIDADRIAALVDYFADYAPYLI
VALLPEDADALGGDETSVVPASFASEE
>Mature_667_residues
METNAVSLIYRCRVGERMSQHDTDGRVSVYAENIGGISQCDVTFKPGVNVLRGRNATGRTSLLNGLAGVLGGTAPVLKGD
EQEAEVRLEFNGTTYDQQYTRKNGTVQAAGQPVTERRDLVDLFVCLTAENPARRAIVQDGNLRDVIMRPVDTGSIQRRIE
DLQSERNRIGQRIRAIEDDLDQRTSLTSRKTTLVSDLDECDQEIEELRNQLEQFDADPEEAEEIEQALTSLEERKQELES
ITNRIRTQEDTREALRDEQSELQTEREAIETSEEELKRIETRLSELTSRERSLATTINDLSAIVDFNEDLVSNADSDLLR
SGDAAESPVSKLNPMSETVECWTCGTEVERNRIAGRLDDLRDLVDEKRTERSEVQTEIEELRESQQELQEVIHRRDEIGQ
RLSEISSEIAQRDQTLESLSEEREDVHQRLSELEEFVSEREALQESELTEQYQQLSELEYQRGQLEEELSAVREELAELD
RLENERDQLQAQQDEIQAELVSQRTQIRDLEESAITAFNDHMEEILDVLRYKNIARVWIERKEGAEFNSSHGGYRGGSAT
KFELHVVRETDEGRGYEDTVQSLSESEREVVGLVVALAGYLVHDVYEVIPMMLLDSLEAIDADRIAALVDYFADYAPYLI
VALLPEDADALGGDETSVVPASFASEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75728; Mature: 75728

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNAVSLIYRCRVGERMSQHDTDGRVSVYAENIGGISQCDVTFKPGVNVLRGRNATGRT
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHCCCCCCCHH
SLLNGLAGVLGGTAPVLKGDEQEAEVRLEFNGTTYDQQYTRKNGTVQAAGQPVTERRDLV
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHH
DLFVCLTAENPARRAIVQDGNLRDVIMRPVDTGSIQRRIEDLQSERNRIGQRIRAIEDDL
HHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQRTSLTSRKTTLVSDLDECDQEIEELRNQLEQFDADPEEAEEIEQALTSLEERKQELES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ITNRIRTQEDTREALRDEQSELQTEREAIETSEEELKRIETRLSELTSRERSLATTINDL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIVDFNEDLVSNADSDLLRSGDAAESPVSKLNPMSETVECWTCGTEVERNRIAGRLDDL
HHHHCCCHHHHCCCCHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RDLVDEKRTERSEVQTEIEELRESQQELQEVIHRRDEIGQRLSEISSEIAQRDQTLESLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEREDVHQRLSELEEFVSEREALQESELTEQYQQLSELEYQRGQLEEELSAVREELAELD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLENERDQLQAQQDEIQAELVSQRTQIRDLEESAITAFNDHMEEILDVLRYKNIARVWIE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKEGAEFNSSHGGYRGGSATKFELHVVRETDEGRGYEDTVQSLSESEREVVGLVVALAGY
HHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVHDVYEVIPMMLLDSLEAIDADRIAALVDYFADYAPYLIVALLPEDADALGGDETSVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
ASFASEE
CCCCCCC
>Mature Secondary Structure
METNAVSLIYRCRVGERMSQHDTDGRVSVYAENIGGISQCDVTFKPGVNVLRGRNATGRT
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHCCCCCCCHH
SLLNGLAGVLGGTAPVLKGDEQEAEVRLEFNGTTYDQQYTRKNGTVQAAGQPVTERRDLV
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHH
DLFVCLTAENPARRAIVQDGNLRDVIMRPVDTGSIQRRIEDLQSERNRIGQRIRAIEDDL
HHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQRTSLTSRKTTLVSDLDECDQEIEELRNQLEQFDADPEEAEEIEQALTSLEERKQELES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ITNRIRTQEDTREALRDEQSELQTEREAIETSEEELKRIETRLSELTSRERSLATTINDL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIVDFNEDLVSNADSDLLRSGDAAESPVSKLNPMSETVECWTCGTEVERNRIAGRLDDL
HHHHCCCHHHHCCCCHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RDLVDEKRTERSEVQTEIEELRESQQELQEVIHRRDEIGQRLSEISSEIAQRDQTLESLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEREDVHQRLSELEEFVSEREALQESELTEQYQQLSELEYQRGQLEEELSAVREELAELD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLENERDQLQAQQDEIQAELVSQRTQIRDLEESAITAFNDHMEEILDVLRYKNIARVWIE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKEGAEFNSSHGGYRGGSATKFELHVVRETDEGRGYEDTVQSLSESEREVVGLVVALAGY
HHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVHDVYEVIPMMLLDSLEAIDADRIAALVDYFADYAPYLIVALLPEDADALGGDETSVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
ASFASEE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA