| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120106
GI number: 16120106
Start: 136124
End: 136285
Strand: Reverse
Name: Not Available
Synonym: VNG6158H
Alternate gene names: NA
Gene position: 136285-136124 (Counterclockwise)
Preceding gene: 16120107
Following gene: 16120105
Centisome position: 37.29
GC content: 54.94
Gene sequence:
>162_bases ATGGAGATCCGCAAGATGGTCGCGGATTCAGACCTCCTAGAGGGCGCATCGTTCGTCCCGAAAGCTCCGTCAGAGGAGAA ACTTCGTGAAGCCAAGCTCGAACGCATGGAAGAATCACTTGAGCCCATTGCGGACGATCAAGCCGAAGGGAGTAGTGAGT GA
Upstream 100 bases:
>100_bases GTGTGAACTTCGAGGCCGGAGTTTTTGACTTTCTTCTCATAGATCTCGAAAGTATGCCTCTACAGTTTTCGAGCAGCTGA TCGGGAAGCTCAACCGAGAT
Downstream 100 bases:
>100_bases AGACGATCTCCTGAACACTAATTACAGACAATTCTCTATCCCTGAGTTTCTTATTGAGAATGGGTTGGCCAATCCCAAAT CCGGGGGGCTTGCAGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MEIRKMVADSDLLEGASFVPKAPSEEKLREAKLERMEESLEPIADDQAEGSSE
Sequences:
>Translated_53_residues MEIRKMVADSDLLEGASFVPKAPSEEKLREAKLERMEESLEPIADDQAEGSSE >Mature_53_residues MEIRKMVADSDLLEGASFVPKAPSEEKLREAKLERMEESLEPIADDQAEGSSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5894; Mature: 5894
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRKMVADSDLLEGASFVPKAPSEEKLREAKLERMEESLEPIADDQAEGSSE CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEIRKMVADSDLLEGASFVPKAPSEEKLREAKLERMEESLEPIADDQAEGSSE CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA