Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120105

GI number: 16120105

Start: 135571

End: 135987

Strand: Reverse

Name: Not Available

Synonym: VNG6157H

Alternate gene names: NA

Gene position: 135987-135571 (Counterclockwise)

Preceding gene: 16120106

Following gene: 16120099

Centisome position: 37.21

GC content: 46.76

Gene sequence:

>417_bases
ATGAACGGTAGGGGAAATAATATGCGTCAGTGGTTTGGGGATGACATGCCCAGACGGGTATTGCTGCGTTCAATAGGCGT
GTGTTCCGCTGTTGGTATTGCGGGATGCCTTTCTCAGGGTGAGGCGAGGTCAATTACCGTTTACAATTATCGAGATGAAA
TGGTCACAGTTGATATGCGTGTTGTTGATGTCGGGTCTGGCGACGTAGCTATTGATACTGAATTTTCTATTGATCCAGAT
GGGAAGAAAGTGTTTGGCGATATCTTTGAACGGGATGGTGAGAAAAAAATTACTGTGAGCGTCCCGGGGGTAGGGTCAGA
AGAGAAGACATGGAGTGCGTCATCCGACCCAAAGACTAGCGGTCAGCTTGGAATTTCGATTAGAGAGAATGTTGAAATCA
GAGAAGGTTCTGGTTGA

Upstream 100 bases:

>100_bases
TATCCCTGAGTTTCTTATTGAGAATGGGTTGGCCAATCCCAAATCCGGGGGGCTTGCAGTCGTGATCTCTATTCCTTATA
AAACCAACAAAGTATTTAGG

Downstream 100 bases:

>100_bases
AATAATTTCTATTATCTGCACACTATGGCAATCGTATATTGATTTTAACTACCTCGTAAATATCGTATTGAGTCCGGTGA
AATTGAGCTGACTCGGTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNGRGNNMRQWFGDDMPRRVLLRSIGVCSAVGIAGCLSQGEARSITVYNYRDEMVTVDMRVVDVGSGDVAIDTEFSIDPD
GKKVFGDIFERDGEKKITVSVPGVGSEEKTWSASSDPKTSGQLGISIRENVEIREGSG

Sequences:

>Translated_138_residues
MNGRGNNMRQWFGDDMPRRVLLRSIGVCSAVGIAGCLSQGEARSITVYNYRDEMVTVDMRVVDVGSGDVAIDTEFSIDPD
GKKVFGDIFERDGEKKITVSVPGVGSEEKTWSASSDPKTSGQLGISIRENVEIREGSG
>Mature_138_residues
MNGRGNNMRQWFGDDMPRRVLLRSIGVCSAVGIAGCLSQGEARSITVYNYRDEMVTVDMRVVDVGSGDVAIDTEFSIDPD
GKKVFGDIFERDGEKKITVSVPGVGSEEKTWSASSDPKTSGQLGISIRENVEIREGSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14950; Mature: 14950

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRGNNMRQWFGDDMPRRVLLRSIGVCSAVGIAGCLSQGEARSITVYNYRDEMVTVDMR
CCCCCCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEE
VVDVGSGDVAIDTEFSIDPDGKKVFGDIFERDGEKKITVSVPGVGSEEKTWSASSDPKTS
EEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
GQLGISIRENVEIREGSG
CEEEEEEECCEEEECCCC
>Mature Secondary Structure
MNGRGNNMRQWFGDDMPRRVLLRSIGVCSAVGIAGCLSQGEARSITVYNYRDEMVTVDMR
CCCCCCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEE
VVDVGSGDVAIDTEFSIDPDGKKVFGDIFERDGEKKITVSVPGVGSEEKTWSASSDPKTS
EEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
GQLGISIRENVEIREGSG
CEEEEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA