Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120079

GI number: 16120079

Start: 92639

End: 93613

Strand: Direct

Name: Not Available

Synonym: VNG6127H

Alternate gene names: NA

Gene position: 92639-93613 (Clockwise)

Preceding gene: 16120078

Following gene: 16120080

Centisome position: 25.35

GC content: 58.87

Gene sequence:

>975_bases
ATGCCCTTCAGCGTCACCTGGAATACGCTCTTGGAGAGACTCGATGCCCTTCACGAGGAGGCAACGCTCATCACCCCACT
CTCCAACAATCGCATTCGCATCACCGACGTCCAAGACCAACGCGTCATCATCCAGTTCCGTGACCGTGACATTGACCAGA
CGCGTCCACTCCAGCGCGACCAGTTTGAAACGCTCTACCGGCGCATCACCGAGGAGTCAGGCGAGTTCAATCTTGATCGA
CTACCACCTGACGCTGACCCATATCCCGCCGTCTTGACCATCCACCCGCAGTTTGAACTCGATGCAGACGCTGGAGTTAT
CACTCAAACTGAGGGAGAAACGTCAACGCAACTGCGTGACAGTGATCCAGCCACCGACGTCGACGACCGCACTGAGCCAG
ACCTAGACGTGTATGCGGACGCGCTCTTGGTTGTTGATGCGCTCGAACGCCACGAGGTGGCCGACCTCTCCGAGCTGGAG
ACGGACGCGCTGGGTACCCTCTATACGCTCCTCTCAGATCTTCAGCGGGATGCCAACGACCTTCGGAAGGATGTTGCCGA
CGTGTTGTTGAGCCGGCTGCACCACGACCGGCCAGTGAGCGCGCCGTTCGGCTCCGTTCAGCGGACCACGCGCCAGACCC
GGTCGCTCAAAGACGACGAGACGGTGCTGGCAGCATTCGAAGACGCGGGGATCGACCGAGATCGCGTGCTTGGCGTCGAC
CGAAACAAAGTCGACGACGCGCTGGAGGTAACCGACCTCTCCGAATCGGACGTATACGACATTGAGGAAAGTGAGTATGT
GCGGAAAGCCGAGGTTGACGAGGAACGCAAGGAGACGCGTCTCCAAGGGCTCAAGGATCAACTTGCCGCCACCGAGGGCG
ACGAAACGGATGCCCTCCAAGAGGAAATCAGCGCACTCGAAGACCGCATCGATTCTCTCACCAGCTTCCAAACTGGAACT
GACCTCCAAGAATGA

Upstream 100 bases:

>100_bases
ACTGTTCTATGACACCCTGAGGGGGTGTAATACTGCCGTCGTTACGTCTGTAGCACGTCCCCAGACCAACCTTTAGGGCC
GTATCGGACAATCGCTACGT

Downstream 100 bases:

>100_bases
CCACCTACCAGTTCCGAGTCAAATTCGAATACGCTCCGACTGAACTGTGGCGTGACATCATCGTCGGGGCCGACCGCACC
CTCGACGAGTTCCAAACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MPFSVTWNTLLERLDALHEEATLITPLSNNRIRITDVQDQRVIIQFRDRDIDQTRPLQRDQFETLYRRITEESGEFNLDR
LPPDADPYPAVLTIHPQFELDADAGVITQTEGETSTQLRDSDPATDVDDRTEPDLDVYADALLVVDALERHEVADLSELE
TDALGTLYTLLSDLQRDANDLRKDVADVLLSRLHHDRPVSAPFGSVQRTTRQTRSLKDDETVLAAFEDAGIDRDRVLGVD
RNKVDDALEVTDLSESDVYDIEESEYVRKAEVDEERKETRLQGLKDQLAATEGDETDALQEEISALEDRIDSLTSFQTGT
DLQE

Sequences:

>Translated_324_residues
MPFSVTWNTLLERLDALHEEATLITPLSNNRIRITDVQDQRVIIQFRDRDIDQTRPLQRDQFETLYRRITEESGEFNLDR
LPPDADPYPAVLTIHPQFELDADAGVITQTEGETSTQLRDSDPATDVDDRTEPDLDVYADALLVVDALERHEVADLSELE
TDALGTLYTLLSDLQRDANDLRKDVADVLLSRLHHDRPVSAPFGSVQRTTRQTRSLKDDETVLAAFEDAGIDRDRVLGVD
RNKVDDALEVTDLSESDVYDIEESEYVRKAEVDEERKETRLQGLKDQLAATEGDETDALQEEISALEDRIDSLTSFQTGT
DLQE
>Mature_323_residues
PFSVTWNTLLERLDALHEEATLITPLSNNRIRITDVQDQRVIIQFRDRDIDQTRPLQRDQFETLYRRITEESGEFNLDRL
PPDADPYPAVLTIHPQFELDADAGVITQTEGETSTQLRDSDPATDVDDRTEPDLDVYADALLVVDALERHEVADLSELET
DALGTLYTLLSDLQRDANDLRKDVADVLLSRLHHDRPVSAPFGSVQRTTRQTRSLKDDETVLAAFEDAGIDRDRVLGVDR
NKVDDALEVTDLSESDVYDIEESEYVRKAEVDEERKETRLQGLKDQLAATEGDETDALQEEISALEDRIDSLTSFQTGTD
LQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36756; Mature: 36625

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSVTWNTLLERLDALHEEATLITPLSNNRIRITDVQDQRVIIQFRDRDIDQTRPLQRD
CCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCHH
QFETLYRRITEESGEFNLDRLPPDADPYPAVLTIHPQFELDADAGVITQTEGETSTQLRD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEECCCCCCCCCCC
SDPATDVDDRTEPDLDVYADALLVVDALERHEVADLSELETDALGTLYTLLSDLQRDAND
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKDVADVLLSRLHHDRPVSAPFGSVQRTTRQTRSLKDDETVLAAFEDAGIDRDRVLGVD
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEECCC
RNKVDDALEVTDLSESDVYDIEESEYVRKAEVDEERKETRLQGLKDQLAATEGDETDALQ
CHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EEISALEDRIDSLTSFQTGTDLQE
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PFSVTWNTLLERLDALHEEATLITPLSNNRIRITDVQDQRVIIQFRDRDIDQTRPLQRD
CCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCHH
QFETLYRRITEESGEFNLDRLPPDADPYPAVLTIHPQFELDADAGVITQTEGETSTQLRD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEECCCCCCCCCCC
SDPATDVDDRTEPDLDVYADALLVVDALERHEVADLSELETDALGTLYTLLSDLQRDAND
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKDVADVLLSRLHHDRPVSAPFGSVQRTTRQTRSLKDDETVLAAFEDAGIDRDRVLGVD
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEECCC
RNKVDDALEVTDLSESDVYDIEESEYVRKAEVDEERKETRLQGLKDQLAATEGDETDALQ
CHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EEISALEDRIDSLTSFQTGTDLQE
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA