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Identifier: 16120053

GI number: 16120053

Start: 68245

End: 68682

Strand: Reverse

Name: Not Available

Synonym: VNG6090C

Alternate gene names: NA

Gene position: 68682-68245 (Counterclockwise)

Preceding gene: 16120057

Following gene: 16120052

Centisome position: 18.8

GC content: 55.94

Gene sequence:

>438_bases
ATGGTTGAGGTTCCAGAGTCGCTCCAGAGTCTGTTTAGCGCAACTGTAGAAAAACGAGGCGAGACATATACACTCGAAGT
TCCGCAAACTGAGGTTGATCACGGCGCTATCTCTCCTGGTGAAACATACCGGATCGGCGTACTCACGCAACGACAATCCT
CGACGAAGACAGCTGACGAACGCACAGCACAGGAGCAGCCCGCTCCGTCCGAACGGAATTCTGGACCACCTACCCCACCG
GTCACTGAAGGGGAAGTCCGTGACGTGACGATCGAGACAGTCGGCGATCAAGGCGATGGAATCGCGAAGGTCGAACGCGG
CTATGTCGTTATCATTCCAGGTGCGCAGCCCGGTGACGAGCCGACCATCGAAATCGACCAGGTCCAAGAGAACGTCGCAT
TTGCCAGCGTTGTCGATACCGGCCCTCAATCACTCTAA

Upstream 100 bases:

>100_bases
CATAGTTTTCCTGAAATTCCAGGAAACACGAGCCTTCCTGAATAGATACCTCTCTTCGCGGAAGATAACCGATTAACTAC
CAGGGGCTGTAGGTCAGCGT

Downstream 100 bases:

>100_bases
CTAGGCTCATAATCCGGTGTCTGTCCGGCAAGGAGGAGGAGGCGCAACGTTGATGCCTGCCGGGCTTCATATTCTATGTA
CGAAACGCAGGTATGAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MVEVPESLQSLFSATVEKRGETYTLEVPQTEVDHGAISPGETYRIGVLTQRQSSTKTADERTAQEQPAPSERNSGPPTPP
VTEGEVRDVTIETVGDQGDGIAKVERGYVVIIPGAQPGDEPTIEIDQVQENVAFASVVDTGPQSL

Sequences:

>Translated_145_residues
MVEVPESLQSLFSATVEKRGETYTLEVPQTEVDHGAISPGETYRIGVLTQRQSSTKTADERTAQEQPAPSERNSGPPTPP
VTEGEVRDVTIETVGDQGDGIAKVERGYVVIIPGAQPGDEPTIEIDQVQENVAFASVVDTGPQSL
>Mature_145_residues
MVEVPESLQSLFSATVEKRGETYTLEVPQTEVDHGAISPGETYRIGVLTQRQSSTKTADERTAQEQPAPSERNSGPPTPP
VTEGEVRDVTIETVGDQGDGIAKVERGYVVIIPGAQPGDEPTIEIDQVQENVAFASVVDTGPQSL

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15489; Mature: 15489

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEVPESLQSLFSATVEKRGETYTLEVPQTEVDHGAISPGETYRIGVLTQRQSSTKTADE
CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
RTAQEQPAPSERNSGPPTPPVTEGEVRDVTIETVGDQGDGIAKVERGYVVIIPGAQPGDE
HHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEEECCCCCCCC
PTIEIDQVQENVAFASVVDTGPQSL
CCEEHHHHHCHHHEEEEECCCCCCC
>Mature Secondary Structure
MVEVPESLQSLFSATVEKRGETYTLEVPQTEVDHGAISPGETYRIGVLTQRQSSTKTADE
CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
RTAQEQPAPSERNSGPPTPPVTEGEVRDVTIETVGDQGDGIAKVERGYVVIIPGAQPGDE
HHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEEECCCCCCCC
PTIEIDQVQENVAFASVVDTGPQSL
CCEEHHHHHCHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA