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Identifier: 16120052

GI number: 16120052

Start: 67322

End: 68152

Strand: Reverse

Name: Not Available

Synonym: VNG6088C

Alternate gene names: NA

Gene position: 68152-67322 (Counterclockwise)

Preceding gene: 16120053

Following gene: 16120051

Centisome position: 18.65

GC content: 63.9

Gene sequence:

>831_bases
ATGAGTTCCACACAAGAGACACAAACTATACGGCAGGGCCTTTCGACCCGTGAGAGCCGACTCCTCTCGCATCTCGCCGC
GGAGGGCCACCAAATAATCTCGATCGACGACGTCGAGGCGACCCTCGAGGTCGCGCCGAACACCGCCCGCGAGATCGCCT
CCCGCCTCACCGAGAAAGGGTGGCTGGACCGGCTGCTCCCCGGCCGATATCTCATCATCCCCCTCGCTGCTGGCGAGGAG
GCCGTGTACACGACCCACGAGTATCTCATCGCCTCGCACGTCGCTGAGCCGATGTACATCGGCTACTACAGCGCCCTCAG
CCATCACGGGCTGACCGAACAGGTTCCCCGAACCGTGTACGTCGTCACCCCGACGCGAGCCCAGAGTCGCGAGATTCACG
GCGTCCCCTATCGCGTCGCGACGGTCACCGAGCGGAAGTTCTTCGGCTACGAGCCGACGTCCATCGAGGGAACTGTCGTG
AACGTCGCCGACCTGGCGAAGACGCTTGTCGACTGTGCCGACCATCCCGAGTACTGCGGTGGCATCCGCGAACTCGCAAC
GGCGATGGTCGCGGCGGACGACCAAGCCTGTTCGTGGGCGACGGTCGGCGAGTATCTCCAGCGGCTTGACAACGGCGCGG
CGACCAAGCGAATCGTCTACTTGGCCGACCAGCTGAGTATCGACCTCCCAACGCGTGAGACGCTCGTCGAGTCGTTCACG
AGCGGGTACTCGCTGCTCGACCCAACGCAGAGCGAGCAGGGATCATACGACAGTGAGTATCGCCTCCGAATTAACGTCGA
CCCGGGCACGCTCGGTCCGACGGAGTCCTGA

Upstream 100 bases:

>100_bases
CACTCTAACTAGGCTCATAATCCGGTGTCTGTCCGGCAAGGAGGAGGAGGCGCAACGTTGATGCCTGCCGGGCTTCATAT
TCTATGTACGAAACGCAGGT

Downstream 100 bases:

>100_bases
TTCTAATGATCAGTCAAAACCGACTCCGTGTCCTTGCCCGTGAGCTAGGTGTCCGCCAGGGCTATGCTGAGAAGAACTAC
GTCAACTCCTGGATTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator-Like Protein

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSSTQETQTIRQGLSTRESRLLSHLAAEGHQIISIDDVEATLEVAPNTAREIASRLTEKGWLDRLLPGRYLIIPLAAGEE
AVYTTHEYLIASHVAEPMYIGYYSALSHHGLTEQVPRTVYVVTPTRAQSREIHGVPYRVATVTERKFFGYEPTSIEGTVV
NVADLAKTLVDCADHPEYCGGIRELATAMVAADDQACSWATVGEYLQRLDNGAATKRIVYLADQLSIDLPTRETLVESFT
SGYSLLDPTQSEQGSYDSEYRLRINVDPGTLGPTES

Sequences:

>Translated_276_residues
MSSTQETQTIRQGLSTRESRLLSHLAAEGHQIISIDDVEATLEVAPNTAREIASRLTEKGWLDRLLPGRYLIIPLAAGEE
AVYTTHEYLIASHVAEPMYIGYYSALSHHGLTEQVPRTVYVVTPTRAQSREIHGVPYRVATVTERKFFGYEPTSIEGTVV
NVADLAKTLVDCADHPEYCGGIRELATAMVAADDQACSWATVGEYLQRLDNGAATKRIVYLADQLSIDLPTRETLVESFT
SGYSLLDPTQSEQGSYDSEYRLRINVDPGTLGPTES
>Mature_275_residues
SSTQETQTIRQGLSTRESRLLSHLAAEGHQIISIDDVEATLEVAPNTAREIASRLTEKGWLDRLLPGRYLIIPLAAGEEA
VYTTHEYLIASHVAEPMYIGYYSALSHHGLTEQVPRTVYVVTPTRAQSREIHGVPYRVATVTERKFFGYEPTSIEGTVVN
VADLAKTLVDCADHPEYCGGIRELATAMVAADDQACSWATVGEYLQRLDNGAATKRIVYLADQLSIDLPTRETLVESFTS
GYSLLDPTQSEQGSYDSEYRLRINVDPGTLGPTES

Specific function: Unknown

COG id: COG5340

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30411; Mature: 30280

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTQETQTIRQGLSTRESRLLSHLAAEGHQIISIDDVEATLEVAPNTAREIASRLTEKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHH
WLDRLLPGRYLIIPLAAGEEAVYTTHEYLIASHVAEPMYIGYYSALSHHGLTEQVPRTVY
HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCEEE
VVTPTRAQSREIHGVPYRVATVTERKFFGYEPTSIEGTVVNVADLAKTLVDCADHPEYCG
EEECCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHH
GIRELATAMVAADDQACSWATVGEYLQRLDNGAATKRIVYLADQLSIDLPTRETLVESFT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEEHHHEECCCHHHHHHHHHH
SGYSLLDPTQSEQGSYDSEYRLRINVDPGTLGPTES
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SSTQETQTIRQGLSTRESRLLSHLAAEGHQIISIDDVEATLEVAPNTAREIASRLTEKG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHH
WLDRLLPGRYLIIPLAAGEEAVYTTHEYLIASHVAEPMYIGYYSALSHHGLTEQVPRTVY
HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCEEE
VVTPTRAQSREIHGVPYRVATVTERKFFGYEPTSIEGTVVNVADLAKTLVDCADHPEYCG
EEECCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHH
GIRELATAMVAADDQACSWATVGEYLQRLDNGAATKRIVYLADQLSIDLPTRETLVESFT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEEHHHEECCCHHHHHHHHHH
SGYSLLDPTQSEQGSYDSEYRLRINVDPGTLGPTES
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA