Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is virH2 [H]

Identifier: 16119968

GI number: 16119968

Start: 169219

End: 170394

Strand: Direct

Name: virH2 [H]

Synonym: Atu6151

Alternate gene names: 16119968

Gene position: 169219-170394 (Clockwise)

Preceding gene: 16119967

Following gene: 159161990

Centisome position: 78.99

GC content: 57.99

Gene sequence:

>1176_bases
ATGCAATTGGCACCAGTGGATCGCGTAACCACAATCGACGACCTTACACTTGATCCCTATCCGATTTATCGCCGAATGCG
CGCGCAGACCCCGGTGGTGCGGGTCGCCTCAGTGATGCGAACGTTTCTGACCAAGGCCTCCGATACGAAGATGGTGAAGG
ATCAGCCCAGGCGCTTCAGTTCGGATGACCCCAACACGCCAATGAAGCCGGCCTTCCAGGCCCATACTCTAATGCGCAAG
GACGGCGCGGAACACGCCCGCGAAAGAATGGCCATGGCTAAGGCCTTTGCTCCCAAAACGACCGCGGAGCATTGGGCGGC
GATCTATCGGGACATTGTAAACGAGTATCTTGATCGCCTTTCCCGCGGCAGCACAGTAGATCTGTTCGCGGAGATCTGCG
GCCCGGTGGCTGCCCGTATCCTGGCTCATATCCTTGGAATTAGCGAAGCATCCGACGCAGAAATGATACGTTGGTCGCAG
CGGCTAATTGAAGGGGCGGGCAACTTCGGATGGCGGCCTGAGCCTTTCGAGCGGGCAAACGAAGCCAATGCGGAGATGAA
CCGGCTCTTCGACAACTTGGTCGAAAAGCACCGGGCGGAACCGAACCCCTCGGCTTTCGCGATCATGGTGACCGCGTCTG
ATCCCATACCCATGAGCCAGATTTACGCCAACATCAAAATCGCCGTCGGCGGAGGCATCAACGAGCCTCGCGACGCTCTT
GGCACGATCATCTATGGATTGCTGACCAATCCGGAGCAGTTCGAGGAGGTTAAGAGGCAGCAGTGCTGGGGGCAAGTCTT
CGAGGAGGGCGTGCGCTGGGTTGCTCCGATCCAGGCGAGTTCGCGCCTCGTCCTGGAGGACACGGAAATTCGCGGTTTTC
TTGTCCCGAAGGGCGATACCGTGATGACCATCCAAGCCTCTGCCAATCGTGATGAAGATGTCTTTGACGACGGAGAGCGC
TTCAATGTCTTCCGCCAGAATAATGCGCACCAGTCCTTCGGCTCGGGGCCGCATCACTGTGCCGGTGCGCAAATCTCGCG
TCAAACCGTCGGGGCGATCATGTTGCCTACGCTGTTTGAACGTTTTCCGAACATGACGCTGACTAACCCGGACGCGGTGC
AATGGCGCGGCTTCGGCTTCCGCGGACCGATTAGTCTACCGGTTACGCTTATATAA

Upstream 100 bases:

>100_bases
GTCAATCTGGGCGTCGATCGGTGAGGTCACCGTTCCGTTCGGTTGACGGAGATGAGGTTGAGTATCACAGCCAGGATTAA
ATGAACCGGGAGAACTCCCA

Downstream 100 bases:

>100_bases
TCGTAACCACTGTCGCTTGGCATTAAGCCGTAGAAAGGGATCAGAACAAGATTAGTGCGAAATCGTACGTTTGGCCGGGA
AAGTGATGATCGAGATGGAT

Product: P-450 monoxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFSSDDPNTPMKPAFQAHTLMRK
DGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRLSRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQ
RLIEGAGNFGWRPEPFERANEANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL
GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDTVMTIQASANRDEDVFDDGER
FNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFERFPNMTLTNPDAVQWRGFGFRGPISLPVTLI

Sequences:

>Translated_391_residues
MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFSSDDPNTPMKPAFQAHTLMRK
DGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRLSRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQ
RLIEGAGNFGWRPEPFERANEANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL
GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDTVMTIQASANRDEDVFDDGER
FNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFERFPNMTLTNPDAVQWRGFGFRGPISLPVTLI
>Mature_391_residues
MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFSSDDPNTPMKPAFQAHTLMRK
DGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRLSRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQ
RLIEGAGNFGWRPEPFERANEANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL
GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDTVMTIQASANRDEDVFDDGER
FNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFERFPNMTLTNPDAVQWRGFGFRGPISLPVTLI

Specific function: Not essential for virulence, but may be involved in the detoxification of plant protective agents at the site of wounding [H]

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397
- InterPro:   IPR017972 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 43801; Mature: 43801

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
SDDPNTPMKPAFQAHTLMRKDGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRL
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQRLIEGAGNFGWRPEPFERAN
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
EANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHEEEEEEECCCCCCHHHHH
GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEECCCCE
VMTIQASANRDEDVFDDGERFNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFE
EEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RFPNMTLTNPDAVQWRGFGFRGPISLPVTLI
HCCCCEECCCCCCEECCCCCCCCCCCCEEEC
>Mature Secondary Structure
MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
SDDPNTPMKPAFQAHTLMRKDGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRL
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQRLIEGAGNFGWRPEPFERAN
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
EANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHEEEEEEECCCCCCHHHHH
GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEECCCCE
VMTIQASANRDEDVFDDGERFNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFE
EEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RFPNMTLTNPDAVQWRGFGFRGPISLPVTLI
HCCCCEECCCCCCEECCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2708311 [H]