| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is virH2 [H]
Identifier: 16119968
GI number: 16119968
Start: 169219
End: 170394
Strand: Direct
Name: virH2 [H]
Synonym: Atu6151
Alternate gene names: 16119968
Gene position: 169219-170394 (Clockwise)
Preceding gene: 16119967
Following gene: 159161990
Centisome position: 78.99
GC content: 57.99
Gene sequence:
>1176_bases ATGCAATTGGCACCAGTGGATCGCGTAACCACAATCGACGACCTTACACTTGATCCCTATCCGATTTATCGCCGAATGCG CGCGCAGACCCCGGTGGTGCGGGTCGCCTCAGTGATGCGAACGTTTCTGACCAAGGCCTCCGATACGAAGATGGTGAAGG ATCAGCCCAGGCGCTTCAGTTCGGATGACCCCAACACGCCAATGAAGCCGGCCTTCCAGGCCCATACTCTAATGCGCAAG GACGGCGCGGAACACGCCCGCGAAAGAATGGCCATGGCTAAGGCCTTTGCTCCCAAAACGACCGCGGAGCATTGGGCGGC GATCTATCGGGACATTGTAAACGAGTATCTTGATCGCCTTTCCCGCGGCAGCACAGTAGATCTGTTCGCGGAGATCTGCG GCCCGGTGGCTGCCCGTATCCTGGCTCATATCCTTGGAATTAGCGAAGCATCCGACGCAGAAATGATACGTTGGTCGCAG CGGCTAATTGAAGGGGCGGGCAACTTCGGATGGCGGCCTGAGCCTTTCGAGCGGGCAAACGAAGCCAATGCGGAGATGAA CCGGCTCTTCGACAACTTGGTCGAAAAGCACCGGGCGGAACCGAACCCCTCGGCTTTCGCGATCATGGTGACCGCGTCTG ATCCCATACCCATGAGCCAGATTTACGCCAACATCAAAATCGCCGTCGGCGGAGGCATCAACGAGCCTCGCGACGCTCTT GGCACGATCATCTATGGATTGCTGACCAATCCGGAGCAGTTCGAGGAGGTTAAGAGGCAGCAGTGCTGGGGGCAAGTCTT CGAGGAGGGCGTGCGCTGGGTTGCTCCGATCCAGGCGAGTTCGCGCCTCGTCCTGGAGGACACGGAAATTCGCGGTTTTC TTGTCCCGAAGGGCGATACCGTGATGACCATCCAAGCCTCTGCCAATCGTGATGAAGATGTCTTTGACGACGGAGAGCGC TTCAATGTCTTCCGCCAGAATAATGCGCACCAGTCCTTCGGCTCGGGGCCGCATCACTGTGCCGGTGCGCAAATCTCGCG TCAAACCGTCGGGGCGATCATGTTGCCTACGCTGTTTGAACGTTTTCCGAACATGACGCTGACTAACCCGGACGCGGTGC AATGGCGCGGCTTCGGCTTCCGCGGACCGATTAGTCTACCGGTTACGCTTATATAA
Upstream 100 bases:
>100_bases GTCAATCTGGGCGTCGATCGGTGAGGTCACCGTTCCGTTCGGTTGACGGAGATGAGGTTGAGTATCACAGCCAGGATTAA ATGAACCGGGAGAACTCCCA
Downstream 100 bases:
>100_bases TCGTAACCACTGTCGCTTGGCATTAAGCCGTAGAAAGGGATCAGAACAAGATTAGTGCGAAATCGTACGTTTGGCCGGGA AAGTGATGATCGAGATGGAT
Product: P-450 monoxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFSSDDPNTPMKPAFQAHTLMRK DGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRLSRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQ RLIEGAGNFGWRPEPFERANEANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDTVMTIQASANRDEDVFDDGER FNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFERFPNMTLTNPDAVQWRGFGFRGPISLPVTLI
Sequences:
>Translated_391_residues MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFSSDDPNTPMKPAFQAHTLMRK DGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRLSRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQ RLIEGAGNFGWRPEPFERANEANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDTVMTIQASANRDEDVFDDGER FNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFERFPNMTLTNPDAVQWRGFGFRGPISLPVTLI >Mature_391_residues MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFSSDDPNTPMKPAFQAHTLMRK DGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRLSRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQ RLIEGAGNFGWRPEPFERANEANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDTVMTIQASANRDEDVFDDGER FNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFERFPNMTLTNPDAVQWRGFGFRGPISLPVTLI
Specific function: Not essential for virulence, but may be involved in the detoxification of plant protective agents at the site of wounding [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43801; Mature: 43801
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFS CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC SDDPNTPMKPAFQAHTLMRKDGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRL CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQRLIEGAGNFGWRPEPFERAN HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH EANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHEEEEEEECCCCCCHHHHH GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEECCCCE VMTIQASANRDEDVFDDGERFNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFE EEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RFPNMTLTNPDAVQWRGFGFRGPISLPVTLI HCCCCEECCCCCCEECCCCCCCCCCCCEEEC >Mature Secondary Structure MQLAPVDRVTTIDDLTLDPYPIYRRMRAQTPVVRVASVMRTFLTKASDTKMVKDQPRRFS CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC SDDPNTPMKPAFQAHTLMRKDGAEHARERMAMAKAFAPKTTAEHWAAIYRDIVNEYLDRL CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SRGSTVDLFAEICGPVAARILAHILGISEASDAEMIRWSQRLIEGAGNFGWRPEPFERAN HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH EANAEMNRLFDNLVEKHRAEPNPSAFAIMVTASDPIPMSQIYANIKIAVGGGINEPRDAL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHEEEEEEECCCCCCHHHHH GTIIYGLLTNPEQFEEVKRQQCWGQVFEEGVRWVAPIQASSRLVLEDTEIRGFLVPKGDT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEECCCCE VMTIQASANRDEDVFDDGERFNVFRQNNAHQSFGSGPHHCAGAQISRQTVGAIMLPTLFE EEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RFPNMTLTNPDAVQWRGFGFRGPISLPVTLI HCCCCEECCCCCCEECCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2708311 [H]