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The map label for this gene is tnp

Identifier: 159161990

GI number: 159161990

Start: 170670

End: 171593

Strand: Direct

Name: tnp

Synonym: Atu6152

Alternate gene names: NA

Gene position: 170670-171593 (Clockwise)

Preceding gene: 16119968

Following gene: 16119971

Centisome position: 79.67

GC content: 54.44

Gene sequence:

>924_bases
ATGGAGAAAATAGTTTATGTAGGCCTCGACGTTCATGCTGACACGATAGCTGTCGCCATTGCTGACGACGGTCGGAATCG
AGAGATCCGATTTCACGGTGTGATTGAAAATACTGCAGATAGTGTTCTAGGTCTCACCAAGCGGCTTGTTGCCGCAAACA
CCCAACCCATCTTCTGCTATGAAGCAGGCCCATGCGGATACGGTCTGCATCGCTTGCTCACGAAGCTTGGATTTGATTGT
GCTGTCGTCTCTCCGGCCATGATCCCTCGTCGTGCAGGCGACCGGATCAAAACCGATCGACGCGATGCGGAAATGCTGGC
GCGGCTGTGGCGAGCAGGCGAATTGACCCCGGTCTGGACACCGGATGAAGAACAGGAAGCTATGCGGGATCTGATCCGAA
CCCGCAAACAGTCCCTGGATGCGCTGAAGATTGCAAAACAGCAGCTCCAGAGCTTTCTGCTGCGGCATGGCCTTCGCTAC
AATCGACCTACTTACTGGACCAAAATCCATTGGCGCTGGGTCAATGAGCTGCGCAAATTCCGCTTTCCACATCAGCAACT
GGCTTTTGAGGAACTGAAGCGAACCATCCGCCAGATCGAAGAGTGCATCGCCACGTTGGATCAGGCCATTAAAGATGCTG
TAAAGGATTGGCGTTTTGGTGCACTGGTCGATGCCCTGCGATCATTGCACGGCGTCAACACGATCATCGCTGCGACACTG
GCCGCAGAGATCGGCGACATCAACCGCTTCGACAATCCACGCCAGCTCATGGCCTGGTTGGGGCTGGTGCCAAGTGAGCA
TTCCAGCGGCAGCACAGTCAGACGGGGGCGCATTACAAAGACAGGTAATGCCCTGGCCCGAACCATGATGGTTGAAGCTA
GTTGTCGTATCGACACCCACCTCGAGAAAGACATCCTTTTTTGA

Upstream 100 bases:

>100_bases
GAAATATGCACGAATTCGGTTAGACCAGATGAGCGATTTTTGGCGGTAAAGCCGCTAGGTTTTCCTTGCTGAGCCAATAT
TGGTTTCGAAGGGAAAAGCC

Downstream 100 bases:

>100_bases
AGCGCAGTCAGCATCAGCCTCAAGAGATTAAAGATATTGGCTGGAAAGCGCAGACGCGATTGTGCAAGCGGTACCGGGAC
CTTTCAAAAACCGGGAAACC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEKIVYVGLDVHADTIAVAIADDGRNREIRFHGVIENTADSVLGLTKRLVAANTQPIFCYEAGPCGYGLHRLLTKLGFDC
AVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWTPDEEQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRY
NRPTYWTKIHWRWVNELRKFRFPHQQLAFEELKRTIRQIEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIAATL
AAEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEASCRIDTHLEKDILF

Sequences:

>Translated_307_residues
MEKIVYVGLDVHADTIAVAIADDGRNREIRFHGVIENTADSVLGLTKRLVAANTQPIFCYEAGPCGYGLHRLLTKLGFDC
AVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWTPDEEQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRY
NRPTYWTKIHWRWVNELRKFRFPHQQLAFEELKRTIRQIEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIAATL
AAEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEASCRIDTHLEKDILF
>Mature_307_residues
MEKIVYVGLDVHADTIAVAIADDGRNREIRFHGVIENTADSVLGLTKRLVAANTQPIFCYEAGPCGYGLHRLLTKLGFDC
AVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWTPDEEQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRY
NRPTYWTKIHWRWVNELRKFRFPHQQLAFEELKRTIRQIEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIAATL
AAEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEASCRIDTHLEKDILF

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 35023; Mature: 35023

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIVYVGLDVHADTIAVAIADDGRNREIRFHGVIENTADSVLGLTKRLVAANTQPIFCY
CCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEE
EAGPCGYGLHRLLTKLGFDCAVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWT
ECCCCCHHHHHHHHHHCCCHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDEEQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRYNRPTYWTKIHWRWVNELRKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHH
RFPHQQLAFEELKRTIRQIEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIAATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AAEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEASCRIDTH
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
LEKDILF
HHHHCCC
>Mature Secondary Structure
MEKIVYVGLDVHADTIAVAIADDGRNREIRFHGVIENTADSVLGLTKRLVAANTQPIFCY
CCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEE
EAGPCGYGLHRLLTKLGFDCAVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWT
ECCCCCHHHHHHHHHHCCCHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDEEQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRYNRPTYWTKIHWRWVNELRKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHH
RFPHQQLAFEELKRTIRQIEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIAATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AAEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEASCRIDTH
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
LEKDILF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]