Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 16119964

Identifier: 16119964

GI number: 16119964

Start: 165281

End: 165739

Strand: Direct

Name: 16119964

Synonym: Atu6146

Alternate gene names: NA

Gene position: 165281-165739 (Clockwise)

Preceding gene: 41223347

Following gene: 159161987

Centisome position: 77.15

GC content: 55.12

Gene sequence:

>459_bases
ATGCGGCGCGCCTCTGACAATAACGGTCACAGATCGCCACTGGTCGACGCGGACCAATGCGGCGCGATTTGCGTACGCTC
GACAAGCCTTGTTAACAGCGAGATGGAAGCGCTTCTGATCACCAGCCGCGAAACTGGCCGCTGGGTAATCCCCAAGGGCT
GGTCGGAGGGCAGGAAAAAGCTTCATCGAGTCGCACGGGAGGAAGCTTGGGAAGAAGCCGGCGTGCGGGGAAGAGTCTGC
AAAAACCCGTATGGTCACTACCGATATGACAAGAAGGTATCACATGACGAATTCATCCCTTGTCTGGTTCAGGTTCACCT
GCTGACCGTATCGACCCTGAAGGATGATTTCCCCGAGAAAGGACAACGCCAGATCAGGTGGTTTTCTCCGGAGGAAGCTT
CTGGATTGGTTATCGAGCCGGAGCTCAAACAACTGCTTTTAAAGCTGCGACAGCAGTGA

Upstream 100 bases:

>100_bases
ACAGGACCGACTTGTCGGCCAAACTCCGGTTTGCTTGTGGCAGCCACGACTTCCTGGAGAAGGTGAAGCCGTTGCTCGAT
AAAGTGGCGCTGGCCGCATA

Downstream 100 bases:

>100_bases
CCCACACAATTGAGGACGACATGGACATCGAACTTCTCAAGAAAACACCCGACCTAAGAGCCATAGCAGATATCCGGCTG
GCGACCCTCGAGGACGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Nudix Hydrolase; Nudix Domain Protein; Hydrolase Nudix Family; MutT/NUDIX Family NTP Pyrophosphohydrolase; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; Hydrolase NUDIX Family; NUDIX Family Hydrolase; MutT Family NTP Pyrophosphatase; NTP Pyrophosphohydrolase Protein; NTP Pyrophosphohydrolase MutT Family; NUDIX Domain-Containing Protein; Bis(5-Nucleosidyl)-Tetraphosphatase; Hydrolase NUDIX Family Protein; NUDIX Superfamily Hydrolase; MutT/Nudix Family Phosphohydrolase; Orf_Bo; Phosphohistidine Phosphatase SixA; NUDIX Family Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRRASDNNGHRSPLVDADQCGAICVRSTSLVNSEMEALLITSRETGRWVIPKGWSEGRKKLHRVAREEAWEEAGVRGRVC
KNPYGHYRYDKKVSHDEFIPCLVQVHLLTVSTLKDDFPEKGQRQIRWFSPEEASGLVIEPELKQLLLKLRQQ

Sequences:

>Translated_152_residues
MRRASDNNGHRSPLVDADQCGAICVRSTSLVNSEMEALLITSRETGRWVIPKGWSEGRKKLHRVAREEAWEEAGVRGRVC
KNPYGHYRYDKKVSHDEFIPCLVQVHLLTVSTLKDDFPEKGQRQIRWFSPEEASGLVIEPELKQLLLKLRQQ
>Mature_152_residues
MRRASDNNGHRSPLVDADQCGAICVRSTSLVNSEMEALLITSRETGRWVIPKGWSEGRKKLHRVAREEAWEEAGVRGRVC
KNPYGHYRYDKKVSHDEFIPCLVQVHLLTVSTLKDDFPEKGQRQIRWFSPEEASGLVIEPELKQLLLKLRQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17494; Mature: 17494

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRASDNNGHRSPLVDADQCGAICVRSTSLVNSEMEALLITSRETGRWVIPKGWSEGRKK
CCCCCCCCCCCCCCCCCHHCCEEEEHHHHHHHHHHHEEEEECCCCCCEECCCCHHHHHHH
LHRVAREEAWEEAGVRGRVCKNPYGHYRYDKKVSHDEFIPCLVQVHLLTVSTLKDDFPEK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GQRQIRWFSPEEASGLVIEPELKQLLLKLRQQ
CHHCEEEECCCCCCCCEECHHHHHHHHHHHCC
>Mature Secondary Structure
MRRASDNNGHRSPLVDADQCGAICVRSTSLVNSEMEALLITSRETGRWVIPKGWSEGRKK
CCCCCCCCCCCCCCCCCHHCCEEEEHHHHHHHHHHHEEEEECCCCCCEECCCCHHHHHHH
LHRVAREEAWEEAGVRGRVCKNPYGHYRYDKKVSHDEFIPCLVQVHLLTVSTLKDDFPEK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GQRQIRWFSPEEASGLVIEPELKQLLLKLRQQ
CHHCEEEECCCCCCCCEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA