| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 159161987
Identifier: 159161987
GI number: 159161987
Start: 165760
End: 166743
Strand: Direct
Name: 159161987
Synonym: Atu6147
Alternate gene names: NA
Gene position: 165760-166743 (Clockwise)
Preceding gene: 16119964
Following gene: 159161989
Centisome position: 77.37
GC content: 54.17
Gene sequence:
>984_bases ATGGACATCGAACTTCTCAAGAAAACACCCGACCTAAGAGCCATAGCAGATATCCGGCTGGCGACCCTCGAGGACGGTCC GGCGCGTGGCCAACGGCTGTTGATCGCTCGAAATGCAACAGGAATTGCGTTCGAAGTGGCGTTGGATCGCGGCTTCGATA TTTCCAGCCTTTCGTTTAGGGGGACCAATATTGGTTGGAACTCGCCGACTCAGATGCGTTTTCCAATGGTTGATCCAGGC TCCGAAGGCGGCTGGGCTTTCATGCGCAACTTCGATGGCTTCCTTGTGACATGCGGGCTCGACCACATCAGCCGTCCTCT GGAAGTTGATATTGCCCACTATAATCATCCGCACCTGAAGACGAAAAGCATGCCTCAGCATGGCCGAATCTCGACCGAAA AAGCAAGATTGGTCGGATATGACGTGGACCCAGAATCCGGTGAGATCTTCTGTGAGGGGATCGTCAGGCAGGCAAGTGTC TTCGGCGAAAACCTGGAGCTGAGACGGAGGATCACTTTACCAGTCTTTGGTCAGGCGCTGCGGATTGACGACACAGTGAC AAACCGGGGGTTTCGCCCGTCTGGACATGCAATAATCTATCACCTGAACTACGGCTATCCGTTTCTGGATCAGAACCTCG AGATCACGGGTCTTCCTGAGCTCCTTGCGGCAAAATTGGTCGTGGATCCACCTCGGCCAAGTGACGATTACGGCGAATAC GTCGACTCGGTCGATAGCCTAGAGATTCCGGAAGCGGATCCGATCGTTGTCAGCAACCGTGAACTCGACATATCCGTCGG CCTGACGTTCACTCGCGACCAACTGAACAAGCTTGCTATCTGGAGAGCTTATCAGTCTGGAGTGTTTGCGCTCGGCGTCG AACCCCGCACCGACCTGGCACAGGACAGACCTTTGCTTCTGCCTGGCGAAAGCTGCAAGAACTCGTTGCAAGTTGAACTG ACCGATTGCTGTTGTTCCAACTAA
Upstream 100 bases:
>100_bases GGTTTTCTCCGGAGGAAGCTTCTGGATTGGTTATCGAGCCGGAGCTCAAACAACTGCTTTTAAAGCTGCGACAGCAGTGA CCCACACAATTGAGGACGAC
Downstream 100 bases:
>100_bases AGGAGCTGGTAGGGCCTCAAACGGGGGACAGGAAATGAAACGCGTCATGATCGTCGGTTGCCCAGGTGCTGGAAAATCCA CGCTTGCGAAGCAACTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MDIELLKKTPDLRAIADIRLATLEDGPARGQRLLIARNATGIAFEVALDRGFDISSLSFRGTNIGWNSPTQMRFPMVDPG SEGGWAFMRNFDGFLVTCGLDHISRPLEVDIAHYNHPHLKTKSMPQHGRISTEKARLVGYDVDPESGEIFCEGIVRQASV FGENLELRRRITLPVFGQALRIDDTVTNRGFRPSGHAIIYHLNYGYPFLDQNLEITGLPELLAAKLVVDPPRPSDDYGEY VDSVDSLEIPEADPIVVSNRELDISVGLTFTRDQLNKLAIWRAYQSGVFALGVEPRTDLAQDRPLLLPGESCKNSLQVEL TDCCCSN
Sequences:
>Translated_327_residues MDIELLKKTPDLRAIADIRLATLEDGPARGQRLLIARNATGIAFEVALDRGFDISSLSFRGTNIGWNSPTQMRFPMVDPG SEGGWAFMRNFDGFLVTCGLDHISRPLEVDIAHYNHPHLKTKSMPQHGRISTEKARLVGYDVDPESGEIFCEGIVRQASV FGENLELRRRITLPVFGQALRIDDTVTNRGFRPSGHAIIYHLNYGYPFLDQNLEITGLPELLAAKLVVDPPRPSDDYGEY VDSVDSLEIPEADPIVVSNRELDISVGLTFTRDQLNKLAIWRAYQSGVFALGVEPRTDLAQDRPLLLPGESCKNSLQVEL TDCCCSN >Mature_327_residues MDIELLKKTPDLRAIADIRLATLEDGPARGQRLLIARNATGIAFEVALDRGFDISSLSFRGTNIGWNSPTQMRFPMVDPG SEGGWAFMRNFDGFLVTCGLDHISRPLEVDIAHYNHPHLKTKSMPQHGRISTEKARLVGYDVDPESGEIFCEGIVRQASV FGENLELRRRITLPVFGQALRIDDTVTNRGFRPSGHAIIYHLNYGYPFLDQNLEITGLPELLAAKLVVDPPRPSDDYGEY VDSVDSLEIPEADPIVVSNRELDISVGLTFTRDQLNKLAIWRAYQSGVFALGVEPRTDLAQDRPLLLPGESCKNSLQVEL TDCCCSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36368; Mature: 36368
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIELLKKTPDLRAIADIRLATLEDGPARGQRLLIARNATGIAFEVALDRGFDISSLSFR CCCEEECCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEE GTNIGWNSPTQMRFPMVDPGSEGGWAFMRNFDGFLVTCGLDHISRPLEVDIAHYNHPHLK CCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCEEEEECHHHCCCCEEEEEEECCCCCCC TKSMPQHGRISTEKARLVGYDVDPESGEIFCEGIVRQASVFGENLELRRRITLPVFGQAL CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCEE RIDDTVTNRGFRPSGHAIIYHLNYGYPFLDQNLEITGLPELLAAKLVVDPPRPSDDYGEY EECHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEECCHHHHHEEEEECCCCCCCHHHHH VDSVDSLEIPEADPIVVSNRELDISVGLTFTRDQLNKLAIWRAYQSGVFALGVEPRTDLA HCCCCCCCCCCCCCEEEECCEEEEEEEEEECHHHHHHEEEEEEHHCCEEEEECCCCCCHH QDRPLLLPGESCKNSLQVELTDCCCSN CCCCEEECCHHHCCCEEEEEECCCCCC >Mature Secondary Structure MDIELLKKTPDLRAIADIRLATLEDGPARGQRLLIARNATGIAFEVALDRGFDISSLSFR CCCEEECCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEE GTNIGWNSPTQMRFPMVDPGSEGGWAFMRNFDGFLVTCGLDHISRPLEVDIAHYNHPHLK CCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCEEEEECHHHCCCCEEEEEEECCCCCCC TKSMPQHGRISTEKARLVGYDVDPESGEIFCEGIVRQASVFGENLELRRRITLPVFGQAL CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCEE RIDDTVTNRGFRPSGHAIIYHLNYGYPFLDQNLEITGLPELLAAKLVVDPPRPSDDYGEY EECHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEECCHHHHHEEEEECCCCCCCHHHHH VDSVDSLEIPEADPIVVSNRELDISVGLTFTRDQLNKLAIWRAYQSGVFALGVEPRTDLA HCCCCCCCCCCCCCEEEECCEEEEEEEEEECHHHHHHEEEEEEHHCCEEEEECCCCCCHH QDRPLLLPGESCKNSLQVELTDCCCSN CCCCEEECCHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA