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The map label for this gene is accA [H]

Identifier: 16119957

GI number: 16119957

Start: 158298

End: 159863

Strand: Direct

Name: accA [H]

Synonym: Atu6139

Alternate gene names: 16119957

Gene position: 158298-159863 (Clockwise)

Preceding gene: 159161984

Following gene: 159161985

Centisome position: 73.89

GC content: 54.6

Gene sequence:

>1566_bases
ATGCTTAAGACCAATCGCAGGAATTTTATGATGGGCACCGCGGCGATAGCGGTCGCTTCAACTGCCGGTGCGAAGTTCAC
CTTCGCGCAAGAACGCCGGGCGCTTCGCCTGGGTGTGAACGGATTGCCGAACTCGCTGGAGCCGGTCAATGCAATCAGCA
ATGTCGGCCCGCGTATCGTCAACCAGATATTCGACACGCTGATAGCGCGCGATTTTTTCGCGAAGGGAGCTCCCGGCAAT
GCCATCGACCTCGTTCCGGCACTTGCCGAGAGCTGGGAGCGCATCGATGAGAAATCGGTTCGCTTCAAGCTGCGGCAGAA
GGTCATGTTCCACGATGGTGTTGAACTGACCGCGGACGATGTCGCATACACCTTTTCTTCCGAACGCCTTTGGGGTCCCG
AAGCGATCAAGAAAATCCCGCTTGGGAAATCCTATTCGCTTGATTTCGATGAGCCCGTGGTCGAGGACAAATACACAGTC
ACACTTCGCACAAAGACCCCGAGCTATCTCATCGAGACCTTCGTCGCATCCTGGATGAGCCGCATTGTTCCCAAAGAATA
CTACAAGAAACTGGGAGCAGTAGATTTCGGTAACAAGCCCGTTGGAACAGGCCCGTACAAGTTCGTGGAATTTGTTGCCG
GCGACCGTGTGGTGCTGGAAGCCAACGACGCCTACTGGGGTCCAAAGCCGACTGCATCGAAGATCACCTACCAGATCGTC
GCAGAGCCAGCCACACGCGTCGCGGGTCTGATCAGCGGTGAATACGATATCATCACTACCCTGACGCCGGACGACATTCA
GCTGATAAATAGCTATCCAGACCTCGAAACGCGCGGGACGCTCATCGAAAACTTCCACATGTTCACCTTCAATATGAACC
AAGAAGTTTTCAAGGATAAGAAGCTTCGGCGCGCTCTTGCTCTGGCTGTCAACCGGCCAATCATGGTTGAAGCGCTCTGG
AAGAAACAAGCATCTATCCCGGCCGGCTTCAATTTCCCGAACTATGGGGAAACCTTCGATCCAAAGCGTAAGGCCATGGA
ATATAATGTCGAGGAGGCCAAGCGTCTCGTCAAGGAGAGCGGCTACGATGGAACGCCGATCACCTATCACACGATGGGCA
ACTATTATGCCAACGCCATGCCTGCGTTGATGATGATGATCGAAATGTGGAAGCAGATCGGTGTGAACGTGGTCATGAAA
ACCTACGCACCGGGTAGCTTCCCCCCGGACAACCAGACCTGGATGAGAAACTGGTCCAACGGCCAATGGATGACCGATGC
CTACGCCACGATCGTCCCCGAATTCGGGCCGAATGGTCAGGTTCAAAAGCGTTGGGGTTGGAAGGCGCCGGCCGAGTTCA
ACGAATTATGTCAGAAGGTCACGGTTCTGCCGAATGGCAAGGAGCGCTTCGACGCCTACAATCGCATGCGGGACATTTTC
GAAGAGGAGGCGCCAGCCGTCATTCTCTATCAGCCGTATGACGTTTATGCCGCGCGCAAGGATGTCCACTGGAAGCCCGT
GAGCTTCGAGATGATGGAATTCCGCAACAATCTCAGCTTCGGCTGA

Upstream 100 bases:

>100_bases
AATACCGGAAAAGCTGCGGAAGAAGTTCGTTGTTGCGAACTAGGTTCGACGGCCGCGCGCGAATTAAAGCCTCATTCAAC
AGAGCTGGGAGGAAAACCAC

Downstream 100 bases:

>100_bases
ACTCGTTAATCGAGAAGGCGGCGCGCGCGAGATGTGCGCGTCGCCCTGGAGGAGCCTAAGTTGTCAAATCTACTAACAGT
TCGCGACCTGATCGTTCAGG

Product: ABC transporter, substrate binding protein (agrocinopines A and B)

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: Dipeptide-binding protein; DBP [H]

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLKTNRRNFMMGTAAIAVASTAGAKFTFAQERRALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGN
AIDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTV
TLRTKTPSYLIETFVASWMSRIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIV
AEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDKKLRRALALAVNRPIMVEALW
KKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGTPITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMK
TYAPGSFPPDNQTWMRNWSNGQWMTDAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIF
EEEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG

Sequences:

>Translated_521_residues
MLKTNRRNFMMGTAAIAVASTAGAKFTFAQERRALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGN
AIDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTV
TLRTKTPSYLIETFVASWMSRIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIV
AEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDKKLRRALALAVNRPIMVEALW
KKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGTPITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMK
TYAPGSFPPDNQTWMRNWSNGQWMTDAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIF
EEEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG
>Mature_521_residues
MLKTNRRNFMMGTAAIAVASTAGAKFTFAQERRALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGN
AIDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTV
TLRTKTPSYLIETFVASWMSRIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIV
AEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDKKLRRALALAVNRPIMVEALW
KKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGTPITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMK
TYAPGSFPPDNQTWMRNWSNGQWMTDAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIF
EEEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG

Specific function: Dipeptide-binding protein of a transport system that can be subject to osmotic shock. DppA is also required for peptide chemotaxis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=453, Percent_Identity=25.60706401766, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1787551, Length=345, Percent_Identity=26.0869565217391, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1787495, Length=417, Percent_Identity=27.8177458033573, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787052, Length=390, Percent_Identity=24.8717948717949, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1789397, Length=504, Percent_Identity=23.6111111111111, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789887, Length=330, Percent_Identity=25.1515151515152, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787762, Length=333, Percent_Identity=25.8258258258258, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59216; Mature: 59216

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTNRRNFMMGTAAIAVASTAGAKFTFAQERRALRLGVNGLPNSLEPVNAISNVGPRIV
CCCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHEEECCCCCCCCCCHHHHHHHCCHHHH
NQIFDTLIARDFFAKGAPGNAIDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
VAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTVTLRTKTPSYLIETFVASWMS
EEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
RIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIV
HHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHEEEEEE
AEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDK
ECHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCHHHHHHH
KLRRALALAVNRPIMVEALWKKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKES
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHC
GYDGTPITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMKTYAPGSFPPDNQTWMRNWSN
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCC
GQWMTDAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIF
CCEECCHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EEEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG
HHCCCEEEEECCCHHHECCCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLKTNRRNFMMGTAAIAVASTAGAKFTFAQERRALRLGVNGLPNSLEPVNAISNVGPRIV
CCCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHEEECCCCCCCCCCHHHHHHHCCHHHH
NQIFDTLIARDFFAKGAPGNAIDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
VAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTVTLRTKTPSYLIETFVASWMS
EEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
RIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIV
HHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHEEEEEE
AEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDK
ECHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCHHHHHHH
KLRRALALAVNRPIMVEALWKKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKES
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHC
GYDGTPITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMKTYAPGSFPPDNQTWMRNWSN
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCC
GQWMTDAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIF
CCEECCHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EEEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG
HHCCCEEEEECCCHHHECCCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1702779; 1956284; 7536291; 8041620; 9278503; 9298646; 9600841; 8563629; 8527431 [H]