| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is yfaO [C]
Identifier: 16119932
GI number: 16119932
Start: 137671
End: 138156
Strand: Direct
Name: yfaO [C]
Synonym: Atu6117
Alternate gene names: 16119932
Gene position: 137671-138156 (Clockwise)
Preceding gene: 159161975
Following gene: 159161977
Centisome position: 64.26
GC content: 55.56
Gene sequence:
>486_bases ATGGCTGAAATTCCGATCCGATGTTTTGCCGTATCCGTCGTACTTCTTCGCAGCGTCGCCGCTGGACCCGAGGTACTGCT TTTACGCCGGAATCGCACGCTGATCGGCGAGTGGTGCCAGATTGCCGGTGGAATTGAAGAGGGGGAGAAAGCATGGGAAG CAGCGCTGCGCGAAGTTCGTGAAGAAACCGGCCTGACTTGTGGTCAGCTCTATTCGGCAGACATATGTGAGCAGTTCTAT GAGGCGGATCGCGACGCAATCAGCATGCTGCCGGTCTTCGTTGGTTTCGTGGATGCTGGGGCAACTGTTGTCATCAATCA CGAACATAGCGAATTTCGATGGGTGCCGTTCGAAACGGCCTTGGGGATGGTGCCTTTTGCGGGTCAACGCCATGTGCTGA AGCATGTGCAGGCCGAGTTCGTACAGCGACAGCCGGTTCGACACCTCCTTATCTATTCGACGCGTGGAGCAATGCGATGT TCATGA
Upstream 100 bases:
>100_bases GCAAACTGCTATAGACCATCGAAATGCGAATGTTTACCCCTGATGGATTGATGCCGCTTAGGTCTGCCGGAAACTATGTA AGTGAAGGGAAGCGCAGCAG
Downstream 100 bases:
>100_bases CGTCGAGTCAGAGCCGTCTCGGCATCGCTCGACTGTCGAACCACAGGTAGTTCAGACGCACCCATCGGCGATGGCGTCGA AGGAACGGCAGGTCCGCAGC
Product: MutT family NTP pyrophosphatase
Products: NA
Alternate protein names: NTP Pyrophosphohydrolase Including Oxidative Damage Repair; MutT/Nudix Family Protein; NUDIX Hydrolase Protein; NUDIX Hydrolase Domain-Containing Protein; Nucleoside Polyphosphate Hydrolase Protein; MutT Family NTP Pyrophosphatase; NTP Pyrophosphohydrolase MutT Family; Hydrolase NUDIX Family Protein; MutT Family Pyrophosphohydrolase; NUDIX Domain-Containing Protein; Lipoyltransferase
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAEIPIRCFAVSVVLLRSVAAGPEVLLLRRNRTLIGEWCQIAGGIEEGEKAWEAALREVREETGLTCGQLYSADICEQFY EADRDAISMLPVFVGFVDAGATVVINHEHSEFRWVPFETALGMVPFAGQRHVLKHVQAEFVQRQPVRHLLIYSTRGAMRC S
Sequences:
>Translated_161_residues MAEIPIRCFAVSVVLLRSVAAGPEVLLLRRNRTLIGEWCQIAGGIEEGEKAWEAALREVREETGLTCGQLYSADICEQFY EADRDAISMLPVFVGFVDAGATVVINHEHSEFRWVPFETALGMVPFAGQRHVLKHVQAEFVQRQPVRHLLIYSTRGAMRC S >Mature_160_residues AEIPIRCFAVSVVLLRSVAAGPEVLLLRRNRTLIGEWCQIAGGIEEGEKAWEAALREVREETGLTCGQLYSADICEQFYE ADRDAISMLPVFVGFVDAGATVVINHEHSEFRWVPFETALGMVPFAGQRHVLKHVQAEFVQRQPVRHLLIYSTRGAMRCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 18044; Mature: 17913
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIPIRCFAVSVVLLRSVAAGPEVLLLRRNRTLIGEWCQIAGGIEEGEKAWEAALREVR CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH EETGLTCGQLYSADICEQFYEADRDAISMLPVFVGFVDAGATVVINHEHSEFRWVPFETA HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHH LGMVPFAGQRHVLKHVQAEFVQRQPVRHLLIYSTRGAMRCS HCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCC >Mature Secondary Structure AEIPIRCFAVSVVLLRSVAAGPEVLLLRRNRTLIGEWCQIAGGIEEGEKAWEAALREVR CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH EETGLTCGQLYSADICEQFYEADRDAISMLPVFVGFVDAGATVVINHEHSEFRWVPFETA HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHH LGMVPFAGQRHVLKHVQAEFVQRQPVRHLLIYSTRGAMRCS HCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA