Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 159161977

Identifier: 159161977

GI number: 159161977

Start: 138585

End: 138941

Strand: Direct

Name: 159161977

Synonym: Atu6119

Alternate gene names: NA

Gene position: 138585-138941 (Clockwise)

Preceding gene: 16119932

Following gene: 159161979

Centisome position: 64.69

GC content: 63.31

Gene sequence:

>357_bases
ATGGGCGCGGCCCGAGCTAACCGGAAAAGGAGCACGACAATGGCAGTCATCGGCGAATTCAACACCAACGGCAACAACTC
CATCATCGGCAACGTGCGCACGCTCACAGTCAGCATGAAGGCCCGCCTGAACCCCATCGAGCGCGTCTCGCGCGACGCTC
CGGACTTCCGCATCACCGCCGGCAACGGCGTCGAGGTCGGCGCGGGTTGGAACAAGGTCTCCAACGATGGCGAGCCCTTC
ATCTCCGTCAAGCTCGACGACCCCAGCTTCAATGCCCCGATCACAGCAGCCCTTTGGCCGGGCGAGAAGGAAGGCGAATA
CGCCCTCATCTGGAATCGCCCGAAGCGGGAGGCCTGA

Upstream 100 bases:

>100_bases
CGGGCCAAGAAAGCCGCTCCCGGCCGTCCTCCACTTCGTTCCGGCCGCCAGCGGTGCGGCGTCGATCGCCGTCGGCCTTA
ACACCGTCATCGAGAACGCG

Downstream 100 bases:

>100_bases
TCACCGCAACGAGCTCCGCCGAAAGGCGGGGCTCTTTTCGTGTCGCGAGGGAGAGCCGGGCGCAGGCATCGAGCCTGCTT
CCGGCTTTTCCGGTGCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MGAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWNKVSNDGEPF
ISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA

Sequences:

>Translated_118_residues
MGAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWNKVSNDGEPF
ISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA
>Mature_117_residues
GAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWNKVSNDGEPFI
SVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA

Specific function: Unknown

COG id: COG5489

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007948 [H]

Pfam domain/function: PF05284 DUF736 [H]

EC number: NA

Molecular weight: Translated: 12844; Mature: 12712

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITA
CCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEEEC
GNGVEVGAGWNKVSNDGEPFISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA
CCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
GAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITA
CCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEEEC
GNGVEVGAGWNKVSNDGEPFISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA
CCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]