| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 159161977
Identifier: 159161977
GI number: 159161977
Start: 138585
End: 138941
Strand: Direct
Name: 159161977
Synonym: Atu6119
Alternate gene names: NA
Gene position: 138585-138941 (Clockwise)
Preceding gene: 16119932
Following gene: 159161979
Centisome position: 64.69
GC content: 63.31
Gene sequence:
>357_bases ATGGGCGCGGCCCGAGCTAACCGGAAAAGGAGCACGACAATGGCAGTCATCGGCGAATTCAACACCAACGGCAACAACTC CATCATCGGCAACGTGCGCACGCTCACAGTCAGCATGAAGGCCCGCCTGAACCCCATCGAGCGCGTCTCGCGCGACGCTC CGGACTTCCGCATCACCGCCGGCAACGGCGTCGAGGTCGGCGCGGGTTGGAACAAGGTCTCCAACGATGGCGAGCCCTTC ATCTCCGTCAAGCTCGACGACCCCAGCTTCAATGCCCCGATCACAGCAGCCCTTTGGCCGGGCGAGAAGGAAGGCGAATA CGCCCTCATCTGGAATCGCCCGAAGCGGGAGGCCTGA
Upstream 100 bases:
>100_bases CGGGCCAAGAAAGCCGCTCCCGGCCGTCCTCCACTTCGTTCCGGCCGCCAGCGGTGCGGCGTCGATCGCCGTCGGCCTTA ACACCGTCATCGAGAACGCG
Downstream 100 bases:
>100_bases TCACCGCAACGAGCTCCGCCGAAAGGCGGGGCTCTTTTCGTGTCGCGAGGGAGAGCCGGGCGCAGGCATCGAGCCTGCTT CCGGCTTTTCCGGTGCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MGAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWNKVSNDGEPF ISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA
Sequences:
>Translated_118_residues MGAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWNKVSNDGEPF ISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA >Mature_117_residues GAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWNKVSNDGEPFI SVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA
Specific function: Unknown
COG id: COG5489
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007948 [H]
Pfam domain/function: PF05284 DUF736 [H]
EC number: NA
Molecular weight: Translated: 12844; Mature: 12712
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITA CCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEEEC GNGVEVGAGWNKVSNDGEPFISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA CCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC >Mature Secondary Structure GAARANRKRSTTMAVIGEFNTNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITA CCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEEEC GNGVEVGAGWNKVSNDGEPFISVKLDDPSFNAPITAALWPGEKEGEYALIWNRPKREA CCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]