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The map label for this gene is parB [H]

Identifier: 159161973

GI number: 159161973

Start: 125894

End: 127651

Strand: Direct

Name: parB [H]

Synonym: Atu6103

Alternate gene names: 159161973

Gene position: 125894-127651 (Clockwise)

Preceding gene: 16119916

Following gene: 16119918

Centisome position: 58.76

GC content: 63.08

Gene sequence:

>1758_bases
ATGCAAATCCTTAAACTTGATCCCCGTGCGCTGAAGGACAATCCCGATGACACGCGTCGCTCGAAATCCTCGCCACAATC
CGACGCGCTGTTGCTTGCGACGGTGAAAGCGGTCGGCATCATCCAGCCGCCGGTCATCTCGCCGGAAGTCGACGGTGGCA
ATGGCTACATCATCCAGGCCGGACACCGCCGCGTGAAGCAAGCGATCGCAGCGGGACTGGAGGAAATCACCGTCCTCGTC
GTCGCAGCGGCCAACGACAATGGCGCGATGCGCTCGATGGTGGAAAACATCGCCCGCGAGCCGCTCAACCCCGTCGACCA
ATGGCGCGGCATCGAACGCCTGGTTGCGCTCGGCTGGACCGAGGAAGCGATCGGCGTGGCTCTCGCACTGCCGGTCCGCC
AGATCAGGAAGCTCAGGCTCCTGGCCAACGTGCTGCCTGCCATGCTCGACCATATGGCGCTCGGCGACATGCCGAACGAG
CAGCAGCTCCGGACCATCGCCGCAGCCTCGCTCGACGAGCAGAGGCAAGTCTGGAAAGCTCACAAGCCGAAGAAGTCCGA
GCGGGCCGACTGGTACAACATCTCTCGAGCACTCTCCAAGACCCGCATGTTCGCCAAGGATGCGAGCTTTGGCGATGACC
TCGCTCAGGCCTACGGCATCGAATGGGTCGAGGATCTGTTCGCTCCGGCCGACCAGGACAGCCGCTACACCACCAACGTG
GAAGCGTTTCTCGGCGCCCAGCAGGAATGGATGACGAACAACCTTCCGAAGAAGGGGTCGATCATCGAGGTCAACAACTG
GGGCCAGCCGGAACTGCCGAAGAAAGCGGAGCGCGTTTACGGCAAGCCGTCCAAGTCCGATCACGTAGGGATGTATCTCG
ACCGTGACGGCAAGGTGCAGTCAGTCGCGTACCGGATGCCGGAGGATAAGAAAACGAAGAAGGGCGGTTCGTCCAAGACG
GGCGGTCTGGCCGAAGCCGATGATGCAATCGTCGACGCGCCGAAGCCGCGCCCCGATGTGACCCAGAAGGGGCAGGACAT
GATCGGCGACTTCCGCACCGACGCCCTGCATGAGGCGCTTGGACGCGCCCCGATCGAGGACGACATGCTGATGGCCCTGC
TCGTGCTTGCGTTCGCCGGCCTGAACGTCCGCGTGGATTCCGGCGCGACCGATACCGTGTTCGGGTCGAAGCGCTTCAAG
CGCCACGCCGCCCGGCTGATCGGCGAAGACGGCAGGCTCGCCTTCGACGTGGAGACACTGCGCGTGGCCGCGCGTTCGAT
GCTGATCGATGTGCTGTCGTGCCGGCGGGGTATGTCCAACGGTGGCGTGATCTCCAGGATCGCAGGTCACGCGATCGGCG
CCGACAACTTCCTGCCGAACATGGGCTCGGAGGACTTTCTACTGTGCCTGTCTCGTCAGGCGATGGAAGCAGCGGCGAAG
AAGGCGAACGTGCTTCCGCGCCAGAAGGTGCGGGAGACTCGTGCGGCTCTCGTTGATCATTTCAGGCAAGAGCGCTTCGT
TCACACGACCGCACTCTTCGCGCCCGATCCGCAGGACATCGTGGATCTCATCAGGAGTGGCGAGGTTCTCGATGACGACA
GCGCGGAAGAAGCAGACGTCGATGAGTCCGCCCTTGATGGAGAAGAAGGCCTCGCCGCCCCCGAAGACGAGGCCGATCTT
CCAGACATCGCCGACGACACTCCCGAAGCCGTCGATCCTGACGAAGAGCAGGATGCTTACGGGATCGCCGCGGAGTAG

Upstream 100 bases:

>100_bases
CCCGTCCGCTCCGCGGTCCGGGAAGTGTCTTTGGAAAGAACTGAAGACTGAAAAGGGCTGGCAAGGCGCCGGTCCATCAA
TCCCGGAAGGAGCCAATCTC

Downstream 100 bases:

>100_bases
CCGCGTCCCTCCTTCCCCTTCCGAACGATTGTCCGCCGCCGGTGATTTCCACCGGCGGCGGCTTCGTTTCCAGCCCTAAA
GATCAAGGAGATCAACATGT

Product: plasmid partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MQILKLDPRALKDNPDDTRRSKSSPQSDALLLATVKAVGIIQPPVISPEVDGGNGYIIQAGHRRVKQAIAAGLEEITVLV
VAAANDNGAMRSMVENIAREPLNPVDQWRGIERLVALGWTEEAIGVALALPVRQIRKLRLLANVLPAMLDHMALGDMPNE
QQLRTIAAASLDEQRQVWKAHKPKKSERADWYNISRALSKTRMFAKDASFGDDLAQAYGIEWVEDLFAPADQDSRYTTNV
EAFLGAQQEWMTNNLPKKGSIIEVNNWGQPELPKKAERVYGKPSKSDHVGMYLDRDGKVQSVAYRMPEDKKTKKGGSSKT
GGLAEADDAIVDAPKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVLAFAGLNVRVDSGATDTVFGSKRFK
RHAARLIGEDGRLAFDVETLRVAARSMLIDVLSCRRGMSNGGVISRIAGHAIGADNFLPNMGSEDFLLCLSRQAMEAAAK
KANVLPRQKVRETRAALVDHFRQERFVHTTALFAPDPQDIVDLIRSGEVLDDDSAEEADVDESALDGEEGLAAPEDEADL
PDIADDTPEAVDPDEEQDAYGIAAE

Sequences:

>Translated_585_residues
MQILKLDPRALKDNPDDTRRSKSSPQSDALLLATVKAVGIIQPPVISPEVDGGNGYIIQAGHRRVKQAIAAGLEEITVLV
VAAANDNGAMRSMVENIAREPLNPVDQWRGIERLVALGWTEEAIGVALALPVRQIRKLRLLANVLPAMLDHMALGDMPNE
QQLRTIAAASLDEQRQVWKAHKPKKSERADWYNISRALSKTRMFAKDASFGDDLAQAYGIEWVEDLFAPADQDSRYTTNV
EAFLGAQQEWMTNNLPKKGSIIEVNNWGQPELPKKAERVYGKPSKSDHVGMYLDRDGKVQSVAYRMPEDKKTKKGGSSKT
GGLAEADDAIVDAPKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVLAFAGLNVRVDSGATDTVFGSKRFK
RHAARLIGEDGRLAFDVETLRVAARSMLIDVLSCRRGMSNGGVISRIAGHAIGADNFLPNMGSEDFLLCLSRQAMEAAAK
KANVLPRQKVRETRAALVDHFRQERFVHTTALFAPDPQDIVDLIRSGEVLDDDSAEEADVDESALDGEEGLAAPEDEADL
PDIADDTPEAVDPDEEQDAYGIAAE
>Mature_585_residues
MQILKLDPRALKDNPDDTRRSKSSPQSDALLLATVKAVGIIQPPVISPEVDGGNGYIIQAGHRRVKQAIAAGLEEITVLV
VAAANDNGAMRSMVENIAREPLNPVDQWRGIERLVALGWTEEAIGVALALPVRQIRKLRLLANVLPAMLDHMALGDMPNE
QQLRTIAAASLDEQRQVWKAHKPKKSERADWYNISRALSKTRMFAKDASFGDDLAQAYGIEWVEDLFAPADQDSRYTTNV
EAFLGAQQEWMTNNLPKKGSIIEVNNWGQPELPKKAERVYGKPSKSDHVGMYLDRDGKVQSVAYRMPEDKKTKKGGSSKT
GGLAEADDAIVDAPKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVLAFAGLNVRVDSGATDTVFGSKRFK
RHAARLIGEDGRLAFDVETLRVAARSMLIDVLSCRRGMSNGGVISRIAGHAIGADNFLPNMGSEDFLLCLSRQAMEAAAK
KANVLPRQKVRETRAALVDHFRQERFVHTTALFAPDPQDIVDLIRSGEVLDDDSAEEADVDESALDGEEGLAAPEDEADL
PDIADDTPEAVDPDEEQDAYGIAAE

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 63964; Mature: 63964

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILKLDPRALKDNPDDTRRSKSSPQSDALLLATVKAVGIIQPPVISPEVDGGNGYIIQA
CCEEECCCHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
GHRRVKQAIAAGLEEITVLVVAAANDNGAMRSMVENIAREPLNPVDQWRGIERLVALGWT
HHHHHHHHHHHCHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EEAIGVALALPVRQIRKLRLLANVLPAMLDHMALGDMPNEQQLRTIAAASLDEQRQVWKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
HKPKKSERADWYNISRALSKTRMFAKDASFGDDLAQAYGIEWVEDLFAPADQDSRYTTNV
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHCCCCCCCCCEECCH
EAFLGAQQEWMTNNLPKKGSIIEVNNWGQPELPKKAERVYGKPSKSDHVGMYLDRDGKVQ
HHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCH
SVAYRMPEDKKTKKGGSSKTGGLAEADDAIVDAPKPRPDVTQKGQDMIGDFRTDALHEAL
HHHHCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH
GRAPIEDDMLMALLVLAFAGLNVRVDSGATDTVFGSKRFKRHAARLIGEDGRLAFDVETL
CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHH
RVAARSMLIDVLSCRRGMSNGGVISRIAGHAIGADNFLPNMGSEDFLLCLSRQAMEAAAK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KANVLPRQKVRETRAALVDHFRQERFVHTTALFAPDPQDIVDLIRSGEVLDDDSAEEADV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCCCCC
DESALDGEEGLAAPEDEADLPDIADDTPEAVDPDEEQDAYGIAAE
CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQILKLDPRALKDNPDDTRRSKSSPQSDALLLATVKAVGIIQPPVISPEVDGGNGYIIQA
CCEEECCCHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
GHRRVKQAIAAGLEEITVLVVAAANDNGAMRSMVENIAREPLNPVDQWRGIERLVALGWT
HHHHHHHHHHHCHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EEAIGVALALPVRQIRKLRLLANVLPAMLDHMALGDMPNEQQLRTIAAASLDEQRQVWKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
HKPKKSERADWYNISRALSKTRMFAKDASFGDDLAQAYGIEWVEDLFAPADQDSRYTTNV
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHCCCCCCCCCEECCH
EAFLGAQQEWMTNNLPKKGSIIEVNNWGQPELPKKAERVYGKPSKSDHVGMYLDRDGKVQ
HHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCH
SVAYRMPEDKKTKKGGSSKTGGLAEADDAIVDAPKPRPDVTQKGQDMIGDFRTDALHEAL
HHHHCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH
GRAPIEDDMLMALLVLAFAGLNVRVDSGATDTVFGSKRFKRHAARLIGEDGRLAFDVETL
CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHH
RVAARSMLIDVLSCRRGMSNGGVISRIAGHAIGADNFLPNMGSEDFLLCLSRQAMEAAAK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KANVLPRQKVRETRAALVDHFRQERFVHTTALFAPDPQDIVDLIRSGEVLDDDSAEEADV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCCCCC
DESALDGEEGLAAPEDEADLPDIADDTPEAVDPDEEQDAYGIAAE
CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]