Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is virE3

Identifier: 16119806

GI number: 16119806

Start: 207993

End: 210047

Strand: Direct

Name: virE3

Synonym: Atu6191

Alternate gene names: NA

Gene position: 207993-210047 (Clockwise)

Preceding gene: 16119805

Following gene: NA

Centisome position: 97.09

GC content: 52.26

Gene sequence:

>2055_bases
ATGGTCGACACGACGAAGAAGAGTGTCGCGAAGTCGCTTACGGCTGACATGCGCCGTTCTGCTAAGCGGCTTTCTAAGCA
AATGCGTAAAGCCTCGCTTACTGAAGAGGAGGCAACAAGGAATCTAGCCCGGCTCGAAACGCCGGACCAGAAGCGAAAAT
ATGTCGCCGATATGCAGATAATCGACAAGCTGGAAGACGGCTTTCGAGGCGAAATAAGCTATAAAATGCTGGGAAATAAA
CAGCTTCGGGTCGACAGCCCAAAAGAATTAACGCGCGAGCATGGTATAATAAGAAAAACAAGAAAGGTTCTGAAGCGTAA
CGCAGAGACTGGCAATGTTTACTTGGGTCTCCACGAAAAGAAGACCTGGAGGAGCGTTAGCAGCCATCTTTATGCCGAGG
ACGGTACACTTCGCGCGAAGCATGTGAAATACAAAGACGGACGCTTTGAAGAAAAATGGGAACGAGACGAAAATGGCCTG
CTGTTCCGCACGCAGTTTGTCAACCGAAATCGGCTATTTCAACCTATTTCCGAGAAGGTCAGCACACCCTACCGGAGCGG
ACCGGAAAACCGGCTCTTTCGTGAACTAACCCGTCGAAAAGGTTCCAAGCAGGAAACTTTTGAGCGGGACGAAAAAGGCA
ACCTCGAGCTCATCGGCAGCAAACGTCTCGGCTTTTCCAAGAATTCGACGAAAGCCGTGGATCGTCAGACCTCTCAGACG
ACGATTCGAAAACTTGGTGGCGCATTCAGCAAATCTTATAGATCCCTGCTAGACACAGAGGGCAACGAACTTGGCCGAGA
TATATCGAGTCATCGACGGCTCTTCAACAAGCGATCGGCTGTCTACGATGAGGCTAGCGGGCAATTGACGAGCACCAAGC
ATACGTTCGGTAAGATCTACAAGAGTGAAACAGCGTATTTGAACGCTGATATCAAAAAAGTCTCAAAAAAGATACTCGGC
GTGACGGTTCGTCGGAAACTGACGACGCTAAGTGAACAAGAACACGACGCTCAGAAGCTGCGAAATTCGGAATCCATTGA
GCATAGGAAGGCTTGGCAAGAGCGCGCAGTTATCCCTAGATCGCCTCCACGGGAGACGGCAAATGTGGATTCGGCGCCGC
AGTCGCATCTGGTCAACTCTCTTAGAGACGGCCGTCGTGATGAGGCTGAGCCTAGGGTTGTGCCTGCAAAAGACCGACGA
TTAGAAGGCGTTATACAAAATTCACCCTTGTTTCGGCAACCGAACTCCGAGCGACGGGTCGGTTCCCAAACACTACCTCC
ATCGTCAAATGTGCGTGCCTCAGATCCAGTTTTTCCAAGGGAAGGCGCTAAGTCGGAAAAAGGGCCAGTGGCGGTCAATC
TCCAGCGTGATAATGAAAGGGAAAAGCAAGAGGAAAAAAACCTCAGTGAGAGGCGGGGAAATCTCTTCCGGTCAAGCCGG
TCAATAACAGAGACGTCGTTTCCCGGATCGCCGGAAAGAATAACGATGTTAGGTTCGCGGCGGGCCTCGATAAACCCATC
CGCCGATCCGCAATCGCCGGTCGGCAGAACGGATTCCCAAGCGCCGCCGATGTCCTTATTTCCGATCAATAATCATCAGT
CGGATCCAAACGAGCAAGAGCTCTTGAGTTTCCTGCATAGCGTGCCAGTCCCGCCGCCTTTGGAAGTACATGGCGCACCA
GGCGGGCGTGTTGAGGACAGCCTCCGTGGAGCTTCCGGAGACAGCCTGGTGCGAACGAGTTCAGTGTCGGAGAGTGTGTT
CGATGAACATTCGCAAGGGCCTTTGGAACGCGATCACTCGACCAATGCGACAAGTGAGCGCTTTGATCCGCAGGCTTTGT
TTGGCGAACCGGGCTTGTCGCGCGTCTCAGAAACACGACCAGAACTCTCGATGCAAGGCGACCATTTGACAAATTCGGAA
CAGCAAGCGTTACTGAATGAACTGCTTAGTGTGCCATTACCGGGTCCTTTGCCGAAGGCGGATCATGAGCGACCGAGGGT
TTTGGAAAGCTCACGGAGCCGAGAGCGCTCCATGTCAGGAGGGCTTTCACTTTAG

Upstream 100 bases:

>100_bases
CCGACCGCGCGGCCCAACCGTAAACAGTCTGTAGATTTCCTGATACCGCGTCAGTGACGAAGCCCTTTAGTTCAAAATAT
GCATTTGAAAGGATTCAACA

Downstream 100 bases:

>100_bases
AATGAAATTACCGATTCAAGTGTCCACCCAGTGGCTTGATTGAAACAGGCCAAGATGTGCGGAACACACCACTTCGAGGT
GGTGCTCGAGGAATAGTTCA

Product: virA/G regulated protein

Products: NA

Alternate protein names: Effector Protein; Virulence VirE3 Protein

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MVDTTKKSVAKSLTADMRRSAKRLSKQMRKASLTEEEATRNLARLETPDQKRKYVADMQIIDKLEDGFRGEISYKMLGNK
QLRVDSPKELTREHGIIRKTRKVLKRNAETGNVYLGLHEKKTWRSVSSHLYAEDGTLRAKHVKYKDGRFEEKWERDENGL
LFRTQFVNRNRLFQPISEKVSTPYRSGPENRLFRELTRRKGSKQETFERDEKGNLELIGSKRLGFSKNSTKAVDRQTSQT
TIRKLGGAFSKSYRSLLDTEGNELGRDISSHRRLFNKRSAVYDEASGQLTSTKHTFGKIYKSETAYLNADIKKVSKKILG
VTVRRKLTTLSEQEHDAQKLRNSESIEHRKAWQERAVIPRSPPRETANVDSAPQSHLVNSLRDGRRDEAEPRVVPAKDRR
LEGVIQNSPLFRQPNSERRVGSQTLPPSSNVRASDPVFPREGAKSEKGPVAVNLQRDNEREKQEEKNLSERRGNLFRSSR
SITETSFPGSPERITMLGSRRASINPSADPQSPVGRTDSQAPPMSLFPINNHQSDPNEQELLSFLHSVPVPPPLEVHGAP
GGRVEDSLRGASGDSLVRTSSVSESVFDEHSQGPLERDHSTNATSERFDPQALFGEPGLSRVSETRPELSMQGDHLTNSE
QQALLNELLSVPLPGPLPKADHERPRVLESSRSRERSMSGGLSL

Sequences:

>Translated_684_residues
MVDTTKKSVAKSLTADMRRSAKRLSKQMRKASLTEEEATRNLARLETPDQKRKYVADMQIIDKLEDGFRGEISYKMLGNK
QLRVDSPKELTREHGIIRKTRKVLKRNAETGNVYLGLHEKKTWRSVSSHLYAEDGTLRAKHVKYKDGRFEEKWERDENGL
LFRTQFVNRNRLFQPISEKVSTPYRSGPENRLFRELTRRKGSKQETFERDEKGNLELIGSKRLGFSKNSTKAVDRQTSQT
TIRKLGGAFSKSYRSLLDTEGNELGRDISSHRRLFNKRSAVYDEASGQLTSTKHTFGKIYKSETAYLNADIKKVSKKILG
VTVRRKLTTLSEQEHDAQKLRNSESIEHRKAWQERAVIPRSPPRETANVDSAPQSHLVNSLRDGRRDEAEPRVVPAKDRR
LEGVIQNSPLFRQPNSERRVGSQTLPPSSNVRASDPVFPREGAKSEKGPVAVNLQRDNEREKQEEKNLSERRGNLFRSSR
SITETSFPGSPERITMLGSRRASINPSADPQSPVGRTDSQAPPMSLFPINNHQSDPNEQELLSFLHSVPVPPPLEVHGAP
GGRVEDSLRGASGDSLVRTSSVSESVFDEHSQGPLERDHSTNATSERFDPQALFGEPGLSRVSETRPELSMQGDHLTNSE
QQALLNELLSVPLPGPLPKADHERPRVLESSRSRERSMSGGLSL
>Mature_684_residues
MVDTTKKSVAKSLTADMRRSAKRLSKQMRKASLTEEEATRNLARLETPDQKRKYVADMQIIDKLEDGFRGEISYKMLGNK
QLRVDSPKELTREHGIIRKTRKVLKRNAETGNVYLGLHEKKTWRSVSSHLYAEDGTLRAKHVKYKDGRFEEKWERDENGL
LFRTQFVNRNRLFQPISEKVSTPYRSGPENRLFRELTRRKGSKQETFERDEKGNLELIGSKRLGFSKNSTKAVDRQTSQT
TIRKLGGAFSKSYRSLLDTEGNELGRDISSHRRLFNKRSAVYDEASGQLTSTKHTFGKIYKSETAYLNADIKKVSKKILG
VTVRRKLTTLSEQEHDAQKLRNSESIEHRKAWQERAVIPRSPPRETANVDSAPQSHLVNSLRDGRRDEAEPRVVPAKDRR
LEGVIQNSPLFRQPNSERRVGSQTLPPSSNVRASDPVFPREGAKSEKGPVAVNLQRDNEREKQEEKNLSERRGNLFRSSR
SITETSFPGSPERITMLGSRRASINPSADPQSPVGRTDSQAPPMSLFPINNHQSDPNEQELLSFLHSVPVPPPLEVHGAP
GGRVEDSLRGASGDSLVRTSSVSESVFDEHSQGPLERDHSTNATSERFDPQALFGEPGLSRVSETRPELSMQGDHLTNSE
QQALLNELLSVPLPGPLPKADHERPRVLESSRSRERSMSGGLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77241; Mature: 77241

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTTKKSVAKSLTADMRRSAKRLSKQMRKASLTEEEATRNLARLETPDQKRKYVADMQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IDKLEDGFRGEISYKMLGNKQLRVDSPKELTREHGIIRKTRKVLKRNAETGNVYLGLHEK
HHHHHCCCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
KTWRSVSSHLYAEDGTLRAKHVKYKDGRFEEKWERDENGLLFRTQFVNRNRLFQPISEKV
HHHHHHHHHEECCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
STPYRSGPENRLFRELTRRKGSKQETFERDEKGNLELIGSKRLGFSKNSTKAVDRQTSQT
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
TIRKLGGAFSKSYRSLLDTEGNELGRDISSHRRLFNKRSAVYDEASGQLTSTKHTFGKIY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KSETAYLNADIKKVSKKILGVTVRRKLTTLSEQEHDAQKLRNSESIEHRKAWQERAVIPR
HCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
SPPRETANVDSAPQSHLVNSLRDGRRDEAEPRVVPAKDRRLEGVIQNSPLFRQPNSERRV
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCHHHHC
GSQTLPPSSNVRASDPVFPREGAKSEKGPVAVNLQRDNEREKQEEKNLSERRGNLFRSSR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
SITETSFPGSPERITMLGSRRASINPSADPQSPVGRTDSQAPPMSLFPINNHQSDPNEQE
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHH
LLSFLHSVPVPPPLEVHGAPGGRVEDSLRGASGDSLVRTSSVSESVFDEHSQGPLERDHS
HHHHHHHCCCCCCCEECCCCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCC
TNATSERFDPQALFGEPGLSRVSETRPELSMQGDHLTNSEQQALLNELLSVPLPGPLPKA
CCCCHHCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
DHERPRVLESSRSRERSMSGGLSL
CCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVDTTKKSVAKSLTADMRRSAKRLSKQMRKASLTEEEATRNLARLETPDQKRKYVADMQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IDKLEDGFRGEISYKMLGNKQLRVDSPKELTREHGIIRKTRKVLKRNAETGNVYLGLHEK
HHHHHCCCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
KTWRSVSSHLYAEDGTLRAKHVKYKDGRFEEKWERDENGLLFRTQFVNRNRLFQPISEKV
HHHHHHHHHEECCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
STPYRSGPENRLFRELTRRKGSKQETFERDEKGNLELIGSKRLGFSKNSTKAVDRQTSQT
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
TIRKLGGAFSKSYRSLLDTEGNELGRDISSHRRLFNKRSAVYDEASGQLTSTKHTFGKIY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KSETAYLNADIKKVSKKILGVTVRRKLTTLSEQEHDAQKLRNSESIEHRKAWQERAVIPR
HCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
SPPRETANVDSAPQSHLVNSLRDGRRDEAEPRVVPAKDRRLEGVIQNSPLFRQPNSERRV
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCHHHHC
GSQTLPPSSNVRASDPVFPREGAKSEKGPVAVNLQRDNEREKQEEKNLSERRGNLFRSSR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
SITETSFPGSPERITMLGSRRASINPSADPQSPVGRTDSQAPPMSLFPINNHQSDPNEQE
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHH
LLSFLHSVPVPPPLEVHGAPGGRVEDSLRGASGDSLVRTSSVSESVFDEHSQGPLERDHS
HHHHHHHCCCCCCCEECCCCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCC
TNATSERFDPQALFGEPGLSRVSETRPELSMQGDHLTNSEQQALLNELLSVPLPGPLPKA
CCCCHHCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
DHERPRVLESSRSRERSMSGGLSL
CCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA