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The map label for this gene is hsdS [C]

Identifier: 160903326

GI number: 160903326

Start: 2098608

End: 2099909

Strand: Direct

Name: hsdS [C]

Synonym: Pmob_1897

Alternate gene names: 160903326

Gene position: 2098608-2099909 (Clockwise)

Preceding gene: 160903325

Following gene: 160903327

Centisome position: 96.73

GC content: 34.56

Gene sequence:

>1302_bases
ATGGAATTAGATCTTTACCAGAAAGAAGAATACAAAGAGACAGAACTCGGCTTGCTACCGAAAGATTGGGAAGTTGTGAG
GTTGGGGGAGGTTTCTGAACTTCAACAAGGTAAGACTCCTAAAAGAGATGATTATGAAGATTATAAAGGTTATAGAATTA
TAAAGGTAAAGGATTATGAAAATGAAAATAAAATATCAAATATAATAAAGGGGGATAGAAGTTTTGTAAAAACAGATTTT
GGGGAAAGATGCAGAATTAAAGAAGGGGATAGTCTTATACTTTCTGCCGCGCATTCTTCTAATATCGTAGGTCAAAAAAT
AGGATATGTCAAAGAAATACCAAGTCAAAAAACTTTTTTTGTAGCTGAATTGATAAGAGTAAGACCTAAAAAAAACATCA
TTCCTTATTTCTGCTTTTTATCTCTTATTTTGATGAGTTCCAGAAACCAGATTAGGGAAGAAGTTAAAGGAGGTCATCTA
TATCCTAAAAATTTAGGAAAAATAAGAATTCCCCTCCCTCCGCTCTCTGAACAAAAAAAGATTGCCTATGTCCTCTCTTC
AGTACAAGAGGCAAAGGAGAAGACTGAGGATGTTATAAAAGCAACAAAAGAACTCAAAAAGTCTATGATGAATCACCTGT
TTACTTATGGGCCTGTAAGTTTGGAAGAAGTTGAAAAAGTACCACTTAAAGAAACGGAGATCGGATTGGTGCCTGAAGAG
TGGGAAGTTAAAAACTTTGGGGAAATAGTTGAAATTAGAAAAGAAATTATCGACCCTTCAAACGGGAATTATATTTATGT
TGGATTAGAGCACATTGAATCGGGAAATATAAAGCTTCGAAAAACTGGTCTAAGTAAGGGAGTAAAAAGCGCAAAGTATA
AAATCTATCCAAATGATATCCTTTATGCAAAATTGAGGCCTTATTTAGACAAAGGTATTCTGGTGGAACAAGAGGGTATT
TGCTCAACAGATCTTCTTGTATTTAAAGCAAAAGAAAATGTATATGCAAGTTTCATAGCGTATTTAGAACATACAAATTA
TTTTAGAGAATATGCAATTAAAACAATGACCGGAGTGAATCACCCAAGAACTTCTTGGCGTGCGCTTAGTCAACTTACCA
TTCCACTCCCTCCCCTCTCTGAACAAAAAAAGATCGCTTCAATTCTCTCAGCGATCGATCAAAAAATTGAGGCGGAAGAG
AGCAAGAAAAAAGCCCTTGAAGATCTCTTTAAATCGCTTTTACATAATCTTATGACCGCAAAAATAAGGGTAAATCATTT
GGAGAATGTTTTCGATGAATAA

Upstream 100 bases:

>100_bases
CACTGCCTTTGGAGGATGCTGTTGTGCAGTTAAAAGAGGCAGAAGAAGAAAGAAAAGAAGCCGATGAAAAATTAGAGATT
ATTTTAAAAGAGATGGGATT

Downstream 100 bases:

>100_bases
AAAATAATTTTTTCTTACTTTTGCCAAAAGCAAAGAGAAAATATTATTAATTTAGTGGAGAAAAAAGTGAGAAAGTGGTG
GTGTAGCTATGGGCTTGGGA

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MELDLYQKEEYKETELGLLPKDWEVVRLGEVSELQQGKTPKRDDYEDYKGYRIIKVKDYENENKISNIIKGDRSFVKTDF
GERCRIKEGDSLILSAAHSSNIVGQKIGYVKEIPSQKTFFVAELIRVRPKKNIIPYFCFLSLILMSSRNQIREEVKGGHL
YPKNLGKIRIPLPPLSEQKKIAYVLSSVQEAKEKTEDVIKATKELKKSMMNHLFTYGPVSLEEVEKVPLKETEIGLVPEE
WEVKNFGEIVEIRKEIIDPSNGNYIYVGLEHIESGNIKLRKTGLSKGVKSAKYKIYPNDILYAKLRPYLDKGILVEQEGI
CSTDLLVFKAKENVYASFIAYLEHTNYFREYAIKTMTGVNHPRTSWRALSQLTIPLPPLSEQKKIASILSAIDQKIEAEE
SKKKALEDLFKSLLHNLMTAKIRVNHLENVFDE

Sequences:

>Translated_433_residues
MELDLYQKEEYKETELGLLPKDWEVVRLGEVSELQQGKTPKRDDYEDYKGYRIIKVKDYENENKISNIIKGDRSFVKTDF
GERCRIKEGDSLILSAAHSSNIVGQKIGYVKEIPSQKTFFVAELIRVRPKKNIIPYFCFLSLILMSSRNQIREEVKGGHL
YPKNLGKIRIPLPPLSEQKKIAYVLSSVQEAKEKTEDVIKATKELKKSMMNHLFTYGPVSLEEVEKVPLKETEIGLVPEE
WEVKNFGEIVEIRKEIIDPSNGNYIYVGLEHIESGNIKLRKTGLSKGVKSAKYKIYPNDILYAKLRPYLDKGILVEQEGI
CSTDLLVFKAKENVYASFIAYLEHTNYFREYAIKTMTGVNHPRTSWRALSQLTIPLPPLSEQKKIASILSAIDQKIEAEE
SKKKALEDLFKSLLHNLMTAKIRVNHLENVFDE
>Mature_433_residues
MELDLYQKEEYKETELGLLPKDWEVVRLGEVSELQQGKTPKRDDYEDYKGYRIIKVKDYENENKISNIIKGDRSFVKTDF
GERCRIKEGDSLILSAAHSSNIVGQKIGYVKEIPSQKTFFVAELIRVRPKKNIIPYFCFLSLILMSSRNQIREEVKGGHL
YPKNLGKIRIPLPPLSEQKKIAYVLSSVQEAKEKTEDVIKATKELKKSMMNHLFTYGPVSLEEVEKVPLKETEIGLVPEE
WEVKNFGEIVEIRKEIIDPSNGNYIYVGLEHIESGNIKLRKTGLSKGVKSAKYKIYPNDILYAKLRPYLDKGILVEQEGI
CSTDLLVFKAKENVYASFIAYLEHTNYFREYAIKTMTGVNHPRTSWRALSQLTIPLPPLSEQKKIASILSAIDQKIEAEE
SKKKALEDLFKSLLHNLMTAKIRVNHLENVFDE

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 49838; Mature: 49838

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDLYQKEEYKETELGLLPKDWEVVRLGEVSELQQGKTPKRDDYEDYKGYRIIKVKDYE
CCCCCCCHHHCCHHHCCCCCCCCCEEECCCHHHHHCCCCCCCCCCHHHCCEEEEEEECCC
NENKISNIIKGDRSFVKTDFGERCRIKEGDSLILSAAHSSNIVGQKIGYVKEIPSQKTFF
CHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHH
VAELIRVRPKKNIIPYFCFLSLILMSSRNQIREEVKGGHLYPKNLGKIRIPLPPLSEQKK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHH
IAYVLSSVQEAKEKTEDVIKATKELKKSMMNHLFTYGPVSLEEVEKVPLKETEIGLVPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC
WEVKNFGEIVEIRKEIIDPSNGNYIYVGLEHIESGNIKLRKTGLSKGVKSAKYKIYPNDI
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCHHHCCCCCEEEECCCCE
LYAKLRPYLDKGILVEQEGICSTDLLVFKAKENVYASFIAYLEHTNYFREYAIKTMTGVN
EHHHHHHHHCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPRTSWRALSQLTIPLPPLSEQKKIASILSAIDQKIEAEESKKKALEDLFKSLLHNLMTA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIRVNHLENVFDE
HHHHHHHHHHHCC
>Mature Secondary Structure
MELDLYQKEEYKETELGLLPKDWEVVRLGEVSELQQGKTPKRDDYEDYKGYRIIKVKDYE
CCCCCCCHHHCCHHHCCCCCCCCCEEECCCHHHHHCCCCCCCCCCHHHCCEEEEEEECCC
NENKISNIIKGDRSFVKTDFGERCRIKEGDSLILSAAHSSNIVGQKIGYVKEIPSQKTFF
CHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHH
VAELIRVRPKKNIIPYFCFLSLILMSSRNQIREEVKGGHLYPKNLGKIRIPLPPLSEQKK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHH
IAYVLSSVQEAKEKTEDVIKATKELKKSMMNHLFTYGPVSLEEVEKVPLKETEIGLVPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC
WEVKNFGEIVEIRKEIIDPSNGNYIYVGLEHIESGNIKLRKTGLSKGVKSAKYKIYPNDI
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCHHHCCCCCEEEECCCCE
LYAKLRPYLDKGILVEQEGICSTDLLVFKAKENVYASFIAYLEHTNYFREYAIKTMTGVN
EHHHHHHHHCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPRTSWRALSQLTIPLPPLSEQKKIASILSAIDQKIEAEESKKKALEDLFKSLLHNLMTA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIRVNHLENVFDE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]