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The map label for this gene is xynC [H]

Identifier: 160903281

GI number: 160903281

Start: 2035015

End: 2035845

Strand: Direct

Name: xynC [H]

Synonym: Pmob_1850

Alternate gene names: 160903281

Gene position: 2035015-2035845 (Clockwise)

Preceding gene: 160903280

Following gene: 160903282

Centisome position: 93.8

GC content: 36.1

Gene sequence:

>831_bases
TTGATACATGGAAAAGTATATGAATCTTTATCGTTTTATAGCCGAGCACTGAAAAGTGATGTGAAATATTCTATTTATCT
TCCACCTAAATACGACATTGAAACCAGGAAATATCCGACTATTTATCTTCTGCATGGACATGGAGGGAACGAAACGAGTT
GGCTAAGAAAAGGTCGAGTAGATCAAAGTTTGGATTTAATGATAACTAACAATGAAATTCCACCTTTTGTTGCCGTGATG
CCTGATGCTAAGAACAGTTGGTACGTTAATTCTCCAACTGGTGTTAACTATGAAACCGCTTTGATAGAGGACCTTCTTCA
ACATATAGAAACGCAGTACAAGGTTTATAACGAACGTTCTTCAAGATTCATAGCCGGTTTATCTATGGGAGGATACGGTG
CCTTAAGGTTGGCATTTAAGTATCCAGAGTTATTTTTGTCTGTTGCTAGTTTAAGTGGGGGAATAACCAGAGAAGTTCCC
CCAGAGAAAGAAGTCGATTTATATGGCAATGAAATTCATGTAAGAGAAGATTACTATCATGACGCATTTGGCTGGCCTTT
TGACCCAAAGTTTTGGGAGAAAGAGAATATTTTTAATTATATAGAAAACGTAAAACAAAGCGGCTTAGAGCTTCCAGTTT
ATCTTTCTTGTGGAAGTGAAGATTACTTTTACCTATATTTGGGTGCTTCTGAACTGCACCATGAATTAAGAATCAATGGC
ATATCTTCAACTCTTTTCATAAAACCAGGCGACCATAATTGGTTTCTTTGGAGCCAAGAAATAAAAGATGTATTAAGGTT
CTTTGCAAAAAATATGCTAATTATCCATTAA

Upstream 100 bases:

>100_bases
AAAGTAAAGGTCAATAAAATTACACCAGGTCCATTGTATGGTGAGGTTGTAAACAATCTTTACTGACGGCCTAATAGATA
GAAAAAAGGGGTGTTCACAT

Downstream 100 bases:

>100_bases
AGTAAGGAGTGAATTTATGGACCAAAAGAATGCCACCTATAGGTTAGTAATGAATTCGTTGTTTATAGTTCTATCCATAC
TTTTGTCAAGGTTATTAGCG

Product: putative esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIHGKVYESLSFYSRALKSDVKYSIYLPPKYDIETRKYPTIYLLHGHGGNETSWLRKGRVDQSLDLMITNNEIPPFVAVM
PDAKNSWYVNSPTGVNYETALIEDLLQHIETQYKVYNERSSRFIAGLSMGGYGALRLAFKYPELFLSVASLSGGITREVP
PEKEVDLYGNEIHVREDYYHDAFGWPFDPKFWEKENIFNYIENVKQSGLELPVYLSCGSEDYFYLYLGASELHHELRING
ISSTLFIKPGDHNWFLWSQEIKDVLRFFAKNMLIIH

Sequences:

>Translated_276_residues
MIHGKVYESLSFYSRALKSDVKYSIYLPPKYDIETRKYPTIYLLHGHGGNETSWLRKGRVDQSLDLMITNNEIPPFVAVM
PDAKNSWYVNSPTGVNYETALIEDLLQHIETQYKVYNERSSRFIAGLSMGGYGALRLAFKYPELFLSVASLSGGITREVP
PEKEVDLYGNEIHVREDYYHDAFGWPFDPKFWEKENIFNYIENVKQSGLELPVYLSCGSEDYFYLYLGASELHHELRING
ISSTLFIKPGDHNWFLWSQEIKDVLRFFAKNMLIIH
>Mature_276_residues
MIHGKVYESLSFYSRALKSDVKYSIYLPPKYDIETRKYPTIYLLHGHGGNETSWLRKGRVDQSLDLMITNNEIPPFVAVM
PDAKNSWYVNSPTGVNYETALIEDLLQHIETQYKVYNERSSRFIAGLSMGGYGALRLAFKYPELFLSVASLSGGITREVP
PEKEVDLYGNEIHVREDYYHDAFGWPFDPKFWEKENIFNYIENVKQSGLELPVYLSCGSEDYFYLYLGASELHHELRING
ISSTLFIKPGDHNWFLWSQEIKDVLRFFAKNMLIIH

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693201, Length=177, Percent_Identity=28.2485875706215, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 32067; Mature: 32067

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHGKVYESLSFYSRALKSDVKYSIYLPPKYDIETRKYPTIYLLHGHGGNETSWLRKGRV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCC
DQSLDLMITNNEIPPFVAVMPDAKNSWYVNSPTGVNYETALIEDLLQHIETQYKVYNERS
CCCEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRFIAGLSMGGYGALRLAFKYPELFLSVASLSGGITREVPPEKEVDLYGNEIHVREDYYH
CEEEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCC
DAFGWPFDPKFWEKENIFNYIENVKQSGLELPVYLSCGSEDYFYLYLGASELHHELRING
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHCCEEEEEC
ISSTLFIKPGDHNWFLWSQEIKDVLRFFAKNMLIIH
CCEEEEEECCCCCEEEEHHHHHHHHHHHHHCEEEEC
>Mature Secondary Structure
MIHGKVYESLSFYSRALKSDVKYSIYLPPKYDIETRKYPTIYLLHGHGGNETSWLRKGRV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCC
DQSLDLMITNNEIPPFVAVMPDAKNSWYVNSPTGVNYETALIEDLLQHIETQYKVYNERS
CCCEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRFIAGLSMGGYGALRLAFKYPELFLSVASLSGGITREVPPEKEVDLYGNEIHVREDYYH
CEEEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCC
DAFGWPFDPKFWEKENIFNYIENVKQSGLELPVYLSCGSEDYFYLYLGASELHHELRING
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHCCEEEEEC
ISSTLFIKPGDHNWFLWSQEIKDVLRFFAKNMLIIH
CCEEEEEECCCCCEEEEHHHHHHHHHHHHHCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]