| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160903243
Identifier: 160903243
GI number: 160903243
Start: 1992991
End: 1995618
Strand: Direct
Name: 160903243
Synonym: Pmob_1812
Alternate gene names: NA
Gene position: 1992991-1995618 (Clockwise)
Preceding gene: 160903242
Following gene: 160903244
Centisome position: 91.86
GC content: 34.44
Gene sequence:
>2628_bases ATGAGTGCTGATAAAGAAAAATTGTTGTCCGTTGCTATGATCGTCAAGGACGAAGAGACTAATATTAGACGTGCCTTAGA GGCTATTAAAGATGTGGCTGATGAGATAATCGTTGTTGATACAGGTTCAACAGATAGAACACCGGAGATAGTTAAAGAGT ATACCGATAAGTTGTACTTCCATGAATGGCAGAATGATTTTTCTGAGGCTCGAAATTATTCTTTGAAGTTTCCAACCTGT GAGTGGGTTTTGATATACGATGCGGACGAGGAGGCTTCAGAATCGTTTAAAAAAAATATAAGAGATTTTCTTATGAAGCA GCCAAAAGATGTTAATACCGTCTATATACCAACAATCAGTTATATGGATATTAACTACACAAGAACTGAAGTTGCTTCAA CTTCAAGAATTTTTAGAAAAGGTACCATTGAATACAAAAACGTTGTACATAATCAAGCTAAATATAAACCAAAGGTCGTT CGAGGTAATTTTCCAATTCTTCATTACGGTTACATCTGGACAAGGGCTTTGAAGAGAAAGAAGTATGAAAGAACAGGTAA TTTAATAAGAGAGCAACTAAAAGACGCAAAACACCCAATCGAGAGGTTATACTATTTAGTTCAGTTGTACAAAACAGAGT CTATCGGGGGGTATACGCATAAAAAGAACCAAGTTGCTTGGGAGACGTTGGCAGAGATAAAAAGGGTGGGAAAAGTTCCT GCCATAGGGCTTGAATTTTTGTACATGTTTGGATTGGACTGTATGTTTGCGGGTTTGAAAGACCTTGGAAGGGATTTGCT GCAAAAGTGTATAGATGCTACTCCTCAGTATCCTGACCCTTATTTTGGTATGATGGCTTTGTACGAAAGATCAAAAGATT GGGATGAGCTAAGCAAGTGGGGGGAAAAGTTTTTTAATGTCTTAGATGAAGCTATGAAAAATGTTGAGAATTTTGATTGG ACTATTATGTCTTTCAAGCAAGTGCCTTTGGCGCATATTTTGATGGCACGTGCAATGTTGAAAAGAAAGGATTTTGAAGG TTTCAACAATCATATTTCAATTGCATTTAGTGAAGATGAGAACATTAATATTGATAAAAAGAATTTGTATGTTTTGATGA ACGATATAAAAGAAAGTGTTGAAGCTAAAGATGAGTTTGAAAAGTTATTACCTGGATTAAGAGTTATGGTTGAAGGTGTA GAAAAATCAGGAATTGTTGTTTATTATGACAGCGTCGTTGAAAAAATTGCTGAATTAGAAGTTGAAGTCGATGAGGTTTT GTTAGATAAATTATCTTGTAGAAATGAACTTTCAAAATACATAATAAAGAAAATGAAAACATCAGAAGACAAACTTTTAG ATTTTATAACAAAAAGTGATTATCTTAATTTTGTAGAAAAAAACGGTATACCTGGACTTTTGCTTTTTTATTCTGTTTTG CAAAACACAAAAGATACTGTTGATACGTTGAAGACCCTTTCTAGTTTAAGAAAGATCGAAGATGAAAAGATTCAAGGAGT TTTATACGCCTTATTAGGAGATTGTTATCTGAGTTTGAAAAGGTTCAAAGAGGCTCTGAGTCAGTATAAAAAGTCTTTAG AAATACTTCCTGAGCTTTCACAGTTTATTAAACCTATAATTGAGGATTTGAGCACGAAATTAGACCCCGAGATGGATGGG GTTTACGAAGAGATGTATACCCATTTTGCTTCAGGGAAAGAGTTCATTTTCGATATAATGGGGTACGTTGGGCAAGAGAA CGCTGAAAAACTTTATCTTATTTCTGAAGCTCCATTGGCTTTGTACGTTTCGGGGGTATCTTTTATTCAAAAGGATGCAC AAAAGGCTGAAACGTTGTTGAAAAAAGTAGAAAATATCGACGAATTTCCTTTTTATTATTATAGGCTTGCTAAGATATAC GAAAAAAAAGATATTAAAAAAGCTTTTGAATATCATATAAAAGCTGTTGAGGAAAATAACAAACTCGCTGATTTGGCACT TGGTAGATACAGTTATTCTGGGCTTTATCCAAGTACTCAGATTAGTTTTATGAAAAGCAACGATGAAATGATTTGGGTAG GGAATATTTCCGAAAAGTTTTCCACGCTTGGAATCATTCATCCCATTAGGAGTTGGAAGAAATCAGAATCTTTTATGTAC GCTTCCCCTTATCCTTCTGATGAAGCTTTGAGGATTTACGAAGAACGTGAGAAAGAGGCTTACAAGTCTGCTCCTTTGGA GATCAAAAAGGAAGTTATTTTAAAGGGATTAATTGATAGTGATTTTAAAGATATCAAGCTTCTTGGGGTTGATAAAGAGA AGTATGAAAGTGTTTTTGAAGATTTGGGTGTTTCTGTGAAGGATACTTCTAACAATCTTTTAATTGTAGGTGAGTTTGAG AAAAATTATGATCTGTCTGATATTTTAAAGAAGGCAAAGAAGGTTTTAGCTTTTGCGTATGTTCCTGATTTAAAGGATAG AGAGAACGTGGTTTGGTTTATTCCGAAGTTTAGGGTGCTAAGAACAACGAGCCAGTTGATTTCGTTATTTGAGAAAGAAG GGTTTAAGGTTTCAAAAGTTGAGGCTATTGATGGAAATTTGAGATGTATTCAAGCATATAAAGAGTAA
Upstream 100 bases:
>100_bases TAAGGTAGTTTTTCTATGATTGGAGAAAGCCCCTTAAGGAATTAAATATATTGAACAAGAATGATATAATAGATGTAGCT TTTTGATGGGAGGAAAGTTT
Downstream 100 bases:
>100_bases TTTTTTTACTTTCATTGACAAGTTTTGAAATATAATGTATAATATTTTCGAAAAGTGTTTTCGGGGCGCTTAGCTCAGTG GGAGAGCGTCTGCTTCACGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 875; Mature: 874
Protein sequence:
>875_residues MSADKEKLLSVAMIVKDEETNIRRALEAIKDVADEIIVVDTGSTDRTPEIVKEYTDKLYFHEWQNDFSEARNYSLKFPTC EWVLIYDADEEASESFKKNIRDFLMKQPKDVNTVYIPTISYMDINYTRTEVASTSRIFRKGTIEYKNVVHNQAKYKPKVV RGNFPILHYGYIWTRALKRKKYERTGNLIREQLKDAKHPIERLYYLVQLYKTESIGGYTHKKNQVAWETLAEIKRVGKVP AIGLEFLYMFGLDCMFAGLKDLGRDLLQKCIDATPQYPDPYFGMMALYERSKDWDELSKWGEKFFNVLDEAMKNVENFDW TIMSFKQVPLAHILMARAMLKRKDFEGFNNHISIAFSEDENINIDKKNLYVLMNDIKESVEAKDEFEKLLPGLRVMVEGV EKSGIVVYYDSVVEKIAELEVEVDEVLLDKLSCRNELSKYIIKKMKTSEDKLLDFITKSDYLNFVEKNGIPGLLLFYSVL QNTKDTVDTLKTLSSLRKIEDEKIQGVLYALLGDCYLSLKRFKEALSQYKKSLEILPELSQFIKPIIEDLSTKLDPEMDG VYEEMYTHFASGKEFIFDIMGYVGQENAEKLYLISEAPLALYVSGVSFIQKDAQKAETLLKKVENIDEFPFYYYRLAKIY EKKDIKKAFEYHIKAVEENNKLADLALGRYSYSGLYPSTQISFMKSNDEMIWVGNISEKFSTLGIIHPIRSWKKSESFMY ASPYPSDEALRIYEEREKEAYKSAPLEIKKEVILKGLIDSDFKDIKLLGVDKEKYESVFEDLGVSVKDTSNNLLIVGEFE KNYDLSDILKKAKKVLAFAYVPDLKDRENVVWFIPKFRVLRTTSQLISLFEKEGFKVSKVEAIDGNLRCIQAYKE
Sequences:
>Translated_875_residues MSADKEKLLSVAMIVKDEETNIRRALEAIKDVADEIIVVDTGSTDRTPEIVKEYTDKLYFHEWQNDFSEARNYSLKFPTC EWVLIYDADEEASESFKKNIRDFLMKQPKDVNTVYIPTISYMDINYTRTEVASTSRIFRKGTIEYKNVVHNQAKYKPKVV RGNFPILHYGYIWTRALKRKKYERTGNLIREQLKDAKHPIERLYYLVQLYKTESIGGYTHKKNQVAWETLAEIKRVGKVP AIGLEFLYMFGLDCMFAGLKDLGRDLLQKCIDATPQYPDPYFGMMALYERSKDWDELSKWGEKFFNVLDEAMKNVENFDW TIMSFKQVPLAHILMARAMLKRKDFEGFNNHISIAFSEDENINIDKKNLYVLMNDIKESVEAKDEFEKLLPGLRVMVEGV EKSGIVVYYDSVVEKIAELEVEVDEVLLDKLSCRNELSKYIIKKMKTSEDKLLDFITKSDYLNFVEKNGIPGLLLFYSVL QNTKDTVDTLKTLSSLRKIEDEKIQGVLYALLGDCYLSLKRFKEALSQYKKSLEILPELSQFIKPIIEDLSTKLDPEMDG VYEEMYTHFASGKEFIFDIMGYVGQENAEKLYLISEAPLALYVSGVSFIQKDAQKAETLLKKVENIDEFPFYYYRLAKIY EKKDIKKAFEYHIKAVEENNKLADLALGRYSYSGLYPSTQISFMKSNDEMIWVGNISEKFSTLGIIHPIRSWKKSESFMY ASPYPSDEALRIYEEREKEAYKSAPLEIKKEVILKGLIDSDFKDIKLLGVDKEKYESVFEDLGVSVKDTSNNLLIVGEFE KNYDLSDILKKAKKVLAFAYVPDLKDRENVVWFIPKFRVLRTTSQLISLFEKEGFKVSKVEAIDGNLRCIQAYKE >Mature_874_residues SADKEKLLSVAMIVKDEETNIRRALEAIKDVADEIIVVDTGSTDRTPEIVKEYTDKLYFHEWQNDFSEARNYSLKFPTCE WVLIYDADEEASESFKKNIRDFLMKQPKDVNTVYIPTISYMDINYTRTEVASTSRIFRKGTIEYKNVVHNQAKYKPKVVR GNFPILHYGYIWTRALKRKKYERTGNLIREQLKDAKHPIERLYYLVQLYKTESIGGYTHKKNQVAWETLAEIKRVGKVPA IGLEFLYMFGLDCMFAGLKDLGRDLLQKCIDATPQYPDPYFGMMALYERSKDWDELSKWGEKFFNVLDEAMKNVENFDWT IMSFKQVPLAHILMARAMLKRKDFEGFNNHISIAFSEDENINIDKKNLYVLMNDIKESVEAKDEFEKLLPGLRVMVEGVE KSGIVVYYDSVVEKIAELEVEVDEVLLDKLSCRNELSKYIIKKMKTSEDKLLDFITKSDYLNFVEKNGIPGLLLFYSVLQ NTKDTVDTLKTLSSLRKIEDEKIQGVLYALLGDCYLSLKRFKEALSQYKKSLEILPELSQFIKPIIEDLSTKLDPEMDGV YEEMYTHFASGKEFIFDIMGYVGQENAEKLYLISEAPLALYVSGVSFIQKDAQKAETLLKKVENIDEFPFYYYRLAKIYE KKDIKKAFEYHIKAVEENNKLADLALGRYSYSGLYPSTQISFMKSNDEMIWVGNISEKFSTLGIIHPIRSWKKSESFMYA SPYPSDEALRIYEEREKEAYKSAPLEIKKEVILKGLIDSDFKDIKLLGVDKEKYESVFEDLGVSVKDTSNNLLIVGEFEK NYDLSDILKKAKKVLAFAYVPDLKDRENVVWFIPKFRVLRTTSQLISLFEKEGFKVSKVEAIDGNLRCIQAYKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 101743; Mature: 101612
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADKEKLLSVAMIVKDEETNIRRALEAIKDVADEIIVVDTGSTDRTPEIVKEYTDKLYF CCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH HEWQNDFSEARNYSLKFPTCEWVLIYDADEEASESFKKNIRDFLMKQPKDVNTVYIPTIS HHHHHHHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE YMDINYTRTEVASTSRIFRKGTIEYKNVVHNQAKYKPKVVRGNFPILHYGYIWTRALKRK EEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHH KYERTGNLIREQLKDAKHPIERLYYLVQLYKTESIGGYTHKKNQVAWETLAEIKRVGKVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC AIGLEFLYMFGLDCMFAGLKDLGRDLLQKCIDATPQYPDPYFGMMALYERSKDWDELSKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHH GEKFFNVLDEAMKNVENFDWTIMSFKQVPLAHILMARAMLKRKDFEGFNNHISIAFSEDE HHHHHHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC NINIDKKNLYVLMNDIKESVEAKDEFEKLLPGLRVMVEGVEKSGIVVYYDSVVEKIAELE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH VEVDEVLLDKLSCRNELSKYIIKKMKTSEDKLLDFITKSDYLNFVEKNGIPGLLLFYSVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QNTKDTVDTLKTLSSLRKIEDEKIQGVLYALLGDCYLSLKRFKEALSQYKKSLEILPELS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFIKPIIEDLSTKLDPEMDGVYEEMYTHFASGKEFIFDIMGYVGQENAEKLYLISEAPLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCE LYVSGVSFIQKDAQKAETLLKKVENIDEFPFYYYRLAKIYEKKDIKKAFEYHIKAVEENN EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLADLALGRYSYSGLYPSTQISFMKSNDEMIWVGNISEKFSTLGIIHPIRSWKKSESFMY CCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEE ASPYPSDEALRIYEEREKEAYKSAPLEIKKEVILKGLIDSDFKDIKLLGVDKEKYESVFE ECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH DLGVSVKDTSNNLLIVGEFEKNYDLSDILKKAKKVLAFAYVPDLKDRENVVWFIPKFRVL HCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH RTTSQLISLFEKEGFKVSKVEAIDGNLRCIQAYKE HHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHCC >Mature Secondary Structure SADKEKLLSVAMIVKDEETNIRRALEAIKDVADEIIVVDTGSTDRTPEIVKEYTDKLYF CCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH HEWQNDFSEARNYSLKFPTCEWVLIYDADEEASESFKKNIRDFLMKQPKDVNTVYIPTIS HHHHHHHHHHCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE YMDINYTRTEVASTSRIFRKGTIEYKNVVHNQAKYKPKVVRGNFPILHYGYIWTRALKRK EEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHH KYERTGNLIREQLKDAKHPIERLYYLVQLYKTESIGGYTHKKNQVAWETLAEIKRVGKVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC AIGLEFLYMFGLDCMFAGLKDLGRDLLQKCIDATPQYPDPYFGMMALYERSKDWDELSKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHH GEKFFNVLDEAMKNVENFDWTIMSFKQVPLAHILMARAMLKRKDFEGFNNHISIAFSEDE HHHHHHHHHHHHHHHCCCCEEEHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC NINIDKKNLYVLMNDIKESVEAKDEFEKLLPGLRVMVEGVEKSGIVVYYDSVVEKIAELE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH VEVDEVLLDKLSCRNELSKYIIKKMKTSEDKLLDFITKSDYLNFVEKNGIPGLLLFYSVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QNTKDTVDTLKTLSSLRKIEDEKIQGVLYALLGDCYLSLKRFKEALSQYKKSLEILPELS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFIKPIIEDLSTKLDPEMDGVYEEMYTHFASGKEFIFDIMGYVGQENAEKLYLISEAPLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCE LYVSGVSFIQKDAQKAETLLKKVENIDEFPFYYYRLAKIYEKKDIKKAFEYHIKAVEENN EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLADLALGRYSYSGLYPSTQISFMKSNDEMIWVGNISEKFSTLGIIHPIRSWKKSESFMY CCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEE ASPYPSDEALRIYEEREKEAYKSAPLEIKKEVILKGLIDSDFKDIKLLGVDKEKYESVFE ECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH DLGVSVKDTSNNLLIVGEFEKNYDLSDILKKAKKVLAFAYVPDLKDRENVVWFIPKFRVL HCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH RTTSQLISLFEKEGFKVSKVEAIDGNLRCIQAYKE HHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8123787 [H]