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The map label for this gene is ssnA [H]

Identifier: 160903172

GI number: 160903172

Start: 1902912

End: 1904243

Strand: Direct

Name: ssnA [H]

Synonym: Pmob_1737

Alternate gene names: 160903172

Gene position: 1902912-1904243 (Clockwise)

Preceding gene: 160903171

Following gene: 160903173

Centisome position: 87.71

GC content: 36.34

Gene sequence:

>1332_bases
ATGTTGTTAATAGGTAACGCCACTGTTCTCACCTTTGACGAAGAAACTCCTATAATTAATAATGGTGCGGTGTTAATAGA
AGGCATAAAAATAAAAGAAATAGGAGAAACCGAAGTTTTACTTCAAAAATATCCAAACGCCGTTTTCAAAAACGCTCGAA
ATAAGGTTTTAATGCCTGGTTTAATAAACACTCACACCCACCTGTACAGTACTTTTGCCAGAGGAATGAATTCAAAAACT
GACATCCCCCCACAAAACTTCATAGAAATATTAGAAAAATTATGGTGGAGATTGGACAACACTTTAAACGAGGATGATAT
TTATTATAGTGCATTATTTGCAATTTTAGAGTGTATAAAAAACGGAGTTACCACCATTTTTGACCATCATGCTAGTTTTA
ATTATATAGATGGCAGTTTGGACATCATTGCACAAGCAGCAATGGAAGCTGGTATAAGGGCTAATCTTTGTTATGAAGTA
TCAGATAGACATGGTCAGACTAAAAGCGATGCATCTCTGAAAGAAAATGAAAGGTTTATTAGAAAGATTCAGGTTTCTCA
AAATGATAAGTTAGGTGGAATGATTGGGTTACATGCTTCTTTTACACTTGAAGATAGAACCTTAAATAAAGCTTCAGAAT
TAGCAGACGAGTTACACGTTCCGTTTCATATCCACGTTGCTGAGGGGAGAGAAGATTTACAGGACAGCGTAAAAAGAGGT
TACATGGGTGTAGTCGATAGATTAACGAAATTTAAAATATTAAGGCCACATACCTTAGCTGCTCATGGTGTTCATATCAA
GAAAGAAGAGATTCCTATGTTGAAGAAGAGTGGTGCCTGGGTTGTTCACAATCCAGAATCAAACATGGGGAACGCGGTAG
GAGCAGCTCCAATAAAAGATTTTTTTGATCACGAAATCCTAACCGGTCTGGGAACAGATGCTTATACACACGATATGTTC
GAAAGTATAAAGGTTGCAAACTTGCTCCAAAAACATCAATTGGGTGATCCACAAGCGGGGTGGAACGAAGTTTACAACAT
GGCCTTTAATAACAATATGCAAATTGTTTCCAACCTATTAGGTGTCGAAATTGGAAAAATAAAAGAAAATTTTCGTGCGG
ATTTAATAATAGTAGATTATATTCCACCAACTCCAATAGAAAAAGATAACGTTTATTCTCATATCCTTTTTGGAATGAAC
GGGGGAATGGTTGAAACTGTAATTATTGACGGCAAAATTATTATGGATGATCGGGAGGTGACGATTTTAGATTATGAAAG
AATACACAGGAGAACTAGGGAGCAAGCAAGAAGATTTTGGGAGAGATTCTGA

Upstream 100 bases:

>100_bases
ATGGTGAACTTGTTAAAGTTGATGAAAGAAAAATCATCGAAAAGGCTAATGAACTATCTAAAAGGATGCTCGAGGCCTAA
AAATTTGGAGGTAAATGAAG

Downstream 100 bases:

>100_bases
TGATTACTTTGCTCCCACCACATTGAAAGAAGCCACAGAGATTCTCGCAAAATACAGCCCCAACATCAAAATCATCGCAG
GGGGCACAGATCTTCTGGTG

Product: putative chlorohydrolase/aminohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MLLIGNATVLTFDEETPIINNGAVLIEGIKIKEIGETEVLLQKYPNAVFKNARNKVLMPGLINTHTHLYSTFARGMNSKT
DIPPQNFIEILEKLWWRLDNTLNEDDIYYSALFAILECIKNGVTTIFDHHASFNYIDGSLDIIAQAAMEAGIRANLCYEV
SDRHGQTKSDASLKENERFIRKIQVSQNDKLGGMIGLHASFTLEDRTLNKASELADELHVPFHIHVAEGREDLQDSVKRG
YMGVVDRLTKFKILRPHTLAAHGVHIKKEEIPMLKKSGAWVVHNPESNMGNAVGAAPIKDFFDHEILTGLGTDAYTHDMF
ESIKVANLLQKHQLGDPQAGWNEVYNMAFNNNMQIVSNLLGVEIGKIKENFRADLIIVDYIPPTPIEKDNVYSHILFGMN
GGMVETVIIDGKIIMDDREVTILDYERIHRRTREQARRFWERF

Sequences:

>Translated_443_residues
MLLIGNATVLTFDEETPIINNGAVLIEGIKIKEIGETEVLLQKYPNAVFKNARNKVLMPGLINTHTHLYSTFARGMNSKT
DIPPQNFIEILEKLWWRLDNTLNEDDIYYSALFAILECIKNGVTTIFDHHASFNYIDGSLDIIAQAAMEAGIRANLCYEV
SDRHGQTKSDASLKENERFIRKIQVSQNDKLGGMIGLHASFTLEDRTLNKASELADELHVPFHIHVAEGREDLQDSVKRG
YMGVVDRLTKFKILRPHTLAAHGVHIKKEEIPMLKKSGAWVVHNPESNMGNAVGAAPIKDFFDHEILTGLGTDAYTHDMF
ESIKVANLLQKHQLGDPQAGWNEVYNMAFNNNMQIVSNLLGVEIGKIKENFRADLIIVDYIPPTPIEKDNVYSHILFGMN
GGMVETVIIDGKIIMDDREVTILDYERIHRRTREQARRFWERF
>Mature_443_residues
MLLIGNATVLTFDEETPIINNGAVLIEGIKIKEIGETEVLLQKYPNAVFKNARNKVLMPGLINTHTHLYSTFARGMNSKT
DIPPQNFIEILEKLWWRLDNTLNEDDIYYSALFAILECIKNGVTTIFDHHASFNYIDGSLDIIAQAAMEAGIRANLCYEV
SDRHGQTKSDASLKENERFIRKIQVSQNDKLGGMIGLHASFTLEDRTLNKASELADELHVPFHIHVAEGREDLQDSVKRG
YMGVVDRLTKFKILRPHTLAAHGVHIKKEEIPMLKKSGAWVVHNPESNMGNAVGAAPIKDFFDHEILTGLGTDAYTHDMF
ESIKVANLLQKHQLGDPQAGWNEVYNMAFNNNMQIVSNLLGVEIGKIKENFRADLIIVDYIPPTPIEKDNVYSHILFGMN
GGMVETVIIDGKIIMDDREVTILDYERIHRRTREQARRFWERF

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATZ/TRZ family [H]

Homologues:

Organism=Homo sapiens, GI4758426, Length=416, Percent_Identity=24.0384615384615, Blast_Score=96, Evalue=9e-20,
Organism=Escherichia coli, GI87082177, Length=452, Percent_Identity=34.7345132743363, Blast_Score=270, Evalue=2e-73,
Organism=Caenorhabditis elegans, GI17540282, Length=269, Percent_Identity=27.8810408921933, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR017700 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 50266; Mature: 50266

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIGNATVLTFDEETPIINNGAVLIEGIKIKEIGETEVLLQKYPNAVFKNARNKVLMPG
CEEEECEEEEEECCCCCEEECCEEEEEEEEEEECCCHHHHHHHCCHHHHHCCCCCEECCC
LINTHTHLYSTFARGMNSKTDIPPQNFIEILEKLWWRLDNTLNEDDIYYSALFAILECIK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NGVTTIFDHHASFNYIDGSLDIIAQAAMEAGIRANLCYEVSDRHGQTKSDASLKENERFI
CCHHEEHHCCCCCEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH
RKIQVSQNDKLGGMIGLHASFTLEDRTLNKASELADELHVPFHIHVAEGREDLQDSVKRG
HHHHCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
YMGVVDRLTKFKILRPHTLAAHGVHIKKEEIPMLKKSGAWVVHNPESNMGNAVGAAPIKD
HHHHHHHHHHHEEECCCEEECCCEEEEHHHCCCEECCCCEEEECCCCCCCCCCCCCHHHH
FFDHEILTGLGTDAYTHDMFESIKVANLLQKHQLGDPQAGWNEVYNMAFNNNMQIVSNLL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHH
GVEIGKIKENFRADLIIVDYIPPTPIEKDNVYSHILFGMNGGMVETVIIDGKIIMDDREV
CCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEEEECCCCE
TILDYERIHRRTREQARRFWERF
EEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLIGNATVLTFDEETPIINNGAVLIEGIKIKEIGETEVLLQKYPNAVFKNARNKVLMPG
CEEEECEEEEEECCCCCEEECCEEEEEEEEEEECCCHHHHHHHCCHHHHHCCCCCEECCC
LINTHTHLYSTFARGMNSKTDIPPQNFIEILEKLWWRLDNTLNEDDIYYSALFAILECIK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NGVTTIFDHHASFNYIDGSLDIIAQAAMEAGIRANLCYEVSDRHGQTKSDASLKENERFI
CCHHEEHHCCCCCEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH
RKIQVSQNDKLGGMIGLHASFTLEDRTLNKASELADELHVPFHIHVAEGREDLQDSVKRG
HHHHCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
YMGVVDRLTKFKILRPHTLAAHGVHIKKEEIPMLKKSGAWVVHNPESNMGNAVGAAPIKD
HHHHHHHHHHHEEECCCEEECCCEEEEHHHCCCEECCCCEEEECCCCCCCCCCCCCHHHH
FFDHEILTGLGTDAYTHDMFESIKVANLLQKHQLGDPQAGWNEVYNMAFNNNMQIVSNLL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHH
GVEIGKIKENFRADLIIVDYIPPTPIEKDNVYSHILFGMNGGMVETVIIDGKIIMDDREV
CCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEEEECCCCE
TILDYERIHRRTREQARRFWERF
EEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7764507; 9278503; 10074077 [H]