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The map label for this gene is tsf

Identifier: 160903155

GI number: 160903155

Start: 1883865

End: 1884458

Strand: Direct

Name: tsf

Synonym: Pmob_1720

Alternate gene names: 160903155

Gene position: 1883865-1884458 (Clockwise)

Preceding gene: 160903154

Following gene: 160903156

Centisome position: 86.83

GC content: 33.33

Gene sequence:

>594_bases
GTGGACGTATCAATTGAAAAGATAAAGAATCTTAGAGCTTCAACAGGGGCAGGAATGTTAGATTGTAAAAATGCTTTGGA
AGAGGCTGATGGAGATATAGATAAAGCCGTAGAAATCCTGAGAAAGAAAGGTGCCATAAAAGCTGCTAAAAAAGCCGGAA
GAGTCACCAACGAAGGTATCGTGTATTCTTATATTCATCATAATGAAAAGATAGGTGTTCTTCTATTATTAGGATGTGAA
ACTGATTTTGTGGCAAGGACTGAGGATTTCCACGATTTAGCTAAAAAGATTTCTTTACAAATTGCTTCGATGAATCCAAA
ATGGATTTCAAGGGAAGATGTACCTCAAGAAATTATCGATAAAGAAAAAGAAATTTACCTTGAAGAGTTAAAAAATTCCA
ACAAGCCTGAGAATATTAAAGAACAAATTGTAGAAAACAAATTAGGAAAATTCTACAGTGAAAATTGTCTTCTTGAACAA
GAATATGTTTTTGGAGAAGGGGAAAGTATCAAAGACATTATTGATTCGATGATTGCTAAGGTAGGAGAAAATATAACAGT
GGATAAATTTGCAAGATTTGCAATTGGTGAATGA

Upstream 100 bases:

>100_bases
CAATTAATTGTGTTAAAATAAATTAGTTTTAGCCAACGGTTGAGATTTCAAATACTCAAATTTATTAAACATTAATAATA
AGCATTAGGAGGTATTATAA

Downstream 100 bases:

>100_bases
TAAAAAGGTGGAGTCTTCCGCCTTTTTGCTTTATTTATGGAGTATAAAATTTTTCTTTCAACTATAAGGCTGCATGCTCT
TATTTAAAAGGAGGCCCTAT

Product: translation elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDVSIEKIKNLRASTGAGMLDCKNALEEADGDIDKAVEILRKKGAIKAAKKAGRVTNEGIVYSYIHHNEKIGVLLLLGCE
TDFVARTEDFHDLAKKISLQIASMNPKWISREDVPQEIIDKEKEIYLEELKNSNKPENIKEQIVENKLGKFYSENCLLEQ
EYVFGEGESIKDIIDSMIAKVGENITVDKFARFAIGE

Sequences:

>Translated_197_residues
MDVSIEKIKNLRASTGAGMLDCKNALEEADGDIDKAVEILRKKGAIKAAKKAGRVTNEGIVYSYIHHNEKIGVLLLLGCE
TDFVARTEDFHDLAKKISLQIASMNPKWISREDVPQEIIDKEKEIYLEELKNSNKPENIKEQIVENKLGKFYSENCLLEQ
EYVFGEGESIKDIIDSMIAKVGENITVDKFARFAIGE
>Mature_197_residues
MDVSIEKIKNLRASTGAGMLDCKNALEEADGDIDKAVEILRKKGAIKAAKKAGRVTNEGIVYSYIHHNEKIGVLLLLGCE
TDFVARTEDFHDLAKKISLQIASMNPKWISREDVPQEIIDKEKEIYLEELKNSNKPENIKEQIVENKLGKFYSENCLLEQ
EYVFGEGESIKDIIDSMIAKVGENITVDKFARFAIGE

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Escherichia coli, GI1786366, Length=96, Percent_Identity=48.9583333333333, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_PETMO (A9BIS5)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001568736.1
- ProteinModelPortal:   A9BIS5
- SMR:   A9BIS5
- GeneID:   5757497
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_1720
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- BioCyc:   PMOB403833:PMOB_1720-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 22150; Mature: 22150

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSIEKIKNLRASTGAGMLDCKNALEEADGDIDKAVEILRKKGAIKAAKKAGRVTNEGI
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCE
VYSYIHHNEKIGVLLLLGCETDFVARTEDFHDLAKKISLQIASMNPKWISREDVPQEIID
EEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
KEKEIYLEELKNSNKPENIKEQIVENKLGKFYSENCLLEQEYVFGEGESIKDIIDSMIAK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHH
VGENITVDKFARFAIGE
HCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDVSIEKIKNLRASTGAGMLDCKNALEEADGDIDKAVEILRKKGAIKAAKKAGRVTNEGI
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCE
VYSYIHHNEKIGVLLLLGCETDFVARTEDFHDLAKKISLQIASMNPKWISREDVPQEIID
EEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
KEKEIYLEELKNSNKPENIKEQIVENKLGKFYSENCLLEQEYVFGEGESIKDIIDSMIAK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHH
VGENITVDKFARFAIGE
HCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA