| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is yvqJ [H]
Identifier: 160902982
GI number: 160902982
Start: 1670218
End: 1671456
Strand: Direct
Name: yvqJ [H]
Synonym: Pmob_1539
Alternate gene names: 160902982
Gene position: 1670218-1671456 (Clockwise)
Preceding gene: 160902981
Following gene: 160902988
Centisome position: 76.98
GC content: 35.67
Gene sequence:
>1239_bases ATGTCAAAATCAACCGGCGGGTTACAACTTTTAATAAAAAACCGTGATTTTCTACTTCTGTTCTTCGGTAGGCTAGTATC CAGTGTCGGATCTGCTATTTTTATTATAGCTATTCTTTGGTCAGCCGCAGCTGAGATAGGCGGGGTGGGTGCAGTTAGTA CTGTTTTAAGTACTATAGCTGTTACGAATATTATTTTTTCTCCTTTTGCAGGTGTTTGGGCAGATAGATGGAAAAAGAAA AATATTCTTGTGATAACAGATTTAATCAGTGGCGGAATCCTTATTTTACTGGGTATTTTCTTTGGAACATATTTCTATCA AATTTGGGTATTGATAATAACCATTTTTGGATTACAGATCTGTGGTACTTTATTTGGTCCTGCGTTGTTGTCGTTAATCC CGATTATGATAAACGATAATGAGCTTTCTCAAGCTAATGCCATGATTTCAATGACAGATAGGCTTTCTCAACTTATTGGG ATGGCTATTGGTGGTGTGATTGTGTCTTTAGTGGGAATAAAATGGGCAATTTTAATCGATGGGATGACTTTTATTTTCTC GGCAGTCTCTGAAATGTTCATAAAAGCGGAAGAAAAAGGCAGAAAAGAAGAGGAAGCTAGAAAAAATGGGATGATTTTTT CAGATATAAAAGAAGGTTTCAAAGTGATATGGTCCAATGTTCAACTTAAAGGGTTAATAACCTTAGAGACATTAGATGAT TTTTTTGGAACCACGATATTCGTTTTCCTACCTGTATTGGCTAGTGAAATACTGAAAGTAGGTCCTGGTGAGTATGGAAT TATGCAAACAATGTTGGGAGCAGGATCTTTTATTTCCGCACTTGTTCTATCATCAATTAAAGAGATAAAAATGAAGTACC TGGCACTGATGCTATCCTCCGTTTTGGCAGGAGTATTTCTGGCTTCTCTTGGTATAGTTAACAGTTATATATACGTCTTG ATTGCCTTGTTGATGTTGGGTGTTATGACTGAGATAGGAAATATCAATGAAAATCTTTTGATTCAAAGAATTACCCCTGA AAACACAAGGGGACGGGTTTTTGCGTTGCGATCAACGATAGATAATTCGCTGAGACCTTTTTCTTATGCTTTTGCAGGGA TAATGGCAACATTTTTTTCATTGAAAAGTTTGTTCTTTGTGTTTGGAATAATAACTAGCATACTTGGAATATTTTATCTA TTGATACCTTATCAATTGAAAAAGCGGAATGTTTCATAA
Upstream 100 bases:
>100_bases TTAAAAATTTTAATAAAATACTTGACTTTCTTGAAGTTCTATTTTATAATCTTTGTAGAATATTTATTATTATATTCAAA ATCTTAAAGGGGGAGATAAA
Downstream 100 bases:
>100_bases AAATTTGACGTTCATTAGAAAATATGATATAATTTTCCTGGAGTAAACCGGAGCGTAGCGCAGTTGGTAGCGCGTCAGCA TGGGGTGTTGAAGGTCGCTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSKSTGGLQLLIKNRDFLLLFFGRLVSSVGSAIFIIAILWSAAAEIGGVGAVSTVLSTIAVTNIIFSPFAGVWADRWKKK NILVITDLISGGILILLGIFFGTYFYQIWVLIITIFGLQICGTLFGPALLSLIPIMINDNELSQANAMISMTDRLSQLIG MAIGGVIVSLVGIKWAILIDGMTFIFSAVSEMFIKAEEKGRKEEEARKNGMIFSDIKEGFKVIWSNVQLKGLITLETLDD FFGTTIFVFLPVLASEILKVGPGEYGIMQTMLGAGSFISALVLSSIKEIKMKYLALMLSSVLAGVFLASLGIVNSYIYVL IALLMLGVMTEIGNINENLLIQRITPENTRGRVFALRSTIDNSLRPFSYAFAGIMATFFSLKSLFFVFGIITSILGIFYL LIPYQLKKRNVS
Sequences:
>Translated_412_residues MSKSTGGLQLLIKNRDFLLLFFGRLVSSVGSAIFIIAILWSAAAEIGGVGAVSTVLSTIAVTNIIFSPFAGVWADRWKKK NILVITDLISGGILILLGIFFGTYFYQIWVLIITIFGLQICGTLFGPALLSLIPIMINDNELSQANAMISMTDRLSQLIG MAIGGVIVSLVGIKWAILIDGMTFIFSAVSEMFIKAEEKGRKEEEARKNGMIFSDIKEGFKVIWSNVQLKGLITLETLDD FFGTTIFVFLPVLASEILKVGPGEYGIMQTMLGAGSFISALVLSSIKEIKMKYLALMLSSVLAGVFLASLGIVNSYIYVL IALLMLGVMTEIGNINENLLIQRITPENTRGRVFALRSTIDNSLRPFSYAFAGIMATFFSLKSLFFVFGIITSILGIFYL LIPYQLKKRNVS >Mature_411_residues SKSTGGLQLLIKNRDFLLLFFGRLVSSVGSAIFIIAILWSAAAEIGGVGAVSTVLSTIAVTNIIFSPFAGVWADRWKKKN ILVITDLISGGILILLGIFFGTYFYQIWVLIITIFGLQICGTLFGPALLSLIPIMINDNELSQANAMISMTDRLSQLIGM AIGGVIVSLVGIKWAILIDGMTFIFSAVSEMFIKAEEKGRKEEEARKNGMIFSDIKEGFKVIWSNVQLKGLITLETLDDF FGTTIFVFLPVLASEILKVGPGEYGIMQTMLGAGSFISALVLSSIKEIKMKYLALMLSSVLAGVFLASLGIVNSYIYVLI ALLMLGVMTEIGNINENLLIQRITPENTRGRVFALRSTIDNSLRPFSYAFAGIMATFFSLKSLFFVFGIITSILGIFYLL IPYQLKKRNVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45101; Mature: 44969
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSTGGLQLLIKNRDFLLLFFGRLVSSVGSAIFIIAILWSAAAEIGGVGAVSTVLSTIA CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VTNIIFSPFAGVWADRWKKKNILVITDLISGGILILLGIFFGTYFYQIWVLIITIFGLQI HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGTLFGPALLSLIPIMINDNELSQANAMISMTDRLSQLIGMAIGGVIVSLVGIKWAILID HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMTFIFSAVSEMFIKAEEKGRKEEEARKNGMIFSDIKEGFKVIWSNVQLKGLITLETLDD HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHH FFGTTIFVFLPVLASEILKVGPGEYGIMQTMLGAGSFISALVLSSIKEIKMKYLALMLSS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLAGVFLASLGIVNSYIYVLIALLMLGVMTEIGNINENLLIQRITPENTRGRVFALRSTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEHHHH DNSLRPFSYAFAGIMATFFSLKSLFFVFGIITSILGIFYLLIPYQLKKRNVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKSTGGLQLLIKNRDFLLLFFGRLVSSVGSAIFIIAILWSAAAEIGGVGAVSTVLSTIA CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VTNIIFSPFAGVWADRWKKKNILVITDLISGGILILLGIFFGTYFYQIWVLIITIFGLQI HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGTLFGPALLSLIPIMINDNELSQANAMISMTDRLSQLIGMAIGGVIVSLVGIKWAILID HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMTFIFSAVSEMFIKAEEKGRKEEEARKNGMIFSDIKEGFKVIWSNVQLKGLITLETLDD HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHH FFGTTIFVFLPVLASEILKVGPGEYGIMQTMLGAGSFISALVLSSIKEIKMKYLALMLSS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLAGVFLASLGIVNSYIYVLIALLMLGVMTEIGNINENLLIQRITPENTRGRVFALRSTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEHHHH DNSLRPFSYAFAGIMATFFSLKSLFFVFGIITSILGIFYLLIPYQLKKRNVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]