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The map label for this gene is yjiR [C]

Identifier: 160902914

GI number: 160902914

Start: 1583714

End: 1584955

Strand: Direct

Name: yjiR [C]

Synonym: Pmob_1469

Alternate gene names: 160902914

Gene position: 1583714-1584955 (Clockwise)

Preceding gene: 160902912

Following gene: 160902915

Centisome position: 73.0

GC content: 36.71

Gene sequence:

>1242_bases
ATGAACTACGAAAAAAAGTTTTCAAAAGTTGCAAAAACGGCGAAAGCAAGCATTATAAGGGAATTATTGAAGGTAGCTTC
TGAGCCTGAAACGATATCGTTTGGTGGGGGTGTACCTGATCCAGAGACTTTTCCTCGAGAAGAATTAGGAGAAATTGCGG
CAAAAATTGTTAAAGAAGAATACAAAATAACACTACAGTATGGTCCTACCGAGGGAGATAACGAATTAAAAAACGCTTAT
ATAAATCTACTAAAAAAACACGAAGGAATAGAAGGGGTATCTCCGGAGAATATGTTGATAACTGTTGGTTCCCAGCAAGC
CCTACAATTGATAGGTCTAGCACTGCTCGATGAAGATTCTTACTGTGCTGTAGGAAAACCAGTTTATTTGGGTGCAGTCA
GCGCTTTTAGACAAATGTTTCCTAAATTTATGGAAATACCTTTAGAAGATGATGGAATGAATGTTGATATCCTTGAAGAA
AAATTAGAAGAGTTAGTAACTAAGGGAGAAATAGATAAGTTTAAATTCGTTTACGTGGTGCCTACATTTCAAAATCCTGC
TGGGGTAACTATGTCGTTAGAAAAAAGAAAGAAATTAATTAACTTAGCACATAAATATGATTTTTTAATTCTCGAGGATG
ATCCTTATGGTTCGTTGAGATTTGAGGGAGAACCAATTCCGTCAATTTACTCTCTTGATCCAGAAAGAACGGTCTTATTA
AACACATTTTCTAAAATTTTGTGTCCAGGTCTGAGAATTGGGATAATTGTTGCATCAAAAGACTTATTAAGAAAGCTAAC
AATACTTAAACAAGGTGTAGATCTATGTACACCATCTTTGACCCAGAGACTAGCCGCTAGATACCTCCAAGCTCACGATA
GGATCGAACAGTTAAAACCCACATTAGAACTTTATAAATCAAAAAAAGATACGATGTTGAAGGCGTTAGAAGAGGAATTC
GGTGATATGCAAGGGGTAAGTTGGACTCGCCCGGAGGGTGGGCTCTTCATATGGTTAACTTTTCCAGAATGGGTAGATAC
TATGGAAATGTTTGAAGAAGCAAAGAAGAACAAAGTATTGTACGTTCCGGGAGAGGCATTTTATGTAAACGAGGTGGAAA
AAAATCACATGCGATTATCTTTCTGCCTTCCTTCACACGAAGAAATAAAAGAGGGTATAAGAAGATTGAGAAAAGTTGCA
GAAAATTATGTAAATGCGAATTCTATCCGTAGCAAATCCTAA

Upstream 100 bases:

>100_bases
GTCAATAAACGTCTGTAATCGTCTGTAACTGACTTTGACTTATCTCGATTATTTGATTATAATTGAGTTGTAGGATAAAT
AATGAAAAGGGGGGCAAATT

Downstream 100 bases:

>100_bases
AAAACTGATTATGGGAGGAGCTTTATGTATAAAATATTGGTCATAAATCCAGGTGCAACGTCTACAAAGCTCTCACTTTT
TGAGGATGAGAAAGAAGTAA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: AspB-1 [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNYEKKFSKVAKTAKASIIRELLKVASEPETISFGGGVPDPETFPREELGEIAAKIVKEEYKITLQYGPTEGDNELKNAY
INLLKKHEGIEGVSPENMLITVGSQQALQLIGLALLDEDSYCAVGKPVYLGAVSAFRQMFPKFMEIPLEDDGMNVDILEE
KLEELVTKGEIDKFKFVYVVPTFQNPAGVTMSLEKRKKLINLAHKYDFLILEDDPYGSLRFEGEPIPSIYSLDPERTVLL
NTFSKILCPGLRIGIIVASKDLLRKLTILKQGVDLCTPSLTQRLAARYLQAHDRIEQLKPTLELYKSKKDTMLKALEEEF
GDMQGVSWTRPEGGLFIWLTFPEWVDTMEMFEEAKKNKVLYVPGEAFYVNEVEKNHMRLSFCLPSHEEIKEGIRRLRKVA
ENYVNANSIRSKS

Sequences:

>Translated_413_residues
MNYEKKFSKVAKTAKASIIRELLKVASEPETISFGGGVPDPETFPREELGEIAAKIVKEEYKITLQYGPTEGDNELKNAY
INLLKKHEGIEGVSPENMLITVGSQQALQLIGLALLDEDSYCAVGKPVYLGAVSAFRQMFPKFMEIPLEDDGMNVDILEE
KLEELVTKGEIDKFKFVYVVPTFQNPAGVTMSLEKRKKLINLAHKYDFLILEDDPYGSLRFEGEPIPSIYSLDPERTVLL
NTFSKILCPGLRIGIIVASKDLLRKLTILKQGVDLCTPSLTQRLAARYLQAHDRIEQLKPTLELYKSKKDTMLKALEEEF
GDMQGVSWTRPEGGLFIWLTFPEWVDTMEMFEEAKKNKVLYVPGEAFYVNEVEKNHMRLSFCLPSHEEIKEGIRRLRKVA
ENYVNANSIRSKS
>Mature_413_residues
MNYEKKFSKVAKTAKASIIRELLKVASEPETISFGGGVPDPETFPREELGEIAAKIVKEEYKITLQYGPTEGDNELKNAY
INLLKKHEGIEGVSPENMLITVGSQQALQLIGLALLDEDSYCAVGKPVYLGAVSAFRQMFPKFMEIPLEDDGMNVDILEE
KLEELVTKGEIDKFKFVYVVPTFQNPAGVTMSLEKRKKLINLAHKYDFLILEDDPYGSLRFEGEPIPSIYSLDPERTVLL
NTFSKILCPGLRIGIIVASKDLLRKLTILKQGVDLCTPSLTQRLAARYLQAHDRIEQLKPTLELYKSKKDTMLKALEEEF
GDMQGVSWTRPEGGLFIWLTFPEWVDTMEMFEEAKKNKVLYVPGEAFYVNEVEKNHMRLSFCLPSHEEIKEGIRRLRKVA
ENYVNANSIRSKS

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=429, Percent_Identity=28.6713286713287, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI33469970, Length=429, Percent_Identity=28.6713286713287, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI56713256, Length=342, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI56713254, Length=342, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1790797, Length=383, Percent_Identity=26.1096605744125, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI1787710, Length=396, Percent_Identity=26.7676767676768, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1788722, Length=414, Percent_Identity=26.0869565217391, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI48994949, Length=390, Percent_Identity=23.0769230769231, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321000, Length=259, Percent_Identity=30.1158301158301, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6321929, Length=323, Percent_Identity=26.625386996904, Blast_Score=90, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6321236, Length=485, Percent_Identity=23.5051546391753, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21356535, Length=401, Percent_Identity=26.1845386533666, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI28573069, Length=360, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646114, Length=360, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28573067, Length=360, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28573065, Length=360, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 46900; Mature: 46900

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYEKKFSKVAKTAKASIIRELLKVASEPETISFGGGVPDPETFPREELGEIAAKIVKEE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
YKITLQYGPTEGDNELKNAYINLLKKHEGIEGVSPENMLITVGSQQALQLIGLALLDEDS
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
YCAVGKPVYLGAVSAFRQMFPKFMEIPLEDDGMNVDILEEKLEELVTKGEIDKFKFVYVV
CEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEE
PTFQNPAGVTMSLEKRKKLINLAHKYDFLILEDDPYGSLRFEGEPIPSIYSLDPERTVLL
ECCCCCCCCEEEHHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCCCCCCCCHHHHH
NTFSKILCPGLRIGIIVASKDLLRKLTILKQGVDLCTPSLTQRLAARYLQAHDRIEQLKP
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TLELYKSKKDTMLKALEEEFGDMQGVSWTRPEGGLFIWLTFPEWVDTMEMFEEAKKNKVL
HHHHHHCHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHCCCEE
YVPGEAFYVNEVEKNHMRLSFCLPSHEEIKEGIRRLRKVAENYVNANSIRSKS
EECCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNYEKKFSKVAKTAKASIIRELLKVASEPETISFGGGVPDPETFPREELGEIAAKIVKEE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
YKITLQYGPTEGDNELKNAYINLLKKHEGIEGVSPENMLITVGSQQALQLIGLALLDEDS
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
YCAVGKPVYLGAVSAFRQMFPKFMEIPLEDDGMNVDILEEKLEELVTKGEIDKFKFVYVV
CEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEE
PTFQNPAGVTMSLEKRKKLINLAHKYDFLILEDDPYGSLRFEGEPIPSIYSLDPERTVLL
ECCCCCCCCEEEHHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCCCCCCCCHHHHH
NTFSKILCPGLRIGIIVASKDLLRKLTILKQGVDLCTPSLTQRLAARYLQAHDRIEQLKP
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TLELYKSKKDTMLKALEEEFGDMQGVSWTRPEGGLFIWLTFPEWVDTMEMFEEAKKNKVL
HHHHHHCHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHCCCEE
YVPGEAFYVNEVEKNHMRLSFCLPSHEEIKEGIRRLRKVAENYVNANSIRSKS
EECCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]