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The map label for this gene is rimP

Identifier: 160902005

GI number: 160902005

Start: 576091

End: 576564

Strand: Direct

Name: rimP

Synonym: Pmob_0529

Alternate gene names: 160902005

Gene position: 576091-576564 (Clockwise)

Preceding gene: 160902004

Following gene: 160902006

Centisome position: 26.55

GC content: 31.65

Gene sequence:

>474_bases
ATGTTAACCAACAAAGAAATTAAACAGTTAATATGGGAAAAAGCCGATAATGTTGCTTCTAAGTTGGGTCTTGAAATTTT
TGATATTTTAATTAAAGGTAGTAATAAAAATAAAATTCTAGAGGTTGTGATCGATAAGGCAGACGGATACGTGTCCATAG
GAGATTGTGAAAGGTTTTCCAAAGCCTTTGACCCTTGGCTAGACGAAATTGACCTCTTTGACAAGAGTTATGAGTTAGTA
GTTAGTTCCCCTGGACTTGATAGAAAATTAAGAGGCAAAGCAGATTACGAAAGATTCAAAGGAAAATTAGCAAAATTCAT
TTTAAAGGGGAAAGAGACGAAACATCCTGTAGTAATTGGTTATATTGACGAGATATTGGAAGATCAAATTAAAATTACTG
AAAAAGATTCTGGAAAATTATTTAACATCGATTTAAACGAAATAGACAAAGCCAATTTAGAAATTGAATTGTAA

Upstream 100 bases:

>100_bases
TATCATAGAAGAAAATTAATTAACAAAATGAGTGCCGAGGGCTTTTCGCCCTCGAGCTTTTTTATAAAAAATATTTTTTG
GAACGAGAGGGGTGAATACC

Downstream 100 bases:

>100_bases
AATTTGAAAGATATGGGAGGTGTGGAACATTGAACTTAAACCTATTAGAAGCTTTAGACGCCTTGGAAAGAGATAAAGGT
ATAAGTAGGGACTCGTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFSKAFDPWLDEIDLFDKSYELV
VSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIGYIDEILEDQIKITEKDSGKLFNIDLNEIDKANLEIEL

Sequences:

>Translated_157_residues
MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFSKAFDPWLDEIDLFDKSYELV
VSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIGYIDEILEDQIKITEKDSGKLFNIDLNEIDKANLEIEL
>Mature_157_residues
MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFSKAFDPWLDEIDLFDKSYELV
VSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIGYIDEILEDQIKITEKDSGKLFNIDLNEIDKANLEIEL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PETMO (A9BH33)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001567586.1
- ProteinModelPortal:   A9BH33
- SMR:   A9BH33
- GeneID:   5756864
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_0529
- HOGENOM:   HBG668072
- OMA:   RENTYIG
- BioCyc:   PMOB403833:PMOB_0529-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17949; Mature: 17949

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCHHHHH
KAFDPWLDEIDLFDKSYELVVSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIG
HHHCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEH
YIDEILEDQIKITEKDSGKLFNIDLNEIDKANLEIEL
HHHHHHHHHEEEEECCCCEEEEEEHHHCCCCCEEEEC
>Mature Secondary Structure
MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCHHHHH
KAFDPWLDEIDLFDKSYELVVSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIG
HHHCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEH
YIDEILEDQIKITEKDSGKLFNIDLNEIDKANLEIEL
HHHHHHHHHEEEEECCCCEEEEEEHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA