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The map label for this gene is oppC [H]

Identifier: 160901968

GI number: 160901968

Start: 531692

End: 532525

Strand: Direct

Name: oppC [H]

Synonym: Pmob_0490

Alternate gene names: 160901968

Gene position: 531692-532525 (Clockwise)

Preceding gene: 160901967

Following gene: 160901969

Centisome position: 24.51

GC content: 35.49

Gene sequence:

>834_bases
ATGAATACAATAAAATTACTTTTGAAATCTCCAAAATTTTTAATAGGATTTGGCCTATTTATGTTTTTATTCTTAACTGC
CTTCATATACCCTGCTGTTTCACCAAAAGATCCATTGGAGATGGTTGGATTTATGTACGAGCCCCCTTCCTCAACTTACT
TGTTGGGAACAGATAACTTTGGAAGAGATGTATTTGTAGAGCTTATTCACGGAATGAAATCCTCGTTGATTATAGGATTA
ATTTCAGGTGTTATTGCAACAACAATAGGTATAACTATAGGCCTTTTTGCTGGCTACAAAGGAGGAACCACTGATAACAT
ATTAAATTCAATAACTAATATATTTTTAGTTATACCTCCATTCATAATACTGATATTGATTACGGTTAGTTTAAAAAGTA
GGTCCTTGTTTGTTATGGGATTAGTATTAGGAGTAACCTCTTGGCCATGGACTGCTCGTGCGGTCAGGGCGCAATCACTC
AGTTTAAGAAATAGGGAACATGTTGATATAGCCAGGTTAAACGGTGCCAGTACTGTAGAAATTATAATACGCGAAATAAT
GCCTTATATCTTATCTTATATATTCATGGCATTTATACTCCAAGTTGCCACTGGTATTTTAAACGAAGCAGGAATAAGTA
TGTTAGGACTGGGTCCAAGTAATATAGTTTCACTCGGTACAATGCTTTCATGGGCACTATTATTTGAGTCTGTTAGATCA
GGTGCCTGGTGGGCTTTTATACCTCCAGCTATAACCATAGCTTTAATCACTTTTTCGCTATATTTTATGAATTCGGGGAT
GGATGAATTATTCAATCCCAAACTTAGGAGTTGA

Upstream 100 bases:

>100_bases
ATAATAGCGATGATGGTTTTAATTGCTAATTTTATTTTGGATATGGTCTATGGACTAATAGATCCTAGAATTAAAGCTGC
GCAAACGGAGGAGGGTTAAT

Downstream 100 bases:

>100_bases
TGAGATTGGAATCTAAAAAGGTTATTTTAGAAGTTAACAATCTTAAAACCTACTATCAAACAAGGTTAGGAGAAAAAATA
AAGGCGGTTAACAGCGTTTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNTIKLLLKSPKFLIGFGLFMFLFLTAFIYPAVSPKDPLEMVGFMYEPPSSTYLLGTDNFGRDVFVELIHGMKSSLIIGL
ISGVIATTIGITIGLFAGYKGGTTDNILNSITNIFLVIPPFIILILITVSLKSRSLFVMGLVLGVTSWPWTARAVRAQSL
SLRNREHVDIARLNGASTVEIIIREIMPYILSYIFMAFILQVATGILNEAGISMLGLGPSNIVSLGTMLSWALLFESVRS
GAWWAFIPPAITIALITFSLYFMNSGMDELFNPKLRS

Sequences:

>Translated_277_residues
MNTIKLLLKSPKFLIGFGLFMFLFLTAFIYPAVSPKDPLEMVGFMYEPPSSTYLLGTDNFGRDVFVELIHGMKSSLIIGL
ISGVIATTIGITIGLFAGYKGGTTDNILNSITNIFLVIPPFIILILITVSLKSRSLFVMGLVLGVTSWPWTARAVRAQSL
SLRNREHVDIARLNGASTVEIIIREIMPYILSYIFMAFILQVATGILNEAGISMLGLGPSNIVSLGTMLSWALLFESVRS
GAWWAFIPPAITIALITFSLYFMNSGMDELFNPKLRS
>Mature_277_residues
MNTIKLLLKSPKFLIGFGLFMFLFLTAFIYPAVSPKDPLEMVGFMYEPPSSTYLLGTDNFGRDVFVELIHGMKSSLIIGL
ISGVIATTIGITIGLFAGYKGGTTDNILNSITNIFLVIPPFIILILITVSLKSRSLFVMGLVLGVTSWPWTARAVRAQSL
SLRNREHVDIARLNGASTVEIIIREIMPYILSYIFMAFILQVATGILNEAGISMLGLGPSNIVSLGTMLSWALLFESVRS
GAWWAFIPPAITIALITFSLYFMNSGMDELFNPKLRS

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=265, Percent_Identity=26.7924528301887, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1787760, Length=281, Percent_Identity=27.4021352313167, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789964, Length=248, Percent_Identity=31.8548387096774, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787498, Length=230, Percent_Identity=31.7391304347826, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789889, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787549, Length=220, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788505, Length=231, Percent_Identity=25.974025974026, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30446; Mature: 30446

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIKLLLKSPKFLIGFGLFMFLFLTAFIYPAVSPKDPLEMVGFMYEPPSSTYLLGTDNF
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCEEECCCCCEEEEECCCC
GRDVFVELIHGMKSSLIIGLISGVIATTIGITIGLFAGYKGGTTDNILNSITNIFLVIPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FIILILITVSLKSRSLFVMGLVLGVTSWPWTARAVRAQSLSLRNREHVDIARLNGASTVE
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
IIIREIMPYILSYIFMAFILQVATGILNEAGISMLGLGPSNIVSLGTMLSWALLFESVRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHC
GAWWAFIPPAITIALITFSLYFMNSGMDELFNPKLRS
CCCEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MNTIKLLLKSPKFLIGFGLFMFLFLTAFIYPAVSPKDPLEMVGFMYEPPSSTYLLGTDNF
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCEEECCCCCEEEEECCCC
GRDVFVELIHGMKSSLIIGLISGVIATTIGITIGLFAGYKGGTTDNILNSITNIFLVIPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FIILILITVSLKSRSLFVMGLVLGVTSWPWTARAVRAQSLSLRNREHVDIARLNGASTVE
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
IIIREIMPYILSYIFMAFILQVATGILNEAGISMLGLGPSNIVSLGTMLSWALLFESVRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHC
GAWWAFIPPAITIALITFSLYFMNSGMDELFNPKLRS
CCCEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]