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The map label for this gene is ycjN [C]

Identifier: 160901951

GI number: 160901951

Start: 510948

End: 512210

Strand: Direct

Name: ycjN [C]

Synonym: Pmob_0473

Alternate gene names: 160901951

Gene position: 510948-512210 (Clockwise)

Preceding gene: 160901941

Following gene: 160901952

Centisome position: 23.55

GC content: 36.58

Gene sequence:

>1263_bases
ATGAAAAAATTACTTGTTTTAATGTGTGTTTTGATTGTTAGTTTGTTCGTTTTTTCTGAAGAAGTTATAACTTTGAATTT
AATTGAAGCCTTTTCAAGCCCCTACAGAACACCTACCTTAAACAACATAATACAAATGTTCGAGACTTTGAATCCTGGAG
TAAAAATTAATGTTATCTCTCCACCATACGAAACAGCCTATCAAAAGATCAATTTAATGGTAAGTACAGAACAACCACTT
GATATTGTAGAGATAGGCGACTGGGATTTAAGTGCATTAGCTGCTATGGGGAAATTAGAAGATTTGACTCCCTATATCGA
GTCCTGGCCTGAAAAAGATGACATGGTCGAAGGAGTTTTAGAAGCCGCCAGCATTTACCAAGGTATCCCTTATTTGTTAC
CTCACGGCATTTTTGTAAAAGCACTCTTTTACAGACCAGATATTTTAGCAAAATACGGGATTGAAAACTATCCAAAAACA
ATGCCTGAATTGTACGAAATATCAAAGACATTAACAGAATCCGGCAAAAATCAGTATGGTTTCGCATTTAGAGGTAAGGG
TTATCCAACCGCGTTTATTGATATTGTTATCACTTCATTCTTTGATGATATAGATCCAAACAATATGTATTTAACTAAAT
CTGGTGAAATTATTTTTGAAGATCCAAGGGCTGTAGAAGCGTTAAATTTCTATGTTAGTTTGTATAAAGACACATCTCCA
AAAGATTCAATTAACTGGGGATGGGATGAACAAGTTAATTCGTTTGTTTCTGGCATAACACCTCTATTATTTCAAGATCC
TGACACCACTGGCATGCTAAACGAAATGCTTCAACCAGGCCAATATAAAACTGCCCCACTTCCCCTAGGAACAAGTGGAA
AAGCTTACCCTTCCTTTGGATTCGTTGGCTGGGGAATTCCTACATATTCAGAACATAAGGATTTGGCTTGGAAATTCATT
AAATTCGTTGCTTCAGCTGAAATAAACGGATATTGGAGCAAGAGTTATGGTGCTTTACCAGTATTAGAATCAGTTTATAC
GTACGATTCATATTTCAGCTCAGAAATTTTCGAAGGTTGGACCAGGATGTTTGACGATCCCGAACATTATCAATTTACTC
AGTACCCCTTAGATAATGAAAACTGGGGAAAGTGGAATGAATTCCAGGAAAAAACAATGCAGCAGGTGTTGCTCGGGCAA
CTTTCTGTGGAAAGTTGCTTAAAACAATGGACTGACTTTTGGAAAGATGCAGGCATTAAATAG

Upstream 100 bases:

>100_bases
ATTGTTTTTTGTATTATATCATGTTTATTTTTAAAATGTTCATCTTTTTCGCAGATATGATATAATTATACAAAACTTAT
TAAACTAGGGGGTGTGTTTT

Downstream 100 bases:

>100_bases
GTGGTTTAATTGAAACGAAGAAAATTCATTTTTTTCTTGTTATTACCCACTTTGTTATTAATATCTTTTATCATTTTATA
CCCCACTATCAGTGGGGTAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKKLLVLMCVLIVSLFVFSEEVITLNLIEAFSSPYRTPTLNNIIQMFETLNPGVKINVISPPYETAYQKINLMVSTEQPL
DIVEIGDWDLSALAAMGKLEDLTPYIESWPEKDDMVEGVLEAASIYQGIPYLLPHGIFVKALFYRPDILAKYGIENYPKT
MPELYEISKTLTESGKNQYGFAFRGKGYPTAFIDIVITSFFDDIDPNNMYLTKSGEIIFEDPRAVEALNFYVSLYKDTSP
KDSINWGWDEQVNSFVSGITPLLFQDPDTTGMLNEMLQPGQYKTAPLPLGTSGKAYPSFGFVGWGIPTYSEHKDLAWKFI
KFVASAEINGYWSKSYGALPVLESVYTYDSYFSSEIFEGWTRMFDDPEHYQFTQYPLDNENWGKWNEFQEKTMQQVLLGQ
LSVESCLKQWTDFWKDAGIK

Sequences:

>Translated_420_residues
MKKLLVLMCVLIVSLFVFSEEVITLNLIEAFSSPYRTPTLNNIIQMFETLNPGVKINVISPPYETAYQKINLMVSTEQPL
DIVEIGDWDLSALAAMGKLEDLTPYIESWPEKDDMVEGVLEAASIYQGIPYLLPHGIFVKALFYRPDILAKYGIENYPKT
MPELYEISKTLTESGKNQYGFAFRGKGYPTAFIDIVITSFFDDIDPNNMYLTKSGEIIFEDPRAVEALNFYVSLYKDTSP
KDSINWGWDEQVNSFVSGITPLLFQDPDTTGMLNEMLQPGQYKTAPLPLGTSGKAYPSFGFVGWGIPTYSEHKDLAWKFI
KFVASAEINGYWSKSYGALPVLESVYTYDSYFSSEIFEGWTRMFDDPEHYQFTQYPLDNENWGKWNEFQEKTMQQVLLGQ
LSVESCLKQWTDFWKDAGIK
>Mature_420_residues
MKKLLVLMCVLIVSLFVFSEEVITLNLIEAFSSPYRTPTLNNIIQMFETLNPGVKINVISPPYETAYQKINLMVSTEQPL
DIVEIGDWDLSALAAMGKLEDLTPYIESWPEKDDMVEGVLEAASIYQGIPYLLPHGIFVKALFYRPDILAKYGIENYPKT
MPELYEISKTLTESGKNQYGFAFRGKGYPTAFIDIVITSFFDDIDPNNMYLTKSGEIIFEDPRAVEALNFYVSLYKDTSP
KDSINWGWDEQVNSFVSGITPLLFQDPDTTGMLNEMLQPGQYKTAPLPLGTSGKAYPSFGFVGWGIPTYSEHKDLAWKFI
KFVASAEINGYWSKSYGALPVLESVYTYDSYFSSEIFEGWTRMFDDPEHYQFTQYPLDNENWGKWNEFQEKTMQQVLLGQ
LSVESCLKQWTDFWKDAGIK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=363, Percent_Identity=22.038567493113, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47998; Mature: 47998

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLVLMCVLIVSLFVFSEEVITLNLIEAFSSPYRTPTLNNIIQMFETLNPGVKINVIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
PPYETAYQKINLMVSTEQPLDIVEIGDWDLSALAAMGKLEDLTPYIESWPEKDDMVEGVL
CCHHHHHHHEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHH
EAASIYQGIPYLLPHGIFVKALFYRPDILAKYGIENYPKTMPELYEISKTLTESGKNQYG
HHHHHHCCCHHHHCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
FAFRGKGYPTAFIDIVITSFFDDIDPNNMYLTKSGEIIFEDPRAVEALNFYVSLYKDTSP
EEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHHHHHHEECCCCC
KDSINWGWDEQVNSFVSGITPLLFQDPDTTGMLNEMLQPGQYKTAPLPLGTSGKAYPSFG
CCCCCCCHHHHHHHHHHCCCHHEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FVGWGIPTYSEHKDLAWKFIKFVASAEINGYWSKSYGALPVLESVYTYDSYFSSEIFEGW
CEECCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
TRMFDDPEHYQFTQYPLDNENWGKWNEFQEKTMQQVLLGQLSVESCLKQWTDFWKDAGIK
HHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLLVLMCVLIVSLFVFSEEVITLNLIEAFSSPYRTPTLNNIIQMFETLNPGVKINVIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
PPYETAYQKINLMVSTEQPLDIVEIGDWDLSALAAMGKLEDLTPYIESWPEKDDMVEGVL
CCHHHHHHHEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHH
EAASIYQGIPYLLPHGIFVKALFYRPDILAKYGIENYPKTMPELYEISKTLTESGKNQYG
HHHHHHCCCHHHHCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
FAFRGKGYPTAFIDIVITSFFDDIDPNNMYLTKSGEIIFEDPRAVEALNFYVSLYKDTSP
EEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHHHHHHEECCCCC
KDSINWGWDEQVNSFVSGITPLLFQDPDTTGMLNEMLQPGQYKTAPLPLGTSGKAYPSFG
CCCCCCCHHHHHHHHHHCCCHHEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FVGWGIPTYSEHKDLAWKFIKFVASAEINGYWSKSYGALPVLESVYTYDSYFSSEIFEGW
CEECCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
TRMFDDPEHYQFTQYPLDNENWGKWNEFQEKTMQQVLLGQLSVESCLKQWTDFWKDAGIK
HHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA