| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is pulA [H]
Identifier: 160901552
GI number: 160901552
Start: 56209
End: 58908
Strand: Direct
Name: pulA [H]
Synonym: Pmob_0061
Alternate gene names: 160901552
Gene position: 56209-58908 (Clockwise)
Preceding gene: 160901551
Following gene: 160901553
Centisome position: 2.59
GC content: 37.44
Gene sequence:
>2700_bases ATGAGGAAAGTAGGTTACTTTTTGCTAGTATTCTTCTTAATTTCTTTGTTGTTAGGTTGTTCCGCGCAAGCAGATCAAGC CACACAAACTCAAGCTTTGCCTGAAGAGGTTGAAAGTACAAATCCTAACAATTTTGTAAGCCTTTCTGAAGGGAAAACCG CTGCTAACTTTGACGCACAGACCGTTTTGATCGTACACTATCACAGACCTGATGGTGATTATGAACCTTGGAATCTTTGG ATTTGGCCAAGTAAACCTGTTTCCAAAGAAGGCGCTAGATATTTATTTGAAGGTGAGGATAGTTTTGGTAAGTATGCGAT TGTCAAATTTGAGGAAAAACATGAGGAGTTGGGGTTCATTGTAAGAACAGATAGTTGGGAAAAAGATATTTCAATGGATA GATTCGTGAGTATACCTGAAAGCGGAGTTGCTGAAATATGGGTCTTATCTGGAGTAGAGAATTACTATACCGATCCTAAA AACCTTGACTTAAGTCCCCGAGTAAATGCAGCTATCATGGATTCTTTCGATGAAATAAAGGTTAGTCTAACGGTACCCTT TGATACAAAAGAGTGGGAAGGAAAAGTCCACTTTTATCAGGTCGATGGTTCTGATCCTATTGCCATGGATGTATCAGATG TTTATAAAACCGATCCCACCGATATTTCTGTTACCTCAAATATTACAATAAAACTAGCTAATCCAATATCTTCCCAGGAT GTGGATAAATTGTATAAAATAGATATAGAAGGATATGTATCAGAAAATTATGTGATTATGCGTAATATTTTAGATGAGGA AGTTTTTCATTACTATGGGAACGATTTAGGAGCGGTTTATTCTCCAGCTAAAACAGATTTTAAAGTATGGTCCCCAGTAT CCTCAGAAGCAAAGGTACTACTTTTCCATGATTATTTGGATGAAGAACCATATAAAGAAATTCCCATGTCAAAAAACGAT AACGGAGTTTGGCATGCCACTATGAACGGTGATTTAAAAGGGCAATATTATCTATATGAGTTCGTATCTTATGGCGAAAC AAGAAGAACAATAGATATTTATTCCACAGCTCTTGCCGTCAATTCCGCGAAATCAGCTATTATAGATTTGAATGATACAG ACCCAGTAGGTTGGAATAACGATACAAGACCTGTTCTTAAAAATCCTGAAGATGCAATTGTTTATGAAATTCATGTAAAA GATTTTACAATAGATGAAAGCTCTGGAGTTCCAGAAGAGTACAGGGGTAAATATCTTGGATTGACTGTAGACAATACACA ATCCCCCACAGGTGTGAAAACAGGATTATCACACCTAAAGGAACTTGGAGTTACTCACGTTCACATTATGCCTATTCAAG ATGCTGGTTCTTTAGATGAAACTAAATTCGATGAGCAATACGGTTGGGGATACGATCCCTTAGTGTACAATGTTCCAGAA GGTATTTATTCGACAGATCCATACGATCCATTAAAGAGAATAAATGAAGTGAAAACCGTAGTCAAAACTTTTCACGAAAA CGGTATAAGGGTTGTGATGGATGTTGTGTACAACCATACATACCAAGTCGGAAAGAATTCACCTTTCGATCAAACAGTTC CTTACTTCTATTACCGTACTGATCAATCTGGGAAATATACAAATGGATCTGGAGTGGGGAACGAAGTAGCCACGGAAAGG TTCATGGTGAGAAAATACATAGTAGATAGTTTAAAGTATTGGGTCGATGAGTATCATGTTGATGGATTCAGATTCGATTT ATTAGGTTTATTTGACAAAGAAACGGTAAAAACAATATCAGAAGAATTACATGCCCTACTACCAGACGTACTTTTGTATG GAGAACCATGGACTGGTGGCGGTCAAATAACGTTTGGCAAAGGAGACCAAAAAGGTTTAGAGGTAGCTGTATTCAACGAT GATGTTAGAGACGCTATTAGGGGAAGCGTATTTGAACCTGAGGTCAAAGGTTTTGGATTAGGGGCTGCAGGACAACAAAC AAAGATAAAAAGAGGTGTTGTCGGATCTATTGAATACGACAGCACAATAAGATCATGGGCACAAGACCCACAAGAAACTA TGAACTACGTTTCCAACCATGATAACCATACCTTATGGGATAAAAATGCACTTGCTCTCGGTGTAAAACCGTGGGAAGAA GAGTTAGACCCACAAACTTTAGAAACCTTAAAAGCCTCTCAAAAATTCTCCAATGCAATGATCTTAACGATGCAGGGTGT ACCCTTCTTACACGGTGGGGTGGATTTTGCAAGGACTAAGAACGGTAATCATAACCCATACAATGTTTTAGAACCAAACG TATACGACTGGAACAGGAAAAGCGAATTTTACGATATATTTGAGTATTACCAAGGTATGATAGAATTAAGAAAAGCTCAT CCTGCTTTTAGAATGACCAATAGTGAAGATATAATAGCTCACATTGAATTTTTCGAACTACCTAAAGAATATAGAAAAAC CGTTGCTTTTATCATAAAAGATAATGCAAACAACGATCCATGGAAAAATATTGTGGTTGTCTACAATGCAGAACCAGAAT CTTCTGTTCAAATCACACTACCTGAAGGCGAATGGAATTTAGTTGTAAATGAAAACACAGCTGGTACCGAAACACTGAAT GTAGTGGAAGGAACAATCGAAGTGTCACCTTTATCCGCTTACGTTTTATATCAAAACTAA
Upstream 100 bases:
>100_bases CCAAAATAGTAGAAAGAGAAACATAGAAGATATTATTATTTTTTTCTATATTGTGGAAACCTTTTCACTATATCACAACT TCAAAAGGAGGTCGGTATTT
Downstream 100 bases:
>100_bases TAAACTTTAGAAAATCAAAGGGGCGAATTTTTTCGCCCTTTTTTAATTCTTACAAATTGATAAAATGAATCGTTGATATC TAAGGTCATATATGTTAAAA
Product: pullulanase, type I
Products: NA
Alternate protein names: Alpha-dextrin endo-1,6-alpha-glucosidase; Pullulan 6-glucanohydrolase [H]
Number of amino acids: Translated: 899; Mature: 899
Protein sequence:
>899_residues MRKVGYFLLVFFLISLLLGCSAQADQATQTQALPEEVESTNPNNFVSLSEGKTAANFDAQTVLIVHYHRPDGDYEPWNLW IWPSKPVSKEGARYLFEGEDSFGKYAIVKFEEKHEELGFIVRTDSWEKDISMDRFVSIPESGVAEIWVLSGVENYYTDPK NLDLSPRVNAAIMDSFDEIKVSLTVPFDTKEWEGKVHFYQVDGSDPIAMDVSDVYKTDPTDISVTSNITIKLANPISSQD VDKLYKIDIEGYVSENYVIMRNILDEEVFHYYGNDLGAVYSPAKTDFKVWSPVSSEAKVLLFHDYLDEEPYKEIPMSKND NGVWHATMNGDLKGQYYLYEFVSYGETRRTIDIYSTALAVNSAKSAIIDLNDTDPVGWNNDTRPVLKNPEDAIVYEIHVK DFTIDESSGVPEEYRGKYLGLTVDNTQSPTGVKTGLSHLKELGVTHVHIMPIQDAGSLDETKFDEQYGWGYDPLVYNVPE GIYSTDPYDPLKRINEVKTVVKTFHENGIRVVMDVVYNHTYQVGKNSPFDQTVPYFYYRTDQSGKYTNGSGVGNEVATER FMVRKYIVDSLKYWVDEYHVDGFRFDLLGLFDKETVKTISEELHALLPDVLLYGEPWTGGGQITFGKGDQKGLEVAVFND DVRDAIRGSVFEPEVKGFGLGAAGQQTKIKRGVVGSIEYDSTIRSWAQDPQETMNYVSNHDNHTLWDKNALALGVKPWEE ELDPQTLETLKASQKFSNAMILTMQGVPFLHGGVDFARTKNGNHNPYNVLEPNVYDWNRKSEFYDIFEYYQGMIELRKAH PAFRMTNSEDIIAHIEFFELPKEYRKTVAFIIKDNANNDPWKNIVVVYNAEPESSVQITLPEGEWNLVVNENTAGTETLN VVEGTIEVSPLSAYVLYQN
Sequences:
>Translated_899_residues MRKVGYFLLVFFLISLLLGCSAQADQATQTQALPEEVESTNPNNFVSLSEGKTAANFDAQTVLIVHYHRPDGDYEPWNLW IWPSKPVSKEGARYLFEGEDSFGKYAIVKFEEKHEELGFIVRTDSWEKDISMDRFVSIPESGVAEIWVLSGVENYYTDPK NLDLSPRVNAAIMDSFDEIKVSLTVPFDTKEWEGKVHFYQVDGSDPIAMDVSDVYKTDPTDISVTSNITIKLANPISSQD VDKLYKIDIEGYVSENYVIMRNILDEEVFHYYGNDLGAVYSPAKTDFKVWSPVSSEAKVLLFHDYLDEEPYKEIPMSKND NGVWHATMNGDLKGQYYLYEFVSYGETRRTIDIYSTALAVNSAKSAIIDLNDTDPVGWNNDTRPVLKNPEDAIVYEIHVK DFTIDESSGVPEEYRGKYLGLTVDNTQSPTGVKTGLSHLKELGVTHVHIMPIQDAGSLDETKFDEQYGWGYDPLVYNVPE GIYSTDPYDPLKRINEVKTVVKTFHENGIRVVMDVVYNHTYQVGKNSPFDQTVPYFYYRTDQSGKYTNGSGVGNEVATER FMVRKYIVDSLKYWVDEYHVDGFRFDLLGLFDKETVKTISEELHALLPDVLLYGEPWTGGGQITFGKGDQKGLEVAVFND DVRDAIRGSVFEPEVKGFGLGAAGQQTKIKRGVVGSIEYDSTIRSWAQDPQETMNYVSNHDNHTLWDKNALALGVKPWEE ELDPQTLETLKASQKFSNAMILTMQGVPFLHGGVDFARTKNGNHNPYNVLEPNVYDWNRKSEFYDIFEYYQGMIELRKAH PAFRMTNSEDIIAHIEFFELPKEYRKTVAFIIKDNANNDPWKNIVVVYNAEPESSVQITLPEGEWNLVVNENTAGTETLN VVEGTIEVSPLSAYVLYQN >Mature_899_residues MRKVGYFLLVFFLISLLLGCSAQADQATQTQALPEEVESTNPNNFVSLSEGKTAANFDAQTVLIVHYHRPDGDYEPWNLW IWPSKPVSKEGARYLFEGEDSFGKYAIVKFEEKHEELGFIVRTDSWEKDISMDRFVSIPESGVAEIWVLSGVENYYTDPK NLDLSPRVNAAIMDSFDEIKVSLTVPFDTKEWEGKVHFYQVDGSDPIAMDVSDVYKTDPTDISVTSNITIKLANPISSQD VDKLYKIDIEGYVSENYVIMRNILDEEVFHYYGNDLGAVYSPAKTDFKVWSPVSSEAKVLLFHDYLDEEPYKEIPMSKND NGVWHATMNGDLKGQYYLYEFVSYGETRRTIDIYSTALAVNSAKSAIIDLNDTDPVGWNNDTRPVLKNPEDAIVYEIHVK DFTIDESSGVPEEYRGKYLGLTVDNTQSPTGVKTGLSHLKELGVTHVHIMPIQDAGSLDETKFDEQYGWGYDPLVYNVPE GIYSTDPYDPLKRINEVKTVVKTFHENGIRVVMDVVYNHTYQVGKNSPFDQTVPYFYYRTDQSGKYTNGSGVGNEVATER FMVRKYIVDSLKYWVDEYHVDGFRFDLLGLFDKETVKTISEELHALLPDVLLYGEPWTGGGQITFGKGDQKGLEVAVFND DVRDAIRGSVFEPEVKGFGLGAAGQQTKIKRGVVGSIEYDSTIRSWAQDPQETMNYVSNHDNHTLWDKNALALGVKPWEE ELDPQTLETLKASQKFSNAMILTMQGVPFLHGGVDFARTKNGNHNPYNVLEPNVYDWNRKSEFYDIFEYYQGMIELRKAH PAFRMTNSEDIIAHIEFFELPKEYRKTVAFIIKDNANNDPWKNIVVVYNAEPESSVQITLPEGEWNLVVNENTAGTETLN VVEGTIEVSPLSAYVLYQN
Specific function: Hydrolyzes The Alpha-1,6-Glucosidic Linkages In Glycogen Which Has First Been Partially Depolymerized By Phosphorylase. Shows Only Very Little Activity With Native Glycogen. [C]
COG id: COG1523
COG function: function code G; Type II secretory pathway, pullulanase PulA and related glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Escherichia coli, GI2367229, Length=596, Percent_Identity=24.6644295302013, Blast_Score=119, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR004193 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR005323 - InterPro: IPR011840 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02922 CBM_48; PF03714 PUD [H]
EC number: =3.2.1.41 [H]
Molecular weight: Translated: 102084; Mature: 102084
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVGYFLLVFFLISLLLGCSAQADQATQTQALPEEVESTNPNNFVSLSEGKTAANFDAQ CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCCCEEEECCCCEECCCCCE TVLIVHYHRPDGDYEPWNLWIWPSKPVSKEGARYLFEGEDSFGKYAIVKFEEKHEELGFI EEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEE VRTDSWEKDISMDRFVSIPESGVAEIWVLSGVENYYTDPKNLDLSPRVNAAIMDSFDEIK EECCCCCCCCCHHHEECCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCHHHHCCCCEEE VSLTVPFDTKEWEGKVHFYQVDGSDPIAMDVSDVYKTDPTDISVTSNITIKLANPISSQD EEEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHCCCCCCEEEECEEEEEEECCCCCCC VDKLYKIDIEGYVSENYVIMRNILDEEVFHYYGNDLGAVYSPAKTDFKVWSPVSSEAKVL CCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCEEE LFHDYLDEEPYKEIPMSKNDNGVWHATMNGDLKGQYYLYEFVSYGETRRTIDIYSTALAV EEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEHHCCCCCEEEEEEHHHHEE NSAKSAIIDLNDTDPVGWNNDTRPVLKNPEDAIVYEIHVKDFTIDESSGVPEEYRGKYLG CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHCCCEEE LTVDNTQSPTGVKTGLSHLKELGVTHVHIMPIQDAGSLDETKFDEQYGWGYDPLVYNVPE EEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHCCCCCCCEEEECCC GIYSTDPYDPLKRINEVKTVVKTFHENGIRVVMDVVYNHTYQVGKNSPFDQTVPYFYYRT CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCEEECCCCCCCCCCCCEEEEEE DQSGKYTNGSGVGNEVATERFMVRKYIVDSLKYWVDEYHVDGFRFDLLGLFDKETVKTIS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH EELHALLPDVLLYGEPWTGGGQITFGKGDQKGLEVAVFNDDVRDAIRGSVFEPEVKGFGL HHHHHHHHHHEEECCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCEEC GAAGQQTKIKRGVVGSIEYDSTIRSWAQDPQETMNYVSNHDNHTLWDKNALALGVKPWEE CCCCCCCHHHCCCEECEECHHHHHHHHCCHHHHHHHHHCCCCCEEECCCEEEECCCCHHH ELDPQTLETLKASQKFSNAMILTMQGVPFLHGGVDFARTKNGNHNPYNVLEPNVYDWNRK HCCHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCC SEFYDIFEYYQGMIELRKAHPAFRMTNSEDIIAHIEFFELPKEYRKTVAFIIKDNANNDP CHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHCCHHHHCEEEEEEECCCCCCC WKNIVVVYNAEPESSVQITLPEGEWNLVVNENTAGTETLNVVEGTIEVSPLSAYVLYQN CCEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEEEC >Mature Secondary Structure MRKVGYFLLVFFLISLLLGCSAQADQATQTQALPEEVESTNPNNFVSLSEGKTAANFDAQ CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCCCEEEECCCCEECCCCCE TVLIVHYHRPDGDYEPWNLWIWPSKPVSKEGARYLFEGEDSFGKYAIVKFEEKHEELGFI EEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEE VRTDSWEKDISMDRFVSIPESGVAEIWVLSGVENYYTDPKNLDLSPRVNAAIMDSFDEIK EECCCCCCCCCHHHEECCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCHHHHCCCCEEE VSLTVPFDTKEWEGKVHFYQVDGSDPIAMDVSDVYKTDPTDISVTSNITIKLANPISSQD EEEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHCCCCCCEEEECEEEEEEECCCCCCC VDKLYKIDIEGYVSENYVIMRNILDEEVFHYYGNDLGAVYSPAKTDFKVWSPVSSEAKVL CCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCEEE LFHDYLDEEPYKEIPMSKNDNGVWHATMNGDLKGQYYLYEFVSYGETRRTIDIYSTALAV EEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEHHCCCCCEEEEEEHHHHEE NSAKSAIIDLNDTDPVGWNNDTRPVLKNPEDAIVYEIHVKDFTIDESSGVPEEYRGKYLG CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHCCCEEE LTVDNTQSPTGVKTGLSHLKELGVTHVHIMPIQDAGSLDETKFDEQYGWGYDPLVYNVPE EEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHCCCCCCCEEEECCC GIYSTDPYDPLKRINEVKTVVKTFHENGIRVVMDVVYNHTYQVGKNSPFDQTVPYFYYRT CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCEEECCCCCCCCCCCCEEEEEE DQSGKYTNGSGVGNEVATERFMVRKYIVDSLKYWVDEYHVDGFRFDLLGLFDKETVKTIS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH EELHALLPDVLLYGEPWTGGGQITFGKGDQKGLEVAVFNDDVRDAIRGSVFEPEVKGFGL HHHHHHHHHHEEECCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCEEC GAAGQQTKIKRGVVGSIEYDSTIRSWAQDPQETMNYVSNHDNHTLWDKNALALGVKPWEE CCCCCCCHHHCCCEECEECHHHHHHHHCCHHHHHHHHHCCCCCEEECCCEEEECCCCHHH ELDPQTLETLKASQKFSNAMILTMQGVPFLHGGVDFARTKNGNHNPYNVLEPNVYDWNRK HCCHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCC SEFYDIFEYYQGMIELRKAHPAFRMTNSEDIIAHIEFFELPKEYRKTVAFIIKDNANNDP CHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHCCHHHHCEEEEEEECCCCCCC WKNIVVVYNAEPESSVQITLPEGEWNLVVNENTAGTETLNVVEGTIEVSPLSAYVLYQN CCEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9453151; 10360571 [H]