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The map label for this gene is ycjN [C]

Identifier: 160901518

GI number: 160901518

Start: 23726

End: 24967

Strand: Direct

Name: ycjN [C]

Synonym: Pmob_0027

Alternate gene names: 160901518

Gene position: 23726-24967 (Clockwise)

Preceding gene: 160901515

Following gene: 160901519

Centisome position: 1.09

GC content: 38.89

Gene sequence:

>1242_bases
ATGAAAAAAGTAGTTGTTTTATTTGCTATATTGACGATGGTGTTGAGTGCCTTTTCTATTACCATTACAATGACAGCGGG
TGCAGTAGGAAGGGAATTAGAAGTTCTCAATGAACAAGTTGAGATGTTTATGAAAGAAAACCCAGACATAACGGTAAATG
TTCTTCCAATGCCCAACAGCTCTACGGATAGGCACGATCTTTACGTTACTTACTTAGCTTCAGGTACCCCTGATCCAGAT
GTATTAATGCTTGACGTTATCTGGCCAGCAGAATTTTCGCCATTCTTAGTAGATTTGACTGATGACTATGATTATTTTGG
ACTTGATGGATTTTTCCCTGGAACCGTTGCTTCAAATACCGTCGATGGCAGTTTGGTAGCAGTTCCTTGGTTTACTGATG
CAGGTATTCTTTATTACCGAAAAGATTTGTTGGAAAAGTACGGTTACGATGTTCCAGAAACATGGGATGAACTTTATACA
ATTGCAAAAGATATATCCCAGAAAGAAGGAATCGAAGGTTTTGTATGGCAAGGAGCCAGGTATGAAGGTTTAACCTGTGA
CGTTATGGAATTCGTCCATAGTTTTGGTGGAGAAATAATGAAAGATGGAGAAGTTGTCGTTGATGATCCTGAATATTACG
ATAACAATGTTGCAGCAATAACCTTTATGGATAAATTAATAGAAGATGGCGTAAGTCCAAGGGGAGTAACTACCTACATG
GAAGAAGAAGCTAGAAGAATTTTCCAAAATGGTGACGCAGTTTTTATGAGAAACTGGCCATACGCATGGTCCTTAGTTAA
CGCTCCCGAGTCACCAGTTGCTGGAAAAGTTGGTATAACGGTTCTTCCAAAAGGGCCCGAACCAGATGGAAGGAATTCTG
CTACTTTGGGTGGATGGAACCTTGGTATAAACGCAAACTCTTCTGCTGCAGAGGTAGAAGCTTCTAAAAAACTGATCAAA
TTCTTGCTTAGTAAAGAACAACAAGTTTACAAAGCGGTTTATTCAGGTCAAACACCAACTATGATCGAAGCATACAACGA
TCCAAGAACTATTGAAGCAAATCCTTTCTATGCTGATCTTTTAGATGTTTTCTTGAATGCTGAACCAAGACCAATTTCTC
CAATATATGCTGAAATTTCTTACGAGATACAAGTTGCTGTTCACGAAGTTTTAACGCAGCAAGCTGAACCTGAAGATGCT
CTAAACAACTTAGCAGAAAATCTCAAATCTATAGTTGAATGA

Upstream 100 bases:

>100_bases
CATATAATTACCTTTTGAGATGAAGGTTACATGTGATAAAATAACTAATGATTAATTTGTTTATTTAATTTATTATATCA
TATCAGGAGGTGGCAGTAGT

Downstream 100 bases:

>100_bases
AAAAGAAGAATTTGATATAATTTTCATAGGTGGGCGGTAAACGGAGTTCCTCCGTCTACCGCCTTTCTGTATAATATAGT
AGACTATAATTAGGGGGTGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKKVVVLFAILTMVLSAFSITITMTAGAVGRELEVLNEQVEMFMKENPDITVNVLPMPNSSTDRHDLYVTYLASGTPDPD
VLMLDVIWPAEFSPFLVDLTDDYDYFGLDGFFPGTVASNTVDGSLVAVPWFTDAGILYYRKDLLEKYGYDVPETWDELYT
IAKDISQKEGIEGFVWQGARYEGLTCDVMEFVHSFGGEIMKDGEVVVDDPEYYDNNVAAITFMDKLIEDGVSPRGVTTYM
EEEARRIFQNGDAVFMRNWPYAWSLVNAPESPVAGKVGITVLPKGPEPDGRNSATLGGWNLGINANSSAAEVEASKKLIK
FLLSKEQQVYKAVYSGQTPTMIEAYNDPRTIEANPFYADLLDVFLNAEPRPISPIYAEISYEIQVAVHEVLTQQAEPEDA
LNNLAENLKSIVE

Sequences:

>Translated_413_residues
MKKVVVLFAILTMVLSAFSITITMTAGAVGRELEVLNEQVEMFMKENPDITVNVLPMPNSSTDRHDLYVTYLASGTPDPD
VLMLDVIWPAEFSPFLVDLTDDYDYFGLDGFFPGTVASNTVDGSLVAVPWFTDAGILYYRKDLLEKYGYDVPETWDELYT
IAKDISQKEGIEGFVWQGARYEGLTCDVMEFVHSFGGEIMKDGEVVVDDPEYYDNNVAAITFMDKLIEDGVSPRGVTTYM
EEEARRIFQNGDAVFMRNWPYAWSLVNAPESPVAGKVGITVLPKGPEPDGRNSATLGGWNLGINANSSAAEVEASKKLIK
FLLSKEQQVYKAVYSGQTPTMIEAYNDPRTIEANPFYADLLDVFLNAEPRPISPIYAEISYEIQVAVHEVLTQQAEPEDA
LNNLAENLKSIVE
>Mature_413_residues
MKKVVVLFAILTMVLSAFSITITMTAGAVGRELEVLNEQVEMFMKENPDITVNVLPMPNSSTDRHDLYVTYLASGTPDPD
VLMLDVIWPAEFSPFLVDLTDDYDYFGLDGFFPGTVASNTVDGSLVAVPWFTDAGILYYRKDLLEKYGYDVPETWDELYT
IAKDISQKEGIEGFVWQGARYEGLTCDVMEFVHSFGGEIMKDGEVVVDDPEYYDNNVAAITFMDKLIEDGVSPRGVTTYM
EEEARRIFQNGDAVFMRNWPYAWSLVNAPESPVAGKVGITVLPKGPEPDGRNSATLGGWNLGINANSSAAEVEASKKLIK
FLLSKEQQVYKAVYSGQTPTMIEAYNDPRTIEANPFYADLLDVFLNAEPRPISPIYAEISYEIQVAVHEVLTQQAEPEDA
LNNLAENLKSIVE

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45958; Mature: 45958

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVVLFAILTMVLSAFSITITMTAGAVGRELEVLNEQVEMFMKENPDITVNVLPMPNS
CCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
STDRHDLYVTYLASGTPDPDVLMLDVIWPAEFSPFLVDLTDDYDYFGLDGFFPGTVASNT
CCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
VDGSLVAVPWFTDAGILYYRKDLLEKYGYDVPETWDELYTIAKDISQKEGIEGFVWQGAR
CCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC
YEGLTCDVMEFVHSFGGEIMKDGEVVVDDPEYYDNNVAAITFMDKLIEDGVSPRGVTTYM
CCCCCHHHHHHHHHCCCCEECCCCEEECCCCHHCCCEEEEHHHHHHHHCCCCCCCHHHHH
EEEARRIFQNGDAVFMRNWPYAWSLVNAPESPVAGKVGITVLPKGPEPDGRNSATLGGWN
HHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEECCEE
LGINANSSAAEVEASKKLIKFLLSKEQQVYKAVYSGQTPTMIEAYNDPRTIEANPFYADL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCHHHHH
LDVFLNAEPRPISPIYAEISYEIQVAVHEVLTQQAEPEDALNNLAENLKSIVE
HHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVVVLFAILTMVLSAFSITITMTAGAVGRELEVLNEQVEMFMKENPDITVNVLPMPNS
CCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
STDRHDLYVTYLASGTPDPDVLMLDVIWPAEFSPFLVDLTDDYDYFGLDGFFPGTVASNT
CCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
VDGSLVAVPWFTDAGILYYRKDLLEKYGYDVPETWDELYTIAKDISQKEGIEGFVWQGAR
CCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC
YEGLTCDVMEFVHSFGGEIMKDGEVVVDDPEYYDNNVAAITFMDKLIEDGVSPRGVTTYM
CCCCCHHHHHHHHHCCCCEECCCCEEECCCCHHCCCEEEEHHHHHHHHCCCCCCCHHHHH
EEEARRIFQNGDAVFMRNWPYAWSLVNAPESPVAGKVGITVLPKGPEPDGRNSATLGGWN
HHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEECCEE
LGINANSSAAEVEASKKLIKFLLSKEQQVYKAVYSGQTPTMIEAYNDPRTIEANPFYADL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCHHHHH
LDVFLNAEPRPISPIYAEISYEIQVAVHEVLTQQAEPEDALNNLAENLKSIVE
HHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]