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The map label for this gene is comF [H]

Identifier: 160901515

GI number: 160901515

Start: 21274

End: 21894

Strand: Direct

Name: comF [H]

Synonym: Pmob_0024

Alternate gene names: 160901515

Gene position: 21274-21894 (Clockwise)

Preceding gene: 160901514

Following gene: 160901518

Centisome position: 0.98

GC content: 31.4

Gene sequence:

>621_bases
ATGACCACAATTTTTGAACCTCACTGTCTTGTTTGCAAAAAACCTATTGCCTTTGGAGAACTTATTTGCGACAATTGCAA
AGAAAATCTTTATTCGCCTTCTCTTTCAAATGGTGCTTTTAAGGTTTATCATTATGGAAAATACGAGTATCCTTTGTCCA
ACTTAATAAAAGAGTTCAAATACCATTCACATCCAAAAATTGCCCGGCTTTTGGGGAATATGTTAGCAAAGTTTTTTATA
GATTTAAAATTTCCAGAACTAAATTATACTGTGTCATATGTACCTTCAAATTTCTCAAGTGTTCATGAAAAAGGCTTTGT
ACCTGCTCACTTAATTGCTCAGTATTTTTCAGACATCTTAGGCTTTCCCTTAATAAATCTCTTTTCCTCAAAAACTCTTA
AAAGACAAGTTCAATTGGATTATAAAAAGAGAAATGAAAACGTTAAAAACAAGATAAAATTGATTCAGGATCCCCCAAAG
AACATTATTATTATAGATGATGTGTACACTACAGGGGCTTCAATGAACGAAGTAGGTAATCTACTCATTAAGAAATGTGA
TGTTTTAATTGGCATCACTGTAGCAAAAGCTTATAGGTATTCTTTTAATAAATCTTTATAG

Upstream 100 bases:

>100_bases
ATACTCAAAGACCCTTACGAAAACGGGAATTTAAAACTTGCTGCGTTAAATGCACTTCTACGTCTAAATGCGGAGATGGT
AGTTAATTTTTAAAAAGATA

Downstream 100 bases:

>100_bases
TTTTTTATATCACAGATTGCACCAACATATTTTAATTTTTCTGCTGAAAATGCATTCCCTAACTTTGCAGCTTTTATAGG
ATCCAAACCTATAATCGTTC

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: DNA transformation protein ComF; Protein COM101A [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTTIFEPHCLVCKKPIAFGELICDNCKENLYSPSLSNGAFKVYHYGKYEYPLSNLIKEFKYHSHPKIARLLGNMLAKFFI
DLKFPELNYTVSYVPSNFSSVHEKGFVPAHLIAQYFSDILGFPLINLFSSKTLKRQVQLDYKKRNENVKNKIKLIQDPPK
NIIIIDDVYTTGASMNEVGNLLIKKCDVLIGITVAKAYRYSFNKSL

Sequences:

>Translated_206_residues
MTTIFEPHCLVCKKPIAFGELICDNCKENLYSPSLSNGAFKVYHYGKYEYPLSNLIKEFKYHSHPKIARLLGNMLAKFFI
DLKFPELNYTVSYVPSNFSSVHEKGFVPAHLIAQYFSDILGFPLINLFSSKTLKRQVQLDYKKRNENVKNKIKLIQDPPK
NIIIIDDVYTTGASMNEVGNLLIKKCDVLIGITVAKAYRYSFNKSL
>Mature_205_residues
TTIFEPHCLVCKKPIAFGELICDNCKENLYSPSLSNGAFKVYHYGKYEYPLSNLIKEFKYHSHPKIARLLGNMLAKFFID
LKFPELNYTVSYVPSNFSSVHEKGFVPAHLIAQYFSDILGFPLINLFSSKTLKRQVQLDYKKRNENVKNKIKLIQDPPKN
IIIIDDVYTTGASMNEVGNLLIKKCDVLIGITVAKAYRYSFNKSL

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 23616; Mature: 23485

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIFEPHCLVCKKPIAFGELICDNCKENLYSPSLSNGAFKVYHYGKYEYPLSNLIKEFK
CCCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
YHSHPKIARLLGNMLAKFFIDLKFPELNYTVSYVPSNFSSVHEKGFVPAHLIAQYFSDIL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH
GFPLINLFSSKTLKRQVQLDYKKRNENVKNKIKLIQDPPKNIIIIDDVYTTGASMNEVGN
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH
LLIKKCDVLIGITVAKAYRYSFNKSL
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTIFEPHCLVCKKPIAFGELICDNCKENLYSPSLSNGAFKVYHYGKYEYPLSNLIKEFK
CCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
YHSHPKIARLLGNMLAKFFIDLKFPELNYTVSYVPSNFSSVHEKGFVPAHLIAQYFSDIL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH
GFPLINLFSSKTLKRQVQLDYKKRNENVKNKIKLIQDPPKNIIIIDDVYTTGASMNEVGN
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH
LLIKKCDVLIGITVAKAYRYSFNKSL
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 1856167; 7542800 [H]